RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 RHODO00212 210 aa8.12□□□□□ -1.11
YBX3-217ENST00000546164 IGLV2-8P01709 118 aa8.12□□□□□ -1.11
YBX3-217ENST00000546164 NKX2-5P52952 324 aaPredicted RBP8.12□□□□□ -1.11
YBX3-217ENST00000546164 ZFP82Q8N141 532 aa8.12□□□□□ -1.11
YBX3-217ENST00000546164 SSBP4Q9BWG4 385 aaPredicted RBP8.12□□□□□ -1.11
YBX3-217ENST00000546164 KIAA1109Q2LD37 5005 aa8.12□□□□□ -1.11
YBX3-217ENST00000546164 K7EP13 123 aa8.11□□□□□ -1.11
YBX3-217ENST00000546164 SNAI2O43623 268 aa8.11□□□□□ -1.11
YBX3-217ENST00000546164 GNG4P50150 75 aa8.11□□□□□ -1.11
YBX3-217ENST00000546164 RPL19P84098 196 aaKnown RBP8.11□□□□□ -1.11
YBX3-217ENST00000546164 PRR27Q6MZM9 219 aa8.11□□□□□ -1.11
YBX3-217ENST00000546164 Q6ZSN1 163 aa8.11□□□□□ -1.11
YBX3-217ENST00000546164 SFRP2Q96HF1 295 aa8.11□□□□□ -1.11
YBX3-217ENST00000546164 SAMD10Q9BYL1 202 aa8.11□□□□□ -1.11
YBX3-217ENST00000546164 JPT2Q9H910 190 aa8.11□□□□□ -1.11
YBX3-217ENST00000546164 MED9Q9NWA0 146 aa8.11□□□□□ -1.11
YBX3-217ENST00000546164 LRP1BQ9NZR2 4599 aa8.11□□□□□ -1.11
YBX3-217ENST00000546164 TRBV20OR9-2A0A075B6H5 130 aa8.1□□□□□ -1.11
YBX3-217ENST00000546164 RAB19A4D1S5 217 aa8.1□□□□□ -1.11
YBX3-217ENST00000546164 C19orf71A6NCJ1 209 aa8.1□□□□□ -1.11
YBX3-217ENST00000546164 OR5AL1P0C617 328 aa8.1□□□□□ -1.11
YBX3-217ENST00000546164 DNAH10OSP0CZ25 163 aa8.1□□□□□ -1.11
YBX3-217ENST00000546164 LINC00694P0DN24 101 aa8.1□□□□□ -1.11
YBX3-217ENST00000546164 TMEM250H0YL14 139 aa8.09□□□□□ -1.11
YBX3-217ENST00000546164 M0R381 172 aa8.09□□□□□ -1.11
YBX3-217ENST00000546164 CRYGDP07320 174 aa8.09□□□□□ -1.11
YBX3-217ENST00000546164 OR10AG1Q8NH19 301 aa8.09□□□□□ -1.11
YBX3-217ENST00000546164 BIN3Q9NQY0 253 aa8.09□□□□□ -1.11
YBX3-217ENST00000546164 DNAH5Q8TE73 4624 aa8.09□□□□□ -1.11
YBX3-217ENST00000546164 RBFOX3A6NFN3 312 aa8.08□□□□□ -1.12
YBX3-217ENST00000546164 NDUFS6O75380 124 aaKnown RBP8.08□□□□□ -1.12
YBX3-217ENST00000546164 RPS20P60866 119 aaKnown RBP8.08□□□□□ -1.12
YBX3-217ENST00000546164 TNP2Q05952 138 aa8.08□□□□□ -1.12
YBX3-217ENST00000546164 WFDC10BQ8IUB3 73 aa8.08□□□□□ -1.12
YBX3-217ENST00000546164 LY96Q9Y6Y9 160 aa8.08□□□□□ -1.12
YBX3-217ENST00000546164 TRAV9-2A0A087WT02 112 aa8.07□□□□□ -1.12
YBX3-217ENST00000546164 A0A087WWL8 130 aa8.07□□□□□ -1.12
YBX3-217ENST00000546164 IGLC6P0CF74 106 aa8.07□□□□□ -1.12
YBX3-217ENST00000546164 LINC00315P59091 139 aa8.07□□□□□ -1.12
YBX3-217ENST00000546164 LELP1Q5T871 98 aa8.07□□□□□ -1.12
YBX3-217ENST00000546164 LCE3BQ5TA77 95 aa8.07□□□□□ -1.12
YBX3-217ENST00000546164 FAM74A4Q5TZK3 123 aa8.07□□□□□ -1.12
YBX3-217ENST00000546164 C14orf178Q8N769 122 aaPredicted RBP8.07□□□□□ -1.12
YBX3-217ENST00000546164 ATP6V0E2Q8NHE4 81 aa8.07□□□□□ -1.12
YBX3-217ENST00000546164 DAZAP1Q96EP5 407 aaKnown RBP8.07□□□□□ -1.12
YBX3-217ENST00000546164 GTSF1LQ9H1H1 148 aa8.07□□□□□ -1.12
YBX3-217ENST00000546164 RYR1P21817 5038 aa8.06□□□□□ -1.12
YBX3-217ENST00000546164 TRBV10-1A0A0K0K1A3 114 aa8.06□□□□□ -1.12
YBX3-217ENST00000546164 EVI2AP22794 236 aa8.06□□□□□ -1.12
YBX3-217ENST00000546164 Q6ZRN7 208 aaPredicted RBP8.06□□□□□ -1.12
YBX3-217ENST00000546164 OR2D3Q8NGH3 330 aa8.06□□□□□ -1.12
YBX3-217ENST00000546164 Q9UF83 564 aa8.06□□□□□ -1.12
YBX3-217ENST00000546164 TRAV8-6A0A0B4J262 113 aa8.05□□□□□ -1.12
YBX3-217ENST00000546164 IGHV3-38A0A0C4DH36 116 aa8.05□□□□□ -1.12
YBX3-217ENST00000546164 XKRY2A2RUG3 117 aa8.05□□□□□ -1.12
YBX3-217ENST00000546164 GAGE12JA6NER3 117 aa8.05□□□□□ -1.12
YBX3-217ENST00000546164 P01737 135 aa8.05□□□□□ -1.12
YBX3-217ENST00000546164 GAGE1Q13065 139 aa8.05□□□□□ -1.12
YBX3-217ENST00000546164 GAGE4Q13068 117 aa8.05□□□□□ -1.12
YBX3-217ENST00000546164 GAGE5Q13069 117 aa8.05□□□□□ -1.12
YBX3-217ENST00000546164 GAGE13Q4V321 117 aa8.05□□□□□ -1.12
YBX3-217ENST00000546164 LINC01556Q5JQF7 62 aa8.05□□□□□ -1.12
YBX3-217ENST00000546164 SPANXN1Q5VSR9 72 aa8.05□□□□□ -1.12
YBX3-217ENST00000546164 C10orf126Q8N4M7 172 aa8.05□□□□□ -1.12
YBX3-217ENST00000546164 FER1L6-AS1Q8NA97 138 aa8.05□□□□□ -1.12
YBX3-217ENST00000546164 GZMBP10144 247 aa8.04□□□□□ -1.12
YBX3-217ENST00000546164 RAB4BP61018 213 aa8.04□□□□□ -1.12
YBX3-217ENST00000546164 TOR2AQ5JU69 321 aa8.04□□□□□ -1.12
YBX3-217ENST00000546164 NFE4Q86UQ8 179 aa8.04□□□□□ -1.12
YBX3-217ENST00000546164 NUDT10Q8NFP7 164 aa8.04□□□□□ -1.12
YBX3-217ENST00000546164 OR10G8Q8NGN5 311 aa8.04□□□□□ -1.12
YBX3-217ENST00000546164 OCC1Q8TAD7 63 aa8.04□□□□□ -1.12
YBX3-217ENST00000546164 NUDT11Q96G61 164 aa8.04□□□□□ -1.12
YBX3-217ENST00000546164 FAM210AQ96ND0 272 aa8.04□□□□□ -1.12
YBX3-217ENST00000546164 AP1S3Q96PC3 154 aa8.04□□□□□ -1.12
YBX3-217ENST00000546164 KIF25-AS1Q9Y6Z4 181 aa8.04□□□□□ -1.12
YBX3-217ENST00000546164 A0A087WWC5 75 aa8.03□□□□□ -1.12
YBX3-217ENST00000546164 F2Z2F3 143 aa8.03□□□□□ -1.12
YBX3-217ENST00000546164 K7EN84 100 aa8.03□□□□□ -1.12
YBX3-217ENST00000546164 CACNG7P62955 275 aa8.03□□□□□ -1.12
YBX3-217ENST00000546164 OR10J3Q5JRS4 329 aa8.03□□□□□ -1.12
YBX3-217ENST00000546164 APOBP04114 4563 aaKnown RBP8.03□□□□□ -1.12
YBX3-217ENST00000546164 TRBV7-3A0A075B6L6 115 aa8.02□□□□□ -1.13
YBX3-217ENST00000546164 MUC21A0A0G2JKD1 596 aa8.02□□□□□ -1.13
YBX3-217ENST00000546164 MUC21A0A140T8X8 626 aa8.02□□□□□ -1.13
YBX3-217ENST00000546164 CTRLP40313 264 aa8.02□□□□□ -1.13
YBX3-217ENST00000546164 UBE2D3P61077 147 aa8.02□□□□□ -1.13
YBX3-217ENST00000546164 UBE2D2P62837 147 aa8.02□□□□□ -1.13
YBX3-217ENST00000546164 RPL36AP83881 106 aaKnown RBP8.02□□□□□ -1.13
YBX3-217ENST00000546164 WDR73Q6P4I2 378 aa8.02□□□□□ -1.13
YBX3-217ENST00000546164 RPL36ALQ969Q0 106 aaKnown RBP8.02□□□□□ -1.13
YBX3-217ENST00000546164 CNFNQ9BYD5 112 aa8.02□□□□□ -1.13
YBX3-217ENST00000546164 EIF5A2Q9GZV4 153 aaKnown RBP8.02□□□□□ -1.13
YBX3-217ENST00000546164 RPP21Q9H633 154 aaKnown RBP8.02□□□□□ -1.13
YBX3-217ENST00000546164 MSRB1Q9NZV6 116 aa8.02□□□□□ -1.13
YBX3-217ENST00000546164 IBA57-AS1B1ANH7 110 aa8.01□□□□□ -1.13
YBX3-217ENST00000546164 ZNF56Q15929 161 aa8.01□□□□□ -1.13
YBX3-217ENST00000546164 TEX261Q6UWH6 196 aa8.01□□□□□ -1.13
YBX3-217ENST00000546164 FAM231DQ6ZW35 169 aa8.01□□□□□ -1.13
YBX3-217ENST00000546164 TPPP3Q9BW30 176 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms