RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 LYPD1Q8N2G4 141 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 ZCCHC24Q8N2G6 241 aaKnown RBP2.84□□□□□ -1.95
MDM2-229ENST00000543046 SLC25A45Q8N413 288 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 C3orf56Q8N813 242 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 TMEM75Q8N9X5 138 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 TMEM263Q8WUH6 116 aaKnown RBP2.84□□□□□ -1.95
MDM2-229ENST00000543046 SRSF12Q8WXF0 261 aaKnown RBP2.84□□□□□ -1.95
MDM2-229ENST00000543046 METTL26Q96S19 204 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 CNFNQ9BYD5 112 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 DYNLRB1Q9NP97 96 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 MRPL35Q9NZE8 188 aaKnown RBP2.84□□□□□ -1.95
MDM2-229ENST00000543046 TMEM14CQ9P0S9 112 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 LINC00527Q9UJ94 153 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 KLK5Q9Y337 293 aaPredicted RBP2.84□□□□□ -1.95
MDM2-229ENST00000543046 SERP1Q9Y6X1 66 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 MUC22E2RYF6 1773 aaPredicted RBP2.84□□□□□ -1.96
MDM2-229ENST00000543046 PRRC2AP48634 2157 aaKnown RBP2.83□□□□□ -1.96
MDM2-229ENST00000543046 IGKV1OR2-108A0A075B7D4 117 aa2.83□□□□□ -1.96
MDM2-229ENST00000543046 TEX49A0A1B0GTD5 131 aa2.83□□□□□ -1.96
MDM2-229ENST00000543046 hADV29S1A0JD25 119 aa2.83□□□□□ -1.96
MDM2-229ENST00000543046 J3QT63 122 aa2.83□□□□□ -1.96
MDM2-229ENST00000543046 CCL16O15467 120 aa2.83□□□□□ -1.96
MDM2-229ENST00000543046 COX7A2P2O60397 106 aa2.83□□□□□ -1.96
MDM2-229ENST00000543046 OXTP01178 125 aa2.83□□□□□ -1.96
MDM2-229ENST00000543046 COX6CP09669 75 aa2.83□□□□□ -1.96
MDM2-229ENST00000543046 ZNF32P17041 273 aa2.83□□□□□ -1.96
MDM2-229ENST00000543046 RPS21P63220 83 aaKnown RBP2.83□□□□□ -1.96
MDM2-229ENST00000543046 PRCDQ00LT1 54 aa2.83□□□□□ -1.96
MDM2-229ENST00000543046 RPL18AQ02543 176 aaKnown RBP2.83□□□□□ -1.96
MDM2-229ENST00000543046 LAGE3Q14657 143 aa2.83□□□□□ -1.96
MDM2-229ENST00000543046 SPINK9Q5DT21 86 aa2.83□□□□□ -1.96
MDM2-229ENST00000543046 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
MDM2-229ENST00000543046 CEMP1Q6PRD7 247 aaPredicted RBP2.83□□□□□ -1.96
MDM2-229ENST00000543046 Q86TA4 180 aa2.83□□□□□ -1.96
MDM2-229ENST00000543046 MDP1Q86V88 176 aa2.83□□□□□ -1.96
MDM2-229ENST00000543046 KRTAP11-1Q8IUC1 163 aa2.83□□□□□ -1.96
MDM2-229ENST00000543046 C1orf158Q8N1D5 194 aa2.83□□□□□ -1.96
MDM2-229ENST00000543046 DAND5Q8N907 189 aa2.83□□□□□ -1.96
MDM2-229ENST00000543046 FGF23Q9GZV9 251 aaPredicted RBP2.83□□□□□ -1.96
MDM2-229ENST00000543046 ANAPC11Q9NYG5 84 aa2.83□□□□□ -1.96
MDM2-229ENST00000543046 TNRC6BQ9UPQ9 1833 aaKnown RBP2.83□□□□□ -1.96
MDM2-229ENST00000543046 TRGV5A0A0B4J1U4 118 aa2.82□□□□□ -1.96
MDM2-229ENST00000543046 A0A0J9YX75 114 aa2.82□□□□□ -1.96
MDM2-229ENST00000543046 ZNF815PA8K554 130 aa2.82□□□□□ -1.96
MDM2-229ENST00000543046 C12orf77C9JDV5 145 aa2.82□□□□□ -1.96
MDM2-229ENST00000543046 RNASE2P10153 161 aaKnown RBP2.82□□□□□ -1.96
MDM2-229ENST00000543046 HERVK_113P61574 105 aa2.82□□□□□ -1.96
MDM2-229ENST00000543046 ERHP84090 104 aaKnown RBP2.82□□□□□ -1.96
MDM2-229ENST00000543046 GUSBP11Q6P575 273 aa2.82□□□□□ -1.96
MDM2-229ENST00000543046 LYZL1Q6UWQ5 148 aa2.82□□□□□ -1.96
MDM2-229ENST00000543046 EXOC3-AS1Q8N2X6 119 aa2.82□□□□□ -1.96
MDM2-229ENST00000543046 LINC00311Q8N616 119 aa2.82□□□□□ -1.96
MDM2-229ENST00000543046 DCANP1Q8TF63 244 aa2.82□□□□□ -1.96
MDM2-229ENST00000543046 RNF185Q96GF1 192 aa2.82□□□□□ -1.96
MDM2-229ENST00000543046 Q9H3A6 140 aa2.82□□□□□ -1.96
MDM2-229ENST00000543046 DYSFO75923 2080 aa2.81□□□□□ -1.96
MDM2-229ENST00000543046 SPAG17Q6Q759 2223 aa2.81□□□□□ -1.96
MDM2-229ENST00000543046 IGHV1-45A0A0A0MS14 117 aa2.81□□□□□ -1.96
MDM2-229ENST00000543046 TRBV7-1A0A0A6YYK4 115 aa2.81□□□□□ -1.96
MDM2-229ENST00000543046 TRAV3A0A0B4J244 114 aa2.81□□□□□ -1.96
MDM2-229ENST00000543046 TMEM223A0PJW6 202 aa2.81□□□□□ -1.96
MDM2-229ENST00000543046 NDUFA3O95167 84 aa2.81□□□□□ -1.96
MDM2-229ENST00000543046 CRIP1P50238 77 aa2.81□□□□□ -1.96
MDM2-229ENST00000543046 NPC2P61916 151 aa2.81□□□□□ -1.96
MDM2-229ENST00000543046 PLGLAQ15195 96 aa2.81□□□□□ -1.96
MDM2-229ENST00000543046 ORMDL2Q53FV1 153 aa2.81□□□□□ -1.96
MDM2-229ENST00000543046 FAM201AQ5SY85 155 aa2.81□□□□□ -1.96
MDM2-229ENST00000543046 C9orf129Q5T035 196 aaKnown RBP2.81□□□□□ -1.96
MDM2-229ENST00000543046 SCGB1D4Q6XE38 83 aa2.81□□□□□ -1.96
MDM2-229ENST00000543046 LINC00305Q7Z4B0 112 aa2.81□□□□□ -1.96
MDM2-229ENST00000543046 TOMM6Q96B49 74 aa2.81□□□□□ -1.96
MDM2-229ENST00000543046 VSIG2Q96IQ7 327 aa2.81□□□□□ -1.96
MDM2-229ENST00000543046 C16orf95Q9H693 158 aa2.81□□□□□ -1.96
MDM2-229ENST00000543046 TET2Q6N021 2002 aaPredicted RBP2.81□□□□□ -1.96
MDM2-229ENST00000543046 TET1Q8NFU7 2136 aa2.8□□□□□ -1.96
MDM2-229ENST00000543046 IGKV1D-37A0A075B6S9 117 aa2.8□□□□□ -1.96
MDM2-229ENST00000543046 FAM236DA0A1B0GTK5 79 aa2.8□□□□□ -1.96
MDM2-229ENST00000543046 SDHAF1A6NFY7 115 aa2.8□□□□□ -1.96
MDM2-229ENST00000543046 LST1O00453 97 aa2.8□□□□□ -1.96
MDM2-229ENST00000543046 FAM236CP0DP71 79 aa2.8□□□□□ -1.96
MDM2-229ENST00000543046 ZNF22P17026 224 aaPredicted RBP2.8□□□□□ -1.96
MDM2-229ENST00000543046 LOXP28300 417 aaPredicted RBP2.8□□□□□ -1.96
MDM2-229ENST00000543046 SSR4P51571 173 aa2.8□□□□□ -1.96
MDM2-229ENST00000543046 CD164Q04900 197 aa2.8□□□□□ -1.96
MDM2-229ENST00000543046 ERCC8Q13216 396 aa2.8□□□□□ -1.96
MDM2-229ENST00000543046 FAM222AQ5U5X8 452 aa2.8□□□□□ -1.96
MDM2-229ENST00000543046 Q6JHZ5 121 aa2.8□□□□□ -1.96
MDM2-229ENST00000543046 CXCL17Q6UXB2 119 aa2.8□□□□□ -1.96
MDM2-229ENST00000543046 C16orf47Q6ZP98 133 aaPredicted RBP2.8□□□□□ -1.96
MDM2-229ENST00000543046 FAM19A1Q7Z5A9 133 aa2.8□□□□□ -1.96
MDM2-229ENST00000543046 PRNTQ86SH4 94 aa2.8□□□□□ -1.96
MDM2-229ENST00000543046 LINC01561Q8N1V8 128 aa2.8□□□□□ -1.96
MDM2-229ENST00000543046 FAM216BQ8N7L0 139 aa2.8□□□□□ -1.96
MDM2-229ENST00000543046 MDS2Q8NDY4 140 aa2.8□□□□□ -1.96
MDM2-229ENST00000543046 DSCR8Q96T75 97 aa2.8□□□□□ -1.96
MDM2-229ENST00000543046 NDUFA4L2Q9NRX3 87 aa2.8□□□□□ -1.96
MDM2-229ENST00000543046 DEC1Q9P2X7 70 aa2.8□□□□□ -1.96
MDM2-229ENST00000543046 RPUSD1Q9UJJ7 312 aaKnown RBP2.8□□□□□ -1.96
MDM2-229ENST00000543046 CCL26Q9Y258 94 aa2.8□□□□□ -1.96
MDM2-229ENST00000543046 USF3Q68DE3 2245 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms