RNA–Protein interactions for RNA: ENST00000542700.6

CHMP4A-209, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3

Gene CHMP4A, Length 847 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-209ENST00000542700 ZNF705AQ6ZN79 300 aaPredicted RBP5.23□□□□□ -1.57
CHMP4A-209ENST00000542700 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.23□□□□□ -1.57
CHMP4A-209ENST00000542700 C1QTNF4Q9BXJ3 329 aa5.23□□□□□ -1.57
CHMP4A-209ENST00000542700 IL36BQ9NZH7 164 aa5.23□□□□□ -1.57
CHMP4A-209ENST00000542700 HLA-DRB4X5D2U9 266 aa5.23□□□□□ -1.57
CHMP4A-209ENST00000542700 TRAV12-2A0A075B6T6 113 aa5.22□□□□□ -1.57
CHMP4A-209ENST00000542700 TRAV12-3A0A0B4J271 114 aa5.22□□□□□ -1.57
CHMP4A-209ENST00000542700 TRAV21A0A0B4J279 112 aa5.22□□□□□ -1.57
CHMP4A-209ENST00000542700 TRBV7-9A0A0J9YWB2 115 aa5.22□□□□□ -1.57
CHMP4A-209ENST00000542700 C7orf71A4D174 169 aa5.22□□□□□ -1.57
CHMP4A-209ENST00000542700 C19orf71A6NCJ1 209 aa5.22□□□□□ -1.57
CHMP4A-209ENST00000542700 M0R2Z0 102 aa5.22□□□□□ -1.57
CHMP4A-209ENST00000542700 SPINK4O60575 86 aa5.22□□□□□ -1.57
CHMP4A-209ENST00000542700 CRISP2P16562 243 aa5.22□□□□□ -1.57
CHMP4A-209ENST00000542700 CDKN1BP46527 198 aa5.22□□□□□ -1.57
CHMP4A-209ENST00000542700 RPS20P60866 119 aaKnown RBP5.22□□□□□ -1.57
CHMP4A-209ENST00000542700 RPL19P84098 196 aaKnown RBP5.22□□□□□ -1.57
CHMP4A-209ENST00000542700 Q6ZSA8 131 aa5.22□□□□□ -1.57
CHMP4A-209ENST00000542700 SCXQ7RTU7 201 aa5.22□□□□□ -1.57
CHMP4A-209ENST00000542700 CBLN2Q8IUK8 224 aa5.22□□□□□ -1.57
CHMP4A-209ENST00000542700 NTN5Q8WTR8 489 aaPredicted RBP5.22□□□□□ -1.57
CHMP4A-209ENST00000542700 RPP21Q9H633 154 aaKnown RBP5.22□□□□□ -1.57
CHMP4A-209ENST00000542700 TMEM242Q9NWH2 141 aa5.22□□□□□ -1.57
CHMP4A-209ENST00000542700 NAGKQ9UJ70 344 aa5.22□□□□□ -1.57
CHMP4A-209ENST00000542700 MRPS16Q9Y3D3 137 aaKnown RBP5.22□□□□□ -1.57
CHMP4A-209ENST00000542700 URGCP-MRPS24S4R325 110 aa5.22□□□□□ -1.57
CHMP4A-209ENST00000542700 V9GYV3 84 aa5.22□□□□□ -1.57
CHMP4A-209ENST00000542700 XKRY2A2RUG3 117 aa5.21□□□□□ -1.58
CHMP4A-209ENST00000542700 SMIM9A6NGZ8 99 aa5.21□□□□□ -1.58
CHMP4A-209ENST00000542700 PFN1P07737 140 aaKnown RBP5.21□□□□□ -1.58
CHMP4A-209ENST00000542700 GZMBP10144 247 aa5.21□□□□□ -1.58
CHMP4A-209ENST00000542700 TCL1AP56279 114 aa5.21□□□□□ -1.58
CHMP4A-209ENST00000542700 SSTP61278 116 aa5.21□□□□□ -1.58
CHMP4A-209ENST00000542700 NUTF2P61970 127 aaKnown RBP5.21□□□□□ -1.58
CHMP4A-209ENST00000542700 MUC21Q5SSG8 566 aa5.21□□□□□ -1.58
CHMP4A-209ENST00000542700 FAM159AQ6UWV7 190 aa5.21□□□□□ -1.58
CHMP4A-209ENST00000542700 Q6ZQT7 251 aa5.21□□□□□ -1.58
CHMP4A-209ENST00000542700 COX8CQ7Z4L0 72 aa5.21□□□□□ -1.58
CHMP4A-209ENST00000542700 NFE4Q86UQ8 179 aa5.21□□□□□ -1.58
CHMP4A-209ENST00000542700 ZFAND2AQ8N6M9 145 aa5.21□□□□□ -1.58
CHMP4A-209ENST00000542700 PGLYRP4Q96LB8 373 aa5.21□□□□□ -1.58
CHMP4A-209ENST00000542700 FAM19A4Q96LR4 140 aa5.21□□□□□ -1.58
CHMP4A-209ENST00000542700 ODF3Q96PU9 254 aa5.21□□□□□ -1.58
CHMP4A-209ENST00000542700 LINC01587Q99440 93 aa5.21□□□□□ -1.58
CHMP4A-209ENST00000542700 TIMM8BQ9Y5J9 83 aaPredicted RBP5.21□□□□□ -1.58
CHMP4A-209ENST00000542700 TGIF2-C20orf24A0A0A6YYL0 155 aa5.2□□□□□ -1.58
CHMP4A-209ENST00000542700 GNRH2O43555 120 aa5.2□□□□□ -1.58
CHMP4A-209ENST00000542700 DEFB130BP0DP73 79 aa5.2□□□□□ -1.58
CHMP4A-209ENST00000542700 DEFB130AP0DP74 79 aa5.2□□□□□ -1.58
CHMP4A-209ENST00000542700 HTN1P15515 57 aa5.2□□□□□ -1.58
CHMP4A-209ENST00000542700 S100A4P26447 101 aaKnown RBP5.2□□□□□ -1.58
CHMP4A-209ENST00000542700 ESRGQ1W209 222 aa5.2□□□□□ -1.58
CHMP4A-209ENST00000542700 ANXA2RQ3ZCQ2 193 aa5.2□□□□□ -1.58
CHMP4A-209ENST00000542700 PRR9Q5T870 116 aa5.2□□□□□ -1.58
CHMP4A-209ENST00000542700 Q6AWC8 147 aa5.2□□□□□ -1.58
CHMP4A-209ENST00000542700 AMTNQ6UX39 209 aa5.2□□□□□ -1.58
CHMP4A-209ENST00000542700 BORCS7Q96B45 105 aa5.2□□□□□ -1.58
CHMP4A-209ENST00000542700 IMMP2LQ96T52 175 aa5.2□□□□□ -1.58
CHMP4A-209ENST00000542700 TMEM208Q9BTX3 173 aa5.2□□□□□ -1.58
CHMP4A-209ENST00000542700 TPPP3Q9BW30 176 aa5.2□□□□□ -1.58
CHMP4A-209ENST00000542700 IGHV1OR15-1A0A075B7D0 117 aa5.19□□□□□ -1.58
CHMP4A-209ENST00000542700 IGKV3D-20A0A0C4DH25 116 aa5.19□□□□□ -1.58
CHMP4A-209ENST00000542700 SMIM27A0A1W2PRY6 76 aa5.19□□□□□ -1.58
CHMP4A-209ENST00000542700 A8MTW9 85 aa5.19□□□□□ -1.58
CHMP4A-209ENST00000542700 KLLNB2CW77 178 aa5.19□□□□□ -1.58
CHMP4A-209ENST00000542700 INSP01308 110 aa5.19□□□□□ -1.58
CHMP4A-209ENST00000542700 CXCL1P09341 107 aa5.19□□□□□ -1.58
CHMP4A-209ENST00000542700 RPL37AP61513 92 aaKnown RBP5.19□□□□□ -1.58
CHMP4A-209ENST00000542700 ELOBQ15370 118 aa5.19□□□□□ -1.58
CHMP4A-209ENST00000542700 GFI1BQ5VTD9 330 aa5.19□□□□□ -1.58
CHMP4A-209ENST00000542700 TSKUQ8WUA8 353 aa5.19□□□□□ -1.58
CHMP4A-209ENST00000542700 KCNS1Q96KK3 526 aa5.19□□□□□ -1.58
CHMP4A-209ENST00000542700 CLUHP3Q96NS8 147 aa5.19□□□□□ -1.58
CHMP4A-209ENST00000542700 C11orf21Q9P2W6 132 aa5.19□□□□□ -1.58
CHMP4A-209ENST00000542700 NAT8BQ9UHF3 227 aa5.19□□□□□ -1.58
CHMP4A-209ENST00000542700 MUC21A0A0G2JKD1 596 aa5.18□□□□□ -1.58
CHMP4A-209ENST00000542700 MUC21A0A140T8X8 626 aa5.18□□□□□ -1.58
CHMP4A-209ENST00000542700 CBY3A6NI87 242 aa5.18□□□□□ -1.58
CHMP4A-209ENST00000542700 COLCA2A8K830 154 aa5.18□□□□□ -1.58
CHMP4A-209ENST00000542700 CRXO43186 299 aaPredicted RBP5.18□□□□□ -1.58
CHMP4A-209ENST00000542700 ZNF324O75467 553 aaPredicted RBP5.18□□□□□ -1.58
CHMP4A-209ENST00000542700 ARMS2P0C7Q2 107 aa5.18□□□□□ -1.58
CHMP4A-209ENST00000542700 RPS10P46783 165 aaKnown RBP5.18□□□□□ -1.58
CHMP4A-209ENST00000542700 RAB4BP61018 213 aa5.18□□□□□ -1.58
CHMP4A-209ENST00000542700 RIGQ13278 110 aa5.18□□□□□ -1.58
CHMP4A-209ENST00000542700 LINC01559Q495D7 138 aa5.18□□□□□ -1.58
CHMP4A-209ENST00000542700 CT83Q5H943 113 aa5.18□□□□□ -1.58
CHMP4A-209ENST00000542700 MRPL54Q6P161 138 aaKnown RBP5.18□□□□□ -1.58
CHMP4A-209ENST00000542700 LYZL1Q6UWQ5 148 aa5.18□□□□□ -1.58
CHMP4A-209ENST00000542700 FER1L6-AS1Q8NA97 138 aa5.18□□□□□ -1.58
CHMP4A-209ENST00000542700 NUP35Q8NFH5 326 aa5.18□□□□□ -1.58
CHMP4A-209ENST00000542700 BTF3L4Q96K17 158 aa5.18□□□□□ -1.58
CHMP4A-209ENST00000542700 DNAH8Q96JB1 4490 aa5.18□□□□□ -1.58
CHMP4A-209ENST00000542700 LPAP08519 4548 aa5.17□□□□□ -1.58
CHMP4A-209ENST00000542700 FAM231BA6NCW3 169 aa5.17□□□□□ -1.58
CHMP4A-209ENST00000542700 HIGD1CA8MV81 97 aa5.17□□□□□ -1.58
CHMP4A-209ENST00000542700 SIVA1O15304 175 aa5.17□□□□□ -1.58
CHMP4A-209ENST00000542700 ATP5G1P05496 136 aa5.17□□□□□ -1.58
CHMP4A-209ENST00000542700 CAMPP49913 170 aa5.17□□□□□ -1.58
CHMP4A-209ENST00000542700 GTSF1Q8WW33 167 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms