RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 KIAA1109Q2LD37 5005 aa15.78■□□□□ 0.12
CHFR-222ENST00000544093 EREGO14944 169 aa15.77■□□□□ 0.12
CHFR-222ENST00000544093 LINC00694P0DN24 101 aa15.77■□□□□ 0.12
CHFR-222ENST00000544093 BCL2P10415 239 aa15.77■□□□□ 0.12
CHFR-222ENST00000544093 DYNC1H1Q14204 4646 aaKnown RBP15.76■□□□□ 0.11
CHFR-222ENST00000544093 A0A087WWC5 75 aa15.76■□□□□ 0.11
CHFR-222ENST00000544093 OR5AL1P0C617 328 aa15.76■□□□□ 0.11
CHFR-222ENST00000544093 ERVFC1-1P60608 527 aa15.76■□□□□ 0.11
CHFR-222ENST00000544093 CENPWQ5EE01 88 aa15.76■□□□□ 0.11
CHFR-222ENST00000544093 SPATA12Q7Z6I5 190 aa15.76■□□□□ 0.11
CHFR-222ENST00000544093 DERL1Q9BUN8 251 aa15.76■□□□□ 0.11
CHFR-222ENST00000544093 VAX2Q9UIW0 290 aa15.76■□□□□ 0.11
CHFR-222ENST00000544093 HERC2O95714 4834 aa15.75■□□□□ 0.11
CHFR-222ENST00000544093 GAGE12JA6NER3 117 aa15.75■□□□□ 0.11
CHFR-222ENST00000544093 SNAI2O43623 268 aa15.75■□□□□ 0.11
CHFR-222ENST00000544093 GNG4P50150 75 aa15.75■□□□□ 0.11
CHFR-222ENST00000544093 RPL19P84098 196 aaKnown RBP15.75■□□□□ 0.11
CHFR-222ENST00000544093 GAGE1Q13065 139 aa15.75■□□□□ 0.11
CHFR-222ENST00000544093 GAGE4Q13068 117 aa15.75■□□□□ 0.11
CHFR-222ENST00000544093 GAGE5Q13069 117 aa15.75■□□□□ 0.11
CHFR-222ENST00000544093 GAGE13Q4V321 117 aa15.75■□□□□ 0.11
CHFR-222ENST00000544093 DAZAP1Q96EP5 407 aaKnown RBP15.75■□□□□ 0.11
CHFR-222ENST00000544093 SSBP4Q9BWG4 385 aaPredicted RBP15.75■□□□□ 0.11
CHFR-222ENST00000544093 BIN3Q9NQY0 253 aa15.75■□□□□ 0.11
CHFR-222ENST00000544093 A0A087WWL8 130 aa15.74■□□□□ 0.11
CHFR-222ENST00000544093 TRBV10-1A0A0K0K1A3 114 aa15.74■□□□□ 0.11
CHFR-222ENST00000544093 C14orf178Q8N769 122 aaPredicted RBP15.74■□□□□ 0.11
CHFR-222ENST00000544093 MED9Q9NWA0 146 aa15.73■□□□□ 0.11
CHFR-222ENST00000544093 RPS20P60866 119 aaKnown RBP15.72■□□□□ 0.11
CHFR-222ENST00000544093 SPANXN1Q5VSR9 72 aa15.72■□□□□ 0.11
CHFR-222ENST00000544093 OR10AG1Q8NH19 301 aa15.72■□□□□ 0.11
CHFR-222ENST00000544093 TNFRSF18Q9Y5U5 241 aa15.72■□□□□ 0.11
CHFR-222ENST00000544093 RAB4BP61018 213 aa15.71■□□□□ 0.11
CHFR-222ENST00000544093 BLOC1S1P78537 153 aa15.71■□□□□ 0.11
CHFR-222ENST00000544093 XKRY2A2RUG3 117 aa15.7■□□□□ 0.1
CHFR-222ENST00000544093 IBA57-AS1B1ANH7 110 aa15.7■□□□□ 0.1
CHFR-222ENST00000544093 IGLV2-8P01709 118 aa15.7■□□□□ 0.1
CHFR-222ENST00000544093 RPL36AP83881 106 aaKnown RBP15.7■□□□□ 0.1
CHFR-222ENST00000544093 RPL36ALQ969Q0 106 aaKnown RBP15.7■□□□□ 0.1
CHFR-222ENST00000544093 LAGE3Q14657 143 aa15.69■□□□□ 0.1
CHFR-222ENST00000544093 PGPEP1Q9NXJ5 209 aa15.69■□□□□ 0.1
CHFR-222ENST00000544093 RAB19A4D1S5 217 aa15.68■□□□□ 0.1
CHFR-222ENST00000544093 CDK2AP2O75956 126 aa15.68■□□□□ 0.1
CHFR-222ENST00000544093 CDPF1Q6NVV7 123 aa15.68■□□□□ 0.1
CHFR-222ENST00000544093 ALKAL2Q6UX46 152 aa15.68■□□□□ 0.1
CHFR-222ENST00000544093 TRBV7-3A0A075B6L6 115 aa15.67■□□□□ 0.1
CHFR-222ENST00000544093 C19orf71A6NCJ1 209 aa15.67■□□□□ 0.1
CHFR-222ENST00000544093 P01737 135 aa15.67■□□□□ 0.1
CHFR-222ENST00000544093 SMIM17P0DL12 118 aa15.67■□□□□ 0.1
CHFR-222ENST00000544093 KRTAP10-2P60368 255 aa15.67■□□□□ 0.1
CHFR-222ENST00000544093 ZNF56Q15929 161 aa15.67■□□□□ 0.1
CHFR-222ENST00000544093 OR2D3Q8NGH3 330 aa15.67■□□□□ 0.1
CHFR-222ENST00000544093 AP1S3Q96PC3 154 aa15.67■□□□□ 0.1
CHFR-222ENST00000544093 Q9UF83 564 aa15.67■□□□□ 0.1
CHFR-222ENST00000544093 IGHV3-30P01768 117 aa15.66■□□□□ 0.1
CHFR-222ENST00000544093 IGHV3-33P01772 117 aa15.66■□□□□ 0.1
CHFR-222ENST00000544093 IGHV3-30-3P0DP02 117 aa15.66■□□□□ 0.1
CHFR-222ENST00000544093 IGHV3-30-5P0DP03 117 aa15.66■□□□□ 0.1
CHFR-222ENST00000544093 OR10G8Q8NGN5 311 aa15.66■□□□□ 0.1
CHFR-222ENST00000544093 TRBV20OR9-2A0A075B6H5 130 aa15.65■□□□□ 0.1
CHFR-222ENST00000544093 A0A087WTM6 91 aa15.65■□□□□ 0.1
CHFR-222ENST00000544093 PSCAO43653 123 aa15.65■□□□□ 0.1
CHFR-222ENST00000544093 TOR2AQ5JU69 321 aa15.65■□□□□ 0.1
CHFR-222ENST00000544093 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.65■□□□□ 0.1
CHFR-222ENST00000544093 FER1L6-AS1Q8NA97 138 aa15.65■□□□□ 0.1
CHFR-222ENST00000544093 F2Z2F3 143 aa15.64■□□□□ 0.09
CHFR-222ENST00000544093 IGLC6P0CF74 106 aa15.64■□□□□ 0.09
CHFR-222ENST00000544093 UBE2D3P61077 147 aa15.64■□□□□ 0.09
CHFR-222ENST00000544093 UBE2D2P62837 147 aa15.64■□□□□ 0.09
CHFR-222ENST00000544093 CACNG7P62955 275 aa15.64■□□□□ 0.09
CHFR-222ENST00000544093 LYPD6BQ8NI32 183 aa15.64■□□□□ 0.09
CHFR-222ENST00000544093 URGCP-MRPS24S4R325 110 aa15.64■□□□□ 0.09
CHFR-222ENST00000544093 TMEM250H0YL14 139 aa15.63■□□□□ 0.09
CHFR-222ENST00000544093 TPPP3Q9BW30 176 aa15.63■□□□□ 0.09
CHFR-222ENST00000544093 MUC21A0A0G2JKD1 596 aa15.62■□□□□ 0.09
CHFR-222ENST00000544093 MUC21A0A140T8X8 626 aa15.62■□□□□ 0.09
CHFR-222ENST00000544093 RBFOX3A6NFN3 312 aa15.62■□□□□ 0.09
CHFR-222ENST00000544093 F5H697 171 aa15.62■□□□□ 0.09
CHFR-222ENST00000544093 CHCHD7Q9BUK0 85 aa15.62■□□□□ 0.09
CHFR-222ENST00000544093 TM2D2Q9BX73 214 aa15.62■□□□□ 0.09
CHFR-222ENST00000544093 TRAV8-3A0A0A6YYJ7 113 aa15.61■□□□□ 0.09
CHFR-222ENST00000544093 Q9HAA7 133 aa15.61■□□□□ 0.09
CHFR-222ENST00000544093 GZMBP10144 247 aa15.6■□□□□ 0.09
CHFR-222ENST00000544093 KCNIP4Q6PIL6 250 aa15.6■□□□□ 0.09
CHFR-222ENST00000544093 KIF25-AS1Q9Y6Z4 181 aa15.6■□□□□ 0.09
CHFR-222ENST00000544093 SSTP61278 116 aa15.59■□□□□ 0.09
CHFR-222ENST00000544093 NEXN-AS1Q8NBZ9 246 aa15.59■□□□□ 0.09
CHFR-222ENST00000544093 LRP1BQ9NZR2 4599 aa15.58■□□□□ 0.09
CHFR-222ENST00000544093 H7C1H1 209 aa15.58■□□□□ 0.08
CHFR-222ENST00000544093 NDUFS6O75380 124 aaKnown RBP15.58■□□□□ 0.08
CHFR-222ENST00000544093 ELOBQ15370 118 aa15.58■□□□□ 0.08
CHFR-222ENST00000544093 TMEM97Q5BJF2 176 aa15.58■□□□□ 0.08
CHFR-222ENST00000544093 NIT1Q86X76 327 aa15.58■□□□□ 0.08
CHFR-222ENST00000544093 COX11Q9Y6N1 276 aa15.58■□□□□ 0.08
CHFR-222ENST00000544093 A0A087WX48 190 aa15.57■□□□□ 0.08
CHFR-222ENST00000544093 TRGC1P0CF51 173 aa15.57■□□□□ 0.08
CHFR-222ENST00000544093 WDR73Q6P4I2 378 aa15.57■□□□□ 0.08
CHFR-222ENST00000544093 DAZ4Q86SG3 579 aaKnown RBP15.57■□□□□ 0.08
CHFR-222ENST00000544093 NUDT10Q8NFP7 164 aa15.57■□□□□ 0.08
CHFR-222ENST00000544093 NUDT11Q96G61 164 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms