RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 HIST1H2BCP62807 126 aa8.32□□□□□ -1.08
SRGAP1-205ENST00000542841 ZNF415Q09FC8 603 aa8.32□□□□□ -1.08
SRGAP1-205ENST00000542841 HIST2H2BEQ16778 126 aa8.32□□□□□ -1.08
SRGAP1-205ENST00000542841 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.32□□□□□ -1.08
SRGAP1-205ENST00000542841 SYT8Q8NBV8 401 aa8.32□□□□□ -1.08
SRGAP1-205ENST00000542841 OR10AG1Q8NH19 301 aa8.32□□□□□ -1.08
SRGAP1-205ENST00000542841 HIST1H2BHQ93079 126 aa8.32□□□□□ -1.08
SRGAP1-205ENST00000542841 HIST1H2BNQ99877 126 aa8.32□□□□□ -1.08
SRGAP1-205ENST00000542841 HIST1H2BMQ99879 126 aa8.32□□□□□ -1.08
SRGAP1-205ENST00000542841 SPXQ9BT56 116 aa8.32□□□□□ -1.08
SRGAP1-205ENST00000542841 TMEM208Q9BTX3 173 aa8.32□□□□□ -1.08
SRGAP1-205ENST00000542841 CSTL1Q9H114 145 aa8.32□□□□□ -1.08
SRGAP1-205ENST00000542841 XCL2Q9UBD3 114 aa8.32□□□□□ -1.08
SRGAP1-205ENST00000542841 S100A6P06703 90 aa8.31□□□□□ -1.08
SRGAP1-205ENST00000542841 RPL35AP18077 110 aaKnown RBP8.31□□□□□ -1.08
SRGAP1-205ENST00000542841 SLAQ13239 276 aa8.31□□□□□ -1.08
SRGAP1-205ENST00000542841 FAM104BQ5XKR9 115 aa8.31□□□□□ -1.08
SRGAP1-205ENST00000542841 C1orf158Q8N1D5 194 aa8.31□□□□□ -1.08
SRGAP1-205ENST00000542841 CSNK1G2-AS1Q8NCQ2 148 aa8.31□□□□□ -1.08
SRGAP1-205ENST00000542841 RNF183Q96D59 192 aa8.31□□□□□ -1.08
SRGAP1-205ENST00000542841 PPBPP02775 128 aa8.3□□□□□ -1.08
SRGAP1-205ENST00000542841 GIG44P09565 113 aaPredicted RBP8.3□□□□□ -1.08
SRGAP1-205ENST00000542841 OR10J3Q5JRS4 329 aa8.3□□□□□ -1.08
SRGAP1-205ENST00000542841 ZNF705AQ6ZN79 300 aaPredicted RBP8.3□□□□□ -1.08
SRGAP1-205ENST00000542841 LINC00336Q6ZUF6 198 aa8.3□□□□□ -1.08
SRGAP1-205ENST00000542841 TMEM263Q8WUH6 116 aaKnown RBP8.3□□□□□ -1.08
SRGAP1-205ENST00000542841 AP1S3Q96PC3 154 aa8.3□□□□□ -1.08
SRGAP1-205ENST00000542841 MUC4Q99102 2169 aa8.29□□□□□ -1.08
SRGAP1-205ENST00000542841 SMIM9A6NGZ8 99 aa8.29□□□□□ -1.08
SRGAP1-205ENST00000542841 TCTAP57738 103 aa8.29□□□□□ -1.08
SRGAP1-205ENST00000542841 Q0VG73 95 aa8.29□□□□□ -1.08
SRGAP1-205ENST00000542841 COA6Q5JTJ3 125 aaKnown RBP8.29□□□□□ -1.08
SRGAP1-205ENST00000542841 C16orf74Q96GX8 76 aa8.29□□□□□ -1.08
SRGAP1-205ENST00000542841 DPH3P1Q9H4G8 78 aa8.29□□□□□ -1.08
SRGAP1-205ENST00000542841 LAMTOR2Q9Y2Q5 125 aa8.29□□□□□ -1.08
SRGAP1-205ENST00000542841 M0R2P5 195 aa8.28□□□□□ -1.08
SRGAP1-205ENST00000542841 C11orf72Q8NBR9 251 aa8.28□□□□□ -1.08
SRGAP1-205ENST00000542841 C11orf45Q8TAV5 145 aa8.28□□□□□ -1.08
SRGAP1-205ENST00000542841 MDFICQ9P1T7 246 aa8.28□□□□□ -1.08
SRGAP1-205ENST00000542841 TIMM8BQ9Y5J9 83 aaPredicted RBP8.28□□□□□ -1.08
SRGAP1-205ENST00000542841 MUC21A0A0G2JKD1 596 aa8.27□□□□□ -1.09
SRGAP1-205ENST00000542841 MUC21A0A140T8X8 626 aa8.27□□□□□ -1.09
SRGAP1-205ENST00000542841 M0R381 172 aa8.27□□□□□ -1.09
SRGAP1-205ENST00000542841 SMIM17P0DL12 118 aa8.27□□□□□ -1.09
SRGAP1-205ENST00000542841 RAB4AP20338 218 aa8.27□□□□□ -1.09
SRGAP1-205ENST00000542841 SRIP30626 198 aa8.27□□□□□ -1.09
SRGAP1-205ENST00000542841 NANOS2P60321 138 aaKnown RBP8.27□□□□□ -1.09
SRGAP1-205ENST00000542841 ORMDL3Q8N138 153 aa8.27□□□□□ -1.09
SRGAP1-205ENST00000542841 RNASE8Q8TDE3 154 aaKnown RBP8.27□□□□□ -1.09
SRGAP1-205ENST00000542841 MRAP2Q96G30 205 aa8.27□□□□□ -1.09
SRGAP1-205ENST00000542841 ALKBH7Q9BT30 221 aaPredicted RBP8.27□□□□□ -1.09
SRGAP1-205ENST00000542841 MSRB1Q9NZV6 116 aa8.27□□□□□ -1.09
SRGAP1-205ENST00000542841 PKHD1P08F94 4074 aa8.27□□□□□ -1.09
SRGAP1-205ENST00000542841 ABCA13Q86UQ4 5058 aa8.27□□□□□ -1.09
SRGAP1-205ENST00000542841 C5orf52A6NGY3 159 aa8.26□□□□□ -1.09
SRGAP1-205ENST00000542841 A8MWV9 139 aa8.26□□□□□ -1.09
SRGAP1-205ENST00000542841 PPP1R17O96001 155 aa8.26□□□□□ -1.09
SRGAP1-205ENST00000542841 EVI2AP22794 236 aa8.26□□□□□ -1.09
SRGAP1-205ENST00000542841 RRN3P1Q2M238 152 aa8.26□□□□□ -1.09
SRGAP1-205ENST00000542841 LGALS9BQ3B8N2 356 aa8.26□□□□□ -1.09
SRGAP1-205ENST00000542841 KIAA1644Q3SXP7 199 aa8.26□□□□□ -1.09
SRGAP1-205ENST00000542841 MRPL51Q4U2R6 128 aaKnown RBP8.26□□□□□ -1.09
SRGAP1-205ENST00000542841 AMN1Q8IY45 258 aa8.26□□□□□ -1.09
SRGAP1-205ENST00000542841 POM121L12Q8N7R1 296 aa8.26□□□□□ -1.09
SRGAP1-205ENST00000542841 RNF185Q96GF1 192 aa8.26□□□□□ -1.09
SRGAP1-205ENST00000542841 GSN-AS1Q9NRJ2 163 aa8.26□□□□□ -1.09
SRGAP1-205ENST00000542841 HTN1P15515 57 aa8.25□□□□□ -1.09
SRGAP1-205ENST00000542841 NDUFA6P56556 154 aa8.25□□□□□ -1.09
SRGAP1-205ENST00000542841 DAZ2Q13117 558 aaKnown RBP8.25□□□□□ -1.09
SRGAP1-205ENST00000542841 ZNF876PQ49A33 203 aa8.25□□□□□ -1.09
SRGAP1-205ENST00000542841 C18orf32Q8TCD1 76 aa8.25□□□□□ -1.09
SRGAP1-205ENST00000542841 RASL10AQ92737 203 aa8.25□□□□□ -1.09
SRGAP1-205ENST00000542841 KIF25-AS1Q9Y6Z4 181 aa8.25□□□□□ -1.09
SRGAP1-205ENST00000542841 DNAH6Q9C0G6 4158 aa8.25□□□□□ -1.09
SRGAP1-205ENST00000542841 IGHV3OR16-12A0A075B7B8 117 aa8.24□□□□□ -1.09
SRGAP1-205ENST00000542841 A0A1B0GVY2 172 aa8.24□□□□□ -1.09
SRGAP1-205ENST00000542841 RHODO00212 210 aa8.24□□□□□ -1.09
SRGAP1-205ENST00000542841 CIDEAO60543 219 aa8.24□□□□□ -1.09
SRGAP1-205ENST00000542841 ESDP10768 282 aa8.24□□□□□ -1.09
SRGAP1-205ENST00000542841 HOXA5P20719 270 aa8.24□□□□□ -1.09
SRGAP1-205ENST00000542841 CKS2P33552 79 aa8.24□□□□□ -1.09
SRGAP1-205ENST00000542841 SSTP61278 116 aa8.24□□□□□ -1.09
SRGAP1-205ENST00000542841 C11orf68Q9H3H3 251 aaKnown RBP8.24□□□□□ -1.09
SRGAP1-205ENST00000542841 FAT2Q9NYQ8 4349 aa8.24□□□□□ -1.09
SRGAP1-205ENST00000542841 DNAH2Q9P225 4427 aa8.23□□□□□ -1.09
SRGAP1-205ENST00000542841 IGLL5B9A064 214 aa8.23□□□□□ -1.09
SRGAP1-205ENST00000542841 D6R8Y8 96 aa8.23□□□□□ -1.09
SRGAP1-205ENST00000542841 SNRPEP62304 92 aaKnown RBP8.23□□□□□ -1.09
SRGAP1-205ENST00000542841 BAGE3Q86Y29 109 aa8.23□□□□□ -1.09
SRGAP1-205ENST00000542841 C14orf178Q8N769 122 aaPredicted RBP8.23□□□□□ -1.09
SRGAP1-205ENST00000542841 PRELID3AQ96N28 172 aa8.23□□□□□ -1.09
SRGAP1-205ENST00000542841 APLNQ9ULZ1 77 aa8.23□□□□□ -1.09
SRGAP1-205ENST00000542841 PRSS47A8MTI9 375 aa8.22□□□□□ -1.09
SRGAP1-205ENST00000542841 CRYGDP07320 174 aa8.22□□□□□ -1.09
SRGAP1-205ENST00000542841 AZU1P20160 251 aa8.22□□□□□ -1.09
SRGAP1-205ENST00000542841 ZFP2Q6ZN57 461 aa8.22□□□□□ -1.09
SRGAP1-205ENST00000542841 OR11H2Q8NH07 326 aa8.22□□□□□ -1.09
SRGAP1-205ENST00000542841 CHCHD1Q96BP2 118 aaKnown RBP8.22□□□□□ -1.09
SRGAP1-205ENST00000542841 PLAC8L1A1L4L8 177 aa8.21□□□□□ -1.1
SRGAP1-205ENST00000542841 PRSS29PA6NIE9 313 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms