RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 PFDN1O60925 122 aa13.32□□□□□ -0.28
CHD4-213ENST00000545584 LINC00694P0DN24 101 aa13.32□□□□□ -0.28
CHD4-213ENST00000545584 KRTAP10-1P60331 282 aa13.32□□□□□ -0.28
CHD4-213ENST00000545584 EIF5AP63241 154 aaKnown RBP13.32□□□□□ -0.28
CHD4-213ENST00000545584 ZFP82Q8N141 532 aa13.32□□□□□ -0.28
CHD4-213ENST00000545584 C14orf178Q8N769 122 aaPredicted RBP13.32□□□□□ -0.28
CHD4-213ENST00000545584 MBD3L1Q8WWY6 194 aa13.32□□□□□ -0.28
CHD4-213ENST00000545584 TM2D2Q9BX73 214 aa13.32□□□□□ -0.28
CHD4-213ENST00000545584 APOBP04114 4563 aaKnown RBP13.31□□□□□ -0.28
CHD4-213ENST00000545584 IGLV5-52A0A0A0MRZ9 124 aa13.31□□□□□ -0.28
CHD4-213ENST00000545584 LRCOL1A6NCL2 159 aa13.31□□□□□ -0.28
CHD4-213ENST00000545584 EPM2AB3EWF7 344 aa13.31□□□□□ -0.28
CHD4-213ENST00000545584 M0R381 172 aa13.31□□□□□ -0.28
CHD4-213ENST00000545584 NTN5Q8WTR8 489 aaPredicted RBP13.31□□□□□ -0.28
CHD4-213ENST00000545584 SFRP2Q96HF1 295 aa13.31□□□□□ -0.28
CHD4-213ENST00000545584 A0A1B0GV50 99 aa13.3□□□□□ -0.28
CHD4-213ENST00000545584 BCL2L11O43521 198 aa13.3□□□□□ -0.28
CHD4-213ENST00000545584 TOR2AQ5JU69 321 aa13.3□□□□□ -0.28
CHD4-213ENST00000545584 ABCA13Q86UQ4 5058 aa13.3□□□□□ -0.28
CHD4-213ENST00000545584 A0A087WWL8 130 aa13.29□□□□□ -0.28
CHD4-213ENST00000545584 TRAV8-3A0A0A6YYJ7 113 aa13.29□□□□□ -0.28
CHD4-213ENST00000545584 XGP55808 180 aa13.29□□□□□ -0.28
CHD4-213ENST00000545584 URGCP-MRPS24S4R325 110 aa13.29□□□□□ -0.28
CHD4-213ENST00000545584 H2AFB1P0C5Y9 115 aa13.28□□□□□ -0.28
CHD4-213ENST00000545584 Q8N814 137 aa13.28□□□□□ -0.28
CHD4-213ENST00000545584 Q9UF83 564 aa13.28□□□□□ -0.28
CHD4-213ENST00000545584 SCO2A0A1W2PP80 73 aa13.27□□□□□ -0.29
CHD4-213ENST00000545584 BAGE2Q86Y30 109 aa13.27□□□□□ -0.29
CHD4-213ENST00000545584 TRBV10-1A0A0K0K1A3 114 aa13.26□□□□□ -0.29
CHD4-213ENST00000545584 RPL36AP83881 106 aaKnown RBP13.26□□□□□ -0.29
CHD4-213ENST00000545584 Q8N3U1 123 aa13.26□□□□□ -0.29
CHD4-213ENST00000545584 FRZBQ92765 325 aa13.26□□□□□ -0.29
CHD4-213ENST00000545584 RPL36ALQ969Q0 106 aaKnown RBP13.26□□□□□ -0.29
CHD4-213ENST00000545584 CXCL1P09341 107 aa13.25□□□□□ -0.29
CHD4-213ENST00000545584 DAZ4Q86SG3 579 aaKnown RBP13.25□□□□□ -0.29
CHD4-213ENST00000545584 DAZ3Q9NR90 486 aaKnown RBP13.25□□□□□ -0.29
CHD4-213ENST00000545584 KCNIP4Q6PIL6 250 aa13.24□□□□□ -0.29
CHD4-213ENST00000545584 TMUB2Q71RG4 321 aa13.24□□□□□ -0.29
CHD4-213ENST00000545584 RMI2Q96E14 147 aa13.24□□□□□ -0.29
CHD4-213ENST00000545584 COX11Q9Y6N1 276 aa13.24□□□□□ -0.29
CHD4-213ENST00000545584 RPL19P84098 196 aaKnown RBP13.23□□□□□ -0.29
CHD4-213ENST00000545584 TMEM70Q9BUB7 260 aa13.23□□□□□ -0.29
CHD4-213ENST00000545584 MLST8Q9BVC4 326 aa13.23□□□□□ -0.29
CHD4-213ENST00000545584 TRBV7-3A0A075B6L6 115 aa13.22□□□□□ -0.29
CHD4-213ENST00000545584 PRR27Q6MZM9 219 aa13.22□□□□□ -0.29
CHD4-213ENST00000545584 NIT1Q86X76 327 aa13.22□□□□□ -0.29
CHD4-213ENST00000545584 MANBALQ9NQG1 85 aa13.22□□□□□ -0.29
CHD4-213ENST00000545584 A0A087WX48 190 aa13.21□□□□□ -0.29
CHD4-213ENST00000545584 RAB4BP61018 213 aa13.21□□□□□ -0.29
CHD4-213ENST00000545584 ELOBQ15370 118 aa13.21□□□□□ -0.29
CHD4-213ENST00000545584 ZNF56Q15929 161 aa13.21□□□□□ -0.29
CHD4-213ENST00000545584 Q5VSD8 79 aa13.21□□□□□ -0.29
CHD4-213ENST00000545584 EIF5AL1Q6IS14 154 aaKnown RBP13.21□□□□□ -0.29
CHD4-213ENST00000545584 OR10AG1Q8NH19 301 aa13.21□□□□□ -0.29
CHD4-213ENST00000545584 TEX46H3BTG2 121 aa13.2□□□□□ -0.3
CHD4-213ENST00000545584 UBE2D3P61077 147 aa13.2□□□□□ -0.3
CHD4-213ENST00000545584 UBE2D2P62837 147 aa13.2□□□□□ -0.3
CHD4-213ENST00000545584 SPANXN1Q5VSR9 72 aa13.2□□□□□ -0.3
CHD4-213ENST00000545584 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.2□□□□□ -0.3
CHD4-213ENST00000545584 CHCHD7Q9BUK0 85 aa13.2□□□□□ -0.3
CHD4-213ENST00000545584 GNG13Q9P2W3 67 aa13.2□□□□□ -0.3
CHD4-213ENST00000545584 SNAI2O43623 268 aa13.19□□□□□ -0.3
CHD4-213ENST00000545584 OR5AL1P0C617 328 aa13.19□□□□□ -0.3
CHD4-213ENST00000545584 INAFM2P0DMQ5 153 aa13.19□□□□□ -0.3
CHD4-213ENST00000545584 RPL35P42766 123 aaKnown RBP13.19□□□□□ -0.3
CHD4-213ENST00000545584 RAB5CP51148 216 aa13.19□□□□□ -0.3
CHD4-213ENST00000545584 OR10G8Q8NGN5 311 aa13.19□□□□□ -0.3
CHD4-213ENST00000545584 SSBP4Q9BWG4 385 aaPredicted RBP13.19□□□□□ -0.3
CHD4-213ENST00000545584 KLK12Q9UKR0 248 aa13.19□□□□□ -0.3
CHD4-213ENST00000545584 SMR3BP02814 79 aaPredicted RBP13.18□□□□□ -0.3
CHD4-213ENST00000545584 IGKV2D-24A0A075B6R9 120 aa13.17□□□□□ -0.3
CHD4-213ENST00000545584 TRAV1-1A0A0B4J248 108 aa13.17□□□□□ -0.3
CHD4-213ENST00000545584 F5H697 171 aa13.17□□□□□ -0.3
CHD4-213ENST00000545584 FAM229AH3BQW9 127 aa13.17□□□□□ -0.3
CHD4-213ENST00000545584 LECT2O14960 151 aa13.17□□□□□ -0.3
CHD4-213ENST00000545584 SMIM17P0DL12 118 aa13.17□□□□□ -0.3
CHD4-213ENST00000545584 WFDC2Q14508 124 aa13.17□□□□□ -0.3
CHD4-213ENST00000545584 UBE2WQ96B02 151 aa13.17□□□□□ -0.3
CHD4-213ENST00000545584 MUC21A0A0G2JKD1 596 aa13.16□□□□□ -0.3
CHD4-213ENST00000545584 MUC21A0A140T8X8 626 aa13.16□□□□□ -0.3
CHD4-213ENST00000545584 TMEM262E9PQX1 116 aa13.16□□□□□ -0.3
CHD4-213ENST00000545584 C1QBP02746 253 aa13.16□□□□□ -0.3
CHD4-213ENST00000545584 SSTP61278 116 aa13.16□□□□□ -0.3
CHD4-213ENST00000545584 CCL20P78556 96 aa13.16□□□□□ -0.3
CHD4-213ENST00000545584 HAMPP81172 84 aa13.16□□□□□ -0.3
CHD4-213ENST00000545584 NEXN-AS1Q8NBZ9 246 aa13.16□□□□□ -0.3
CHD4-213ENST00000545584 BAALCQ8WXS3 180 aa13.16□□□□□ -0.3
CHD4-213ENST00000545584 C11orf52Q96A22 123 aa13.16□□□□□ -0.3
CHD4-213ENST00000545584 DAZAP1Q96EP5 407 aaKnown RBP13.16□□□□□ -0.3
CHD4-213ENST00000545584 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.14□□□□□ -0.31
CHD4-213ENST00000545584 TRBV6-8A0A0A6YYG3 113 aa13.14□□□□□ -0.31
CHD4-213ENST00000545584 RBFOX3A6NFN3 312 aa13.14□□□□□ -0.31
CHD4-213ENST00000545584 Q0VG73 95 aa13.14□□□□□ -0.31
CHD4-213ENST00000545584 CENPWQ5EE01 88 aa13.14□□□□□ -0.31
CHD4-213ENST00000545584 TCTE3Q8IZS6 198 aa13.14□□□□□ -0.31
CHD4-213ENST00000545584 Q8N976 141 aa13.14□□□□□ -0.31
CHD4-213ENST00000545584 AP1S3Q96PC3 154 aa13.14□□□□□ -0.31
CHD4-213ENST00000545584 DERL1Q9BUN8 251 aa13.14□□□□□ -0.31
CHD4-213ENST00000545584 IFNA1P01562 189 aa13.13□□□□□ -0.31
CHD4-213ENST00000545584 RPS20P60866 119 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms