RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 ALG5Q9Y673 324 aa8.14□□□□□ -1.11
COPS7A-221ENST00000546229 IGKV2D-24A0A075B6R9 120 aa8.13□□□□□ -1.11
COPS7A-221ENST00000546229 FABP5P3A8MUU1 101 aa8.13□□□□□ -1.11
COPS7A-221ENST00000546229 B4DEV8 164 aa8.13□□□□□ -1.11
COPS7A-221ENST00000546229 PEX7O00628 323 aa8.13□□□□□ -1.11
COPS7A-221ENST00000546229 SH2D1AO60880 128 aa8.13□□□□□ -1.11
COPS7A-221ENST00000546229 ARMS2P0C7Q2 107 aa8.13□□□□□ -1.11
COPS7A-221ENST00000546229 FGF8P55075 233 aaPredicted RBP8.13□□□□□ -1.11
COPS7A-221ENST00000546229 UBE2D3P61077 147 aa8.13□□□□□ -1.11
COPS7A-221ENST00000546229 UBE2D2P62837 147 aa8.13□□□□□ -1.11
COPS7A-221ENST00000546229 A0A087WWL8 130 aa8.12□□□□□ -1.11
COPS7A-221ENST00000546229 RBFOX3A6NFN3 312 aa8.12□□□□□ -1.11
COPS7A-221ENST00000546229 FAM74A7A6NL05 159 aa8.12□□□□□ -1.11
COPS7A-221ENST00000546229 MBP02144 154 aa8.12□□□□□ -1.11
COPS7A-221ENST00000546229 S100A4P26447 101 aaKnown RBP8.12□□□□□ -1.11
COPS7A-221ENST00000546229 LINC01559Q495D7 138 aa8.12□□□□□ -1.11
COPS7A-221ENST00000546229 SERTAD4-AS1Q5TG53 156 aa8.12□□□□□ -1.11
COPS7A-221ENST00000546229 ENHOQ6UWT2 76 aa8.12□□□□□ -1.11
COPS7A-221ENST00000546229 OR10G8Q8NGN5 311 aa8.12□□□□□ -1.11
COPS7A-221ENST00000546229 RMI2Q96E14 147 aa8.12□□□□□ -1.11
COPS7A-221ENST00000546229 TRBV10-1A0A0K0K1A3 114 aa8.11□□□□□ -1.11
COPS7A-221ENST00000546229 G3V3Q6 166 aa8.11□□□□□ -1.11
COPS7A-221ENST00000546229 M0R036 132 aa8.11□□□□□ -1.11
COPS7A-221ENST00000546229 MT1HL1P0DM35 61 aa8.11□□□□□ -1.11
COPS7A-221ENST00000546229 ZNF674Q2M3X9 581 aa8.11□□□□□ -1.11
COPS7A-221ENST00000546229 RPL7L1Q6DKI1 246 aaKnown RBP8.11□□□□□ -1.11
COPS7A-221ENST00000546229 PRR27Q6MZM9 219 aa8.11□□□□□ -1.11
COPS7A-221ENST00000546229 KRTAP26-1Q6PEX3 210 aa8.11□□□□□ -1.11
COPS7A-221ENST00000546229 OR11H4Q8NGC9 324 aa8.11□□□□□ -1.11
COPS7A-221ENST00000546229 UBE2WQ96B02 151 aa8.11□□□□□ -1.11
COPS7A-221ENST00000546229 DAZAP1Q96EP5 407 aaKnown RBP8.11□□□□□ -1.11
COPS7A-221ENST00000546229 ACTR3CQ9C0K3 210 aaPredicted RBP8.11□□□□□ -1.11
COPS7A-221ENST00000546229 TRBV6-1A0A0K0K1D8 114 aa8.1□□□□□ -1.11
COPS7A-221ENST00000546229 CTXND1A0A1B0GTU2 59 aa8.1□□□□□ -1.11
COPS7A-221ENST00000546229 GRIFINA4D1Z8 144 aa8.1□□□□□ -1.11
COPS7A-221ENST00000546229 PANO1I0J062 215 aa8.1□□□□□ -1.11
COPS7A-221ENST00000546229 UBE2G2P60604 165 aa8.1□□□□□ -1.11
COPS7A-221ENST00000546229 MPV17L2Q567V2 206 aa8.1□□□□□ -1.11
COPS7A-221ENST00000546229 FAM74A4Q5TZK3 123 aa8.1□□□□□ -1.11
COPS7A-221ENST00000546229 LTAP01374 205 aa8.09□□□□□ -1.11
COPS7A-221ENST00000546229 DEFA1P59665 94 aa8.09□□□□□ -1.11
COPS7A-221ENST00000546229 DEFA3P59666 94 aa8.09□□□□□ -1.11
COPS7A-221ENST00000546229 FAM162BQ5T6X4 162 aa8.09□□□□□ -1.11
COPS7A-221ENST00000546229 SYT8Q8NBV8 401 aa8.09□□□□□ -1.11
COPS7A-221ENST00000546229 HIST1H2BAQ96A08 127 aa8.09□□□□□ -1.11
COPS7A-221ENST00000546229 LRP2P98164 4655 aa8.08□□□□□ -1.12
COPS7A-221ENST00000546229 TRBV7-3A0A075B6L6 115 aa8.08□□□□□ -1.12
COPS7A-221ENST00000546229 TRBV6-8A0A0A6YYG3 113 aa8.08□□□□□ -1.12
COPS7A-221ENST00000546229 SEC11BP0C7V7 166 aa8.08□□□□□ -1.12
COPS7A-221ENST00000546229 NEXN-AS1Q8NBZ9 246 aa8.08□□□□□ -1.12
COPS7A-221ENST00000546229 ZFP30Q9Y2G7 519 aa8.08□□□□□ -1.12
COPS7A-221ENST00000546229 URGCP-MRPS24S4R325 110 aa8.08□□□□□ -1.12
COPS7A-221ENST00000546229 A0A087WX48 190 aa8.07□□□□□ -1.12
COPS7A-221ENST00000546229 M0R381 172 aa8.07□□□□□ -1.12
COPS7A-221ENST00000546229 IFNA7P01567 189 aa8.07□□□□□ -1.12
COPS7A-221ENST00000546229 PRSS1P07477 247 aa8.07□□□□□ -1.12
COPS7A-221ENST00000546229 Q0VG73 95 aa8.07□□□□□ -1.12
COPS7A-221ENST00000546229 NTM-AS1Q6ZSK4 140 aa8.07□□□□□ -1.12
COPS7A-221ENST00000546229 ZFP82Q8N141 532 aa8.07□□□□□ -1.12
COPS7A-221ENST00000546229 FMC1Q96HJ9 113 aa8.07□□□□□ -1.12
COPS7A-221ENST00000546229 PRR34Q9NV39 138 aa8.07□□□□□ -1.12
COPS7A-221ENST00000546229 PHLDA3Q9Y5J5 127 aa8.07□□□□□ -1.12
COPS7A-221ENST00000546229 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.07□□□□□ -1.12
COPS7A-221ENST00000546229 TMSB15BA0A087X1C1 80 aa8.06□□□□□ -1.12
COPS7A-221ENST00000546229 USP17L23D6RBM5 183 aa8.06□□□□□ -1.12
COPS7A-221ENST00000546229 GIPP09681 153 aaPredicted RBP8.06□□□□□ -1.12
COPS7A-221ENST00000546229 RPL37AP61513 92 aaKnown RBP8.06□□□□□ -1.12
COPS7A-221ENST00000546229 RPL36AP83881 106 aaKnown RBP8.06□□□□□ -1.12
COPS7A-221ENST00000546229 CIRBPQ14011 172 aaKnown RBP8.06□□□□□ -1.12
COPS7A-221ENST00000546229 ELOBQ15370 118 aa8.06□□□□□ -1.12
COPS7A-221ENST00000546229 OR10AG1Q8NH19 301 aa8.06□□□□□ -1.12
COPS7A-221ENST00000546229 RPL36ALQ969Q0 106 aaKnown RBP8.06□□□□□ -1.12
COPS7A-221ENST00000546229 NKX6-2Q9C056 277 aaPredicted RBP8.06□□□□□ -1.12
COPS7A-221ENST00000546229 SNAI2O43623 268 aa8.05□□□□□ -1.12
COPS7A-221ENST00000546229 CXCL1P09341 107 aa8.05□□□□□ -1.12
COPS7A-221ENST00000546229 TPT1P13693 172 aaKnown RBP8.05□□□□□ -1.12
COPS7A-221ENST00000546229 FHITP49789 147 aa8.05□□□□□ -1.12
COPS7A-221ENST00000546229 RPL19P84098 196 aaKnown RBP8.05□□□□□ -1.12
COPS7A-221ENST00000546229 C14orf177Q52M58 125 aa8.05□□□□□ -1.12
COPS7A-221ENST00000546229 C9orf163Q8N9P6 203 aa8.05□□□□□ -1.12
COPS7A-221ENST00000546229 MLST8Q9BVC4 326 aa8.05□□□□□ -1.12
COPS7A-221ENST00000546229 SSBP4Q9BWG4 385 aaPredicted RBP8.05□□□□□ -1.12
COPS7A-221ENST00000546229 C1orf43Q9BWL3 253 aa8.05□□□□□ -1.12
COPS7A-221ENST00000546229 CYTL1Q9NRR1 136 aa8.05□□□□□ -1.12
COPS7A-221ENST00000546229 VAX2Q9UIW0 290 aa8.05□□□□□ -1.12
COPS7A-221ENST00000546229 PLA2G2DQ9UNK4 145 aa8.05□□□□□ -1.12
COPS7A-221ENST00000546229 KIF25-AS1Q9Y6Z4 181 aa8.05□□□□□ -1.12
COPS7A-221ENST00000546229 MAP1LC3B2A6NCE7 125 aa8.04□□□□□ -1.12
COPS7A-221ENST00000546229 RAB4BP61018 213 aa8.04□□□□□ -1.12
COPS7A-221ENST00000546229 C15orf54Q8N8G6 183 aa8.04□□□□□ -1.12
COPS7A-221ENST00000546229 TCEAL7Q9BRU2 100 aa8.04□□□□□ -1.12
COPS7A-221ENST00000546229 MAP1LC3BQ9GZQ8 125 aa8.04□□□□□ -1.12
COPS7A-221ENST00000546229 PTTG1O95997 202 aa8.03□□□□□ -1.12
COPS7A-221ENST00000546229 MIAQ16674 131 aa8.03□□□□□ -1.12
COPS7A-221ENST00000546229 SDIM1Q6ZPB5 146 aa8.03□□□□□ -1.12
COPS7A-221ENST00000546229 MED28Q9H204 178 aa8.03□□□□□ -1.12
COPS7A-221ENST00000546229 HLA-DQA1P01909 254 aa8.02□□□□□ -1.13
COPS7A-221ENST00000546229 RBX1P62877 108 aa8.02□□□□□ -1.13
COPS7A-221ENST00000546229 DGAT2L7PQ6IED9 249 aa8.02□□□□□ -1.13
COPS7A-221ENST00000546229 FXYD6-FXYD2A0A087WZ82 144 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms