RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 SLC25A29Q8N8R3 303 aa6.85□□□□□ -1.31
VEGFB-204ENST00000543462 SYT8Q8NBV8 401 aa6.85□□□□□ -1.31
VEGFB-204ENST00000543462 DAZAP1Q96EP5 407 aaKnown RBP6.85□□□□□ -1.31
VEGFB-204ENST00000543462 V9GYV3 84 aa6.85□□□□□ -1.31
VEGFB-204ENST00000543462 FRAS1Q86XX4 4008 aa6.85□□□□□ -1.31
VEGFB-204ENST00000543462 DNAH10Q8IVF4 4471 aa6.84□□□□□ -1.31
VEGFB-204ENST00000543462 DNAH2Q9P225 4427 aa6.84□□□□□ -1.31
VEGFB-204ENST00000543462 LOC100131303A0A0U1RQF7 123 aa6.84□□□□□ -1.31
VEGFB-204ENST00000543462 A0A1W2PPQ1 181 aa6.84□□□□□ -1.31
VEGFB-204ENST00000543462 K7EQD1 137 aa6.84□□□□□ -1.31
VEGFB-204ENST00000543462 LY6G6CO95867 125 aa6.84□□□□□ -1.31
VEGFB-204ENST00000543462 ADCYAP1P18509 176 aa6.84□□□□□ -1.31
VEGFB-204ENST00000543462 FOXA3P55318 350 aaPredicted RBP6.84□□□□□ -1.31
VEGFB-204ENST00000543462 SOHLH1Q5JUK2 328 aa6.84□□□□□ -1.31
VEGFB-204ENST00000543462 C10orf91Q5T1B1 145 aa6.84□□□□□ -1.31
VEGFB-204ENST00000543462 WDR73Q6P4I2 378 aa6.84□□□□□ -1.31
VEGFB-204ENST00000543462 UPK3BQ9BT76 320 aa6.84□□□□□ -1.31
VEGFB-204ENST00000543462 Q9UF83 564 aa6.84□□□□□ -1.31
VEGFB-204ENST00000543462 LINC00588Q9Y4M8 146 aa6.84□□□□□ -1.31
VEGFB-204ENST00000543462 MUC21A0A0G2JKD1 596 aa6.83□□□□□ -1.32
VEGFB-204ENST00000543462 MUC21A0A140T8X8 626 aa6.83□□□□□ -1.32
VEGFB-204ENST00000543462 TMEM218A2RU14 115 aa6.83□□□□□ -1.32
VEGFB-204ENST00000543462 XKRY2A2RUG3 117 aa6.83□□□□□ -1.32
VEGFB-204ENST00000543462 F2Z2F3 143 aa6.83□□□□□ -1.32
VEGFB-204ENST00000543462 GATCO43716 136 aaKnown RBP6.83□□□□□ -1.32
VEGFB-204ENST00000543462 NUDT3O95989 172 aa6.83□□□□□ -1.32
VEGFB-204ENST00000543462 FAM3BP58499 235 aaPredicted RBP6.83□□□□□ -1.32
VEGFB-204ENST00000543462 CACNG7P62955 275 aa6.83□□□□□ -1.32
VEGFB-204ENST00000543462 RHOHQ15669 191 aa6.83□□□□□ -1.32
VEGFB-204ENST00000543462 ESRGQ1W209 222 aa6.83□□□□□ -1.32
VEGFB-204ENST00000543462 LYZL1Q6UWQ5 148 aa6.83□□□□□ -1.32
VEGFB-204ENST00000543462 ZNRF2Q8NHG8 242 aa6.83□□□□□ -1.32
VEGFB-204ENST00000543462 MSRB1Q9NZV6 116 aa6.83□□□□□ -1.32
VEGFB-204ENST00000543462 CARHSP1Q9Y2V2 147 aaKnown RBP6.83□□□□□ -1.32
VEGFB-204ENST00000543462 ICOSQ9Y6W8 199 aa6.83□□□□□ -1.32
VEGFB-204ENST00000543462 A0A087WWL8 130 aa6.82□□□□□ -1.32
VEGFB-204ENST00000543462 IGHV3-73A0A0B4J1V6 119 aa6.82□□□□□ -1.32
VEGFB-204ENST00000543462 FAM231BA6NCW3 169 aa6.82□□□□□ -1.32
VEGFB-204ENST00000543462 A8MWL6 223 aa6.82□□□□□ -1.32
VEGFB-204ENST00000543462 GYPEP15421 78 aa6.82□□□□□ -1.32
VEGFB-204ENST00000543462 TIRAPP58753 221 aa6.82□□□□□ -1.32
VEGFB-204ENST00000543462 ERVFC1-1P60608 527 aa6.82□□□□□ -1.32
VEGFB-204ENST00000543462 ADIRFQ15847 76 aa6.82□□□□□ -1.32
VEGFB-204ENST00000543462 MRPL23Q16540 153 aaKnown RBP6.82□□□□□ -1.32
VEGFB-204ENST00000543462 Q6ZR54 194 aa6.82□□□□□ -1.32
VEGFB-204ENST00000543462 C14orf178Q8N769 122 aaPredicted RBP6.82□□□□□ -1.32
VEGFB-204ENST00000543462 TSKUQ8WUA8 353 aa6.82□□□□□ -1.32
VEGFB-204ENST00000543462 AP1S3Q96PC3 154 aa6.82□□□□□ -1.32
VEGFB-204ENST00000543462 SEC11CQ9BY50 192 aa6.82□□□□□ -1.32
VEGFB-204ENST00000543462 GFRA4Q9GZZ7 299 aa6.82□□□□□ -1.32
VEGFB-204ENST00000543462 MRPS16Q9Y3D3 137 aaKnown RBP6.82□□□□□ -1.32
VEGFB-204ENST00000543462 SPANXN1Q5VSR9 72 aa6.81□□□□□ -1.32
VEGFB-204ENST00000543462 SVBPQ8N300 66 aa6.81□□□□□ -1.32
VEGFB-204ENST00000543462 OR10G8Q8NGN5 311 aa6.81□□□□□ -1.32
VEGFB-204ENST00000543462 DNAH17Q9UFH2 4485 aa6.81□□□□□ -1.32
VEGFB-204ENST00000543462 FAT2Q9NYQ8 4349 aa6.8□□□□□ -1.32
VEGFB-204ENST00000543462 TRBV10-1A0A0K0K1A3 114 aa6.8□□□□□ -1.32
VEGFB-204ENST00000543462 SMIM27A0A1W2PRY6 76 aa6.8□□□□□ -1.32
VEGFB-204ENST00000543462 SRIP30626 198 aa6.8□□□□□ -1.32
VEGFB-204ENST00000543462 RAB4BP61018 213 aa6.8□□□□□ -1.32
VEGFB-204ENST00000543462 FAM74A4Q5TZK3 123 aa6.8□□□□□ -1.32
VEGFB-204ENST00000543462 LYPD5Q6UWN5 251 aa6.8□□□□□ -1.32
VEGFB-204ENST00000543462 NEGR1Q7Z3B1 354 aa6.8□□□□□ -1.32
VEGFB-204ENST00000543462 C15orf54Q8N8G6 183 aa6.8□□□□□ -1.32
VEGFB-204ENST00000543462 TPPP3Q9BW30 176 aa6.8□□□□□ -1.32
VEGFB-204ENST00000543462 HIGD1CA8MV81 97 aa6.79□□□□□ -1.32
VEGFB-204ENST00000543462 SNAPINO95295 136 aa6.79□□□□□ -1.32
VEGFB-204ENST00000543462 NTF3P20783 257 aa6.79□□□□□ -1.32
VEGFB-204ENST00000543462 EVI2AP22794 236 aa6.79□□□□□ -1.32
VEGFB-204ENST00000543462 CCL18P55774 89 aa6.79□□□□□ -1.32
VEGFB-204ENST00000543462 PNRC1Q12796 327 aaPredicted RBP6.79□□□□□ -1.32
VEGFB-204ENST00000543462 SH2D6Q7Z4S9 175 aa6.79□□□□□ -1.32
VEGFB-204ENST00000543462 PRADC1Q9BSG0 188 aa6.79□□□□□ -1.32
VEGFB-204ENST00000543462 KRTAP1-5Q9BYS1 174 aa6.79□□□□□ -1.32
VEGFB-204ENST00000543462 M0QY20 66 aa6.78□□□□□ -1.32
VEGFB-204ENST00000543462 TRGC1P0CF51 173 aa6.78□□□□□ -1.32
VEGFB-204ENST00000543462 UBE2D3P61077 147 aa6.78□□□□□ -1.32
VEGFB-204ENST00000543462 UBE2D2P62837 147 aa6.78□□□□□ -1.32
VEGFB-204ENST00000543462 NEXN-AS1Q8NBZ9 246 aa6.78□□□□□ -1.32
VEGFB-204ENST00000543462 NUP35Q8NFH5 326 aa6.78□□□□□ -1.32
VEGFB-204ENST00000543462 PGLYRP4Q96LB8 373 aa6.78□□□□□ -1.32
VEGFB-204ENST00000543462 APOC3P02656 99 aa6.77□□□□□ -1.33
VEGFB-204ENST00000543462 ZNF56Q15929 161 aa6.77□□□□□ -1.33
VEGFB-204ENST00000543462 SUMO4Q6EEV6 95 aa6.77□□□□□ -1.33
VEGFB-204ENST00000543462 UBE2DNLQ8IWF7 75 aa6.77□□□□□ -1.33
VEGFB-204ENST00000543462 DPH3P1Q9H4G8 78 aa6.77□□□□□ -1.33
VEGFB-204ENST00000543462 A0A1B0GUT8 65 aa6.76□□□□□ -1.33
VEGFB-204ENST00000543462 A0A1B0GXF2 115 aa6.76□□□□□ -1.33
VEGFB-204ENST00000543462 GAGE12JA6NER3 117 aa6.76□□□□□ -1.33
VEGFB-204ENST00000543462 F8W036 122 aa6.76□□□□□ -1.33
VEGFB-204ENST00000543462 GAGE1Q13065 139 aa6.76□□□□□ -1.33
VEGFB-204ENST00000543462 GAGE4Q13068 117 aa6.76□□□□□ -1.33
VEGFB-204ENST00000543462 GAGE5Q13069 117 aa6.76□□□□□ -1.33
VEGFB-204ENST00000543462 TWIST1Q15672 202 aa6.76□□□□□ -1.33
VEGFB-204ENST00000543462 GAGE13Q4V321 117 aa6.76□□□□□ -1.33
VEGFB-204ENST00000543462 WFDC10BQ8IUB3 73 aa6.76□□□□□ -1.33
VEGFB-204ENST00000543462 GATD1Q8NB37 220 aa6.76□□□□□ -1.33
VEGFB-204ENST00000543462 GTSF1LQ9H1H1 148 aa6.76□□□□□ -1.33
VEGFB-204ENST00000543462 NAT8BQ9UHF3 227 aa6.76□□□□□ -1.33
VEGFB-204ENST00000543462 TRBV7-3A0A075B6L6 115 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms