RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 ZNRF2Q8NHG8 242 aa9.61□□□□□ -0.87
SMG8-202ENST00000543872 C16orf92Q96LL3 132 aa9.61□□□□□ -0.87
SMG8-202ENST00000543872 SPTA1P02549 2419 aa9.6□□□□□ -0.87
SMG8-202ENST00000543872 C15orf32Q32M92 178 aa9.6□□□□□ -0.87
SMG8-202ENST00000543872 GNRH2O43555 120 aa9.6□□□□□ -0.87
SMG8-202ENST00000543872 TMEM263Q8WUH6 116 aaKnown RBP9.6□□□□□ -0.87
SMG8-202ENST00000543872 IGKV3-7A0A075B6H7 116 aa9.59□□□□□ -0.87
SMG8-202ENST00000543872 PAPPA-AS1Q5QFB9 102 aa9.59□□□□□ -0.87
SMG8-202ENST00000543872 NPC2P61916 151 aa9.59□□□□□ -0.87
SMG8-202ENST00000543872 HERVK_113P63121 156 aa9.59□□□□□ -0.87
SMG8-202ENST00000543872 IGHV4-4A0A075B6R2 117 aa9.59□□□□□ -0.87
SMG8-202ENST00000543872 RBAKDNA6NC62 111 aa9.59□□□□□ -0.87
SMG8-202ENST00000543872 WIPF1O43516 503 aa9.59□□□□□ -0.87
SMG8-202ENST00000543872 ZNF256Q9Y2P7 627 aaPredicted RBP9.59□□□□□ -0.87
SMG8-202ENST00000543872 LRBAP50851 2863 aa9.59□□□□□ -0.87
SMG8-202ENST00000543872 LY6LH3BQJ8 138 aa9.58□□□□□ -0.88
SMG8-202ENST00000543872 JPT2Q9H910 190 aa9.58□□□□□ -0.88
SMG8-202ENST00000543872 COL27A1Q8IZC6 1860 aaPredicted RBP9.58□□□□□ -0.88
SMG8-202ENST00000543872 J3KT08 172 aa9.58□□□□□ -0.88
SMG8-202ENST00000543872 RNASE4P34096 147 aaKnown RBP9.58□□□□□ -0.88
SMG8-202ENST00000543872 TRBV10-2A0A0K0K1G8 114 aa9.58□□□□□ -0.88
SMG8-202ENST00000543872 FAM236AA0A1B0GUQ0 79 aa9.58□□□□□ -0.88
SMG8-202ENST00000543872 FAM236BA0A1B0GV22 79 aa9.58□□□□□ -0.88
SMG8-202ENST00000543872 RNF223E7ERA6 249 aa9.58□□□□□ -0.88
SMG8-202ENST00000543872 LGALS9O00182 355 aa9.58□□□□□ -0.88
SMG8-202ENST00000543872 NDUFA7O95182 113 aa9.58□□□□□ -0.88
SMG8-202ENST00000543872 TMEM101Q96IK0 257 aa9.58□□□□□ -0.88
SMG8-202ENST00000543872 A0A087WWL8 130 aa9.57□□□□□ -0.88
SMG8-202ENST00000543872 TRIAP1O43715 76 aa9.57□□□□□ -0.88
SMG8-202ENST00000543872 LY6HO94772 140 aa9.57□□□□□ -0.88
SMG8-202ENST00000543872 IGIPA6NJ69 53 aa9.57□□□□□ -0.88
SMG8-202ENST00000543872 CEMP1Q6PRD7 247 aaPredicted RBP9.57□□□□□ -0.88
SMG8-202ENST00000543872 CLEC2BQ92478 149 aa9.57□□□□□ -0.88
SMG8-202ENST00000543872 ZNF580Q9UK33 172 aa9.57□□□□□ -0.88
SMG8-202ENST00000543872 Q6ZSV7 163 aa9.56□□□□□ -0.88
SMG8-202ENST00000543872 GPHB5Q86YW7 130 aa9.56□□□□□ -0.88
SMG8-202ENST00000543872 AMELXQ99217 191 aa9.56□□□□□ -0.88
SMG8-202ENST00000543872 E7EQL1 145 aa9.56□□□□□ -0.88
SMG8-202ENST00000543872 RPL11P62913 178 aaKnown RBP9.56□□□□□ -0.88
SMG8-202ENST00000543872 FAM74A4Q5TZK3 123 aa9.55□□□□□ -0.88
SMG8-202ENST00000543872 NPBQ8NG41 125 aa9.55□□□□□ -0.88
SMG8-202ENST00000543872 P0DMU3 169 aa9.55□□□□□ -0.88
SMG8-202ENST00000543872 FAM231AP0DMU4 169 aa9.55□□□□□ -0.88
SMG8-202ENST00000543872 FAM231CP0DMU5 169 aa9.55□□□□□ -0.88
SMG8-202ENST00000543872 C9orf47Q6ZRZ4 202 aa9.55□□□□□ -0.88
SMG8-202ENST00000543872 METTL26Q96S19 204 aa9.55□□□□□ -0.88
SMG8-202ENST00000543872 ZFAND3Q9H8U3 227 aa9.55□□□□□ -0.88
SMG8-202ENST00000543872 PTPRZ1P23471 2315 aaPredicted RBP9.55□□□□□ -0.88
SMG8-202ENST00000543872 TRGV11A0A075B6L2 103 aa9.55□□□□□ -0.88
SMG8-202ENST00000543872 F5H768 121 aa9.55□□□□□ -0.88
SMG8-202ENST00000543872 F6UB75 175 aa9.55□□□□□ -0.88
SMG8-202ENST00000543872 ZNF22P17026 224 aaPredicted RBP9.55□□□□□ -0.88
SMG8-202ENST00000543872 TRAV21A0A0B4J279 112 aa9.54□□□□□ -0.88
SMG8-202ENST00000543872 UBE2E1P51965 193 aa9.54□□□□□ -0.88
SMG8-202ENST00000543872 CUL9Q8IWT3 2517 aa9.54□□□□□ -0.88
SMG8-202ENST00000543872 CLPSL1A2RUU4 121 aa9.54□□□□□ -0.88
SMG8-202ENST00000543872 H7C423 109 aa9.54□□□□□ -0.88
SMG8-202ENST00000543872 LRRC75A-AS1Q8N1F1 130 aa9.54□□□□□ -0.88
SMG8-202ENST00000543872 C20orf173Q96LM9 149 aa9.54□□□□□ -0.88
SMG8-202ENST00000543872 COL6A6A6NMZ7 2263 aa9.54□□□□□ -0.88
SMG8-202ENST00000543872 SVEP1Q4LDE5 3571 aa9.54□□□□□ -0.88
SMG8-202ENST00000543872 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.54□□□□□ -0.88
SMG8-202ENST00000543872 SDHAF1A6NFY7 115 aa9.54□□□□□ -0.88
SMG8-202ENST00000543872 RPL13AP40429 203 aaKnown RBP9.54□□□□□ -0.88
SMG8-202ENST00000543872 IGFL2Q6UWQ7 119 aa9.54□□□□□ -0.88
SMG8-202ENST00000543872 A0A0B4J2C4 111 aa9.53□□□□□ -0.88
SMG8-202ENST00000543872 G3V318 75 aa9.53□□□□□ -0.88
SMG8-202ENST00000543872 CDX4O14627 284 aaPredicted RBP9.53□□□□□ -0.88
SMG8-202ENST00000543872 ZNF883P0CG24 379 aa9.53□□□□□ -0.88
SMG8-202ENST00000543872 OR13C6PQ8NH95 151 aa9.53□□□□□ -0.88
SMG8-202ENST00000543872 LINC00527Q9UJ94 153 aa9.53□□□□□ -0.88
SMG8-202ENST00000543872 TRAV8-3A0A0A6YYJ7 113 aa9.53□□□□□ -0.88
SMG8-202ENST00000543872 PRRC2AP48634 2157 aaKnown RBP9.53□□□□□ -0.88
SMG8-202ENST00000543872 MUC4Q99102 2169 aa9.53□□□□□ -0.88
SMG8-202ENST00000543872 SORL1Q92673 2214 aa9.53□□□□□ -0.88
SMG8-202ENST00000543872 IGHV7-81A0A0B4J1V7 117 aa9.52□□□□□ -0.88
SMG8-202ENST00000543872 A0A0G2JNJ9 132 aa9.52□□□□□ -0.88
SMG8-202ENST00000543872 A0A0J9YXV3 536 aa9.52□□□□□ -0.88
SMG8-202ENST00000543872 VCYO14598 125 aa9.52□□□□□ -0.88
SMG8-202ENST00000543872 ZNF876PQ49A33 203 aa9.52□□□□□ -0.88
SMG8-202ENST00000543872 C3orf22Q8N5N4 141 aa9.52□□□□□ -0.88
SMG8-202ENST00000543872 Q9UFV3 132 aa9.52□□□□□ -0.88
SMG8-202ENST00000543872 TTC28Q96AY4 2481 aa9.52□□□□□ -0.88
SMG8-202ENST00000543872 IGHV1-69DA0A0B4J2H0 117 aa9.52□□□□□ -0.89
SMG8-202ENST00000543872 TMEM141Q96I45 108 aa9.52□□□□□ -0.89
SMG8-202ENST00000543872 M0R2P5 195 aa9.52□□□□□ -0.89
SMG8-202ENST00000543872 PPP1R17O96001 155 aa9.52□□□□□ -0.89
SMG8-202ENST00000543872 COX6CP09669 75 aa9.52□□□□□ -0.89
SMG8-202ENST00000543872 ZFAND2AQ8N6M9 145 aa9.52□□□□□ -0.89
SMG8-202ENST00000543872 ASH1LQ9NR48 2969 aaKnown RBP9.52□□□□□ -0.89
SMG8-202ENST00000543872 LEPROTO15243 131 aa9.51□□□□□ -0.89
SMG8-202ENST00000543872 CD3EP07766 207 aa9.51□□□□□ -0.89
SMG8-202ENST00000543872 SUMO4Q6EEV6 95 aa9.51□□□□□ -0.89
SMG8-202ENST00000543872 DCHS2Q6V1P9 2916 aa9.51□□□□□ -0.89
SMG8-202ENST00000543872 ICOSQ9Y6W8 199 aa9.51□□□□□ -0.89
SMG8-202ENST00000543872 EEF1AKMT3Q96AZ1 226 aa9.51□□□□□ -0.89
SMG8-202ENST00000543872 ANKHD1Q8IWZ3 2542 aaKnown RBP9.51□□□□□ -0.89
SMG8-202ENST00000543872 A0A0J9YXY3 114 aa9.5□□□□□ -0.89
SMG8-202ENST00000543872 TRBV30A0A0K0K1B3 111 aa9.5□□□□□ -0.89
SMG8-202ENST00000543872 RNASE3P12724 160 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms