RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 MED9Q9NWA0 146 aa10.51□□□□□ -0.73
ECHDC2-223ENST00000542552 Q9UF83 564 aa10.51□□□□□ -0.73
ECHDC2-223ENST00000542552 BOLA1Q9Y3E2 137 aa10.51□□□□□ -0.73
ECHDC2-223ENST00000542552 LRP1BQ9NZR2 4599 aa10.5□□□□□ -0.73
ECHDC2-223ENST00000542552 C19orf71A6NCJ1 209 aa10.5□□□□□ -0.73
ECHDC2-223ENST00000542552 K7EP13 123 aa10.5□□□□□ -0.73
ECHDC2-223ENST00000542552 SNAI2O43623 268 aa10.5□□□□□ -0.73
ECHDC2-223ENST00000542552 OR5AL1P0C617 328 aa10.5□□□□□ -0.73
ECHDC2-223ENST00000542552 GNG4P50150 75 aa10.5□□□□□ -0.73
ECHDC2-223ENST00000542552 LINC00315P59091 139 aa10.5□□□□□ -0.73
ECHDC2-223ENST00000542552 Q6ZRN7 208 aaPredicted RBP10.5□□□□□ -0.73
ECHDC2-223ENST00000542552 C14orf178Q8N769 122 aaPredicted RBP10.5□□□□□ -0.73
ECHDC2-223ENST00000542552 OR10AG1Q8NH19 301 aa10.49□□□□□ -0.73
ECHDC2-223ENST00000542552 LY96Q9Y6Y9 160 aa10.49□□□□□ -0.73
ECHDC2-223ENST00000542552 TRAV9-2A0A087WT02 112 aa10.48□□□□□ -0.73
ECHDC2-223ENST00000542552 A0A087WWL8 130 aa10.48□□□□□ -0.73
ECHDC2-223ENST00000542552 ATP6V0E2Q8NHE4 81 aa10.48□□□□□ -0.73
ECHDC2-223ENST00000542552 GTSF1LQ9H1H1 148 aa10.48□□□□□ -0.73
ECHDC2-223ENST00000542552 LELP1Q5T871 98 aa10.47□□□□□ -0.73
ECHDC2-223ENST00000542552 FAM74A4Q5TZK3 123 aa10.47□□□□□ -0.73
ECHDC2-223ENST00000542552 IGHV3-38A0A0C4DH36 116 aa10.46□□□□□ -0.73
ECHDC2-223ENST00000542552 GAGE12JA6NER3 117 aa10.46□□□□□ -0.73
ECHDC2-223ENST00000542552 RBFOX3A6NFN3 312 aa10.46□□□□□ -0.73
ECHDC2-223ENST00000542552 IGLC6P0CF74 106 aa10.46□□□□□ -0.73
ECHDC2-223ENST00000542552 EVI2AP22794 236 aa10.46□□□□□ -0.73
ECHDC2-223ENST00000542552 GAGE1Q13065 139 aa10.46□□□□□ -0.73
ECHDC2-223ENST00000542552 GAGE4Q13068 117 aa10.46□□□□□ -0.73
ECHDC2-223ENST00000542552 GAGE5Q13069 117 aa10.46□□□□□ -0.73
ECHDC2-223ENST00000542552 GAGE13Q4V321 117 aa10.46□□□□□ -0.73
ECHDC2-223ENST00000542552 LINC01556Q5JQF7 62 aa10.46□□□□□ -0.73
ECHDC2-223ENST00000542552 TNFRSF18Q9Y5U5 241 aa10.46□□□□□ -0.73
ECHDC2-223ENST00000542552 RYR1P21817 5038 aa10.46□□□□□ -0.74
ECHDC2-223ENST00000542552 TRAV8-6A0A0B4J262 113 aa10.45□□□□□ -0.74
ECHDC2-223ENST00000542552 TMEM250H0YL14 139 aa10.45□□□□□ -0.74
ECHDC2-223ENST00000542552 GZMBP10144 247 aa10.45□□□□□ -0.74
ECHDC2-223ENST00000542552 RPS20P60866 119 aaKnown RBP10.45□□□□□ -0.74
ECHDC2-223ENST00000542552 OR2D3Q8NGH3 330 aa10.45□□□□□ -0.74
ECHDC2-223ENST00000542552 DAZAP1Q96EP5 407 aaKnown RBP10.45□□□□□ -0.74
ECHDC2-223ENST00000542552 BIN3Q9NQY0 253 aa10.45□□□□□ -0.74
ECHDC2-223ENST00000542552 MUC21A0A0G2JKD1 596 aa10.44□□□□□ -0.74
ECHDC2-223ENST00000542552 TRBV10-1A0A0K0K1A3 114 aa10.44□□□□□ -0.74
ECHDC2-223ENST00000542552 MUC21A0A140T8X8 626 aa10.44□□□□□ -0.74
ECHDC2-223ENST00000542552 RAB4BP61018 213 aa10.44□□□□□ -0.74
ECHDC2-223ENST00000542552 OR10J3Q5JRS4 329 aa10.44□□□□□ -0.74
ECHDC2-223ENST00000542552 SPANXN1Q5VSR9 72 aa10.44□□□□□ -0.74
ECHDC2-223ENST00000542552 NFE4Q86UQ8 179 aa10.44□□□□□ -0.74
ECHDC2-223ENST00000542552 MSRB1Q9NZV6 116 aa10.44□□□□□ -0.74
ECHDC2-223ENST00000542552 KIF25-AS1Q9Y6Z4 181 aa10.44□□□□□ -0.74
ECHDC2-223ENST00000542552 K7EN84 100 aa10.43□□□□□ -0.74
ECHDC2-223ENST00000542552 NDUFS6O75380 124 aaKnown RBP10.43□□□□□ -0.74
ECHDC2-223ENST00000542552 P01737 135 aa10.43□□□□□ -0.74
ECHDC2-223ENST00000542552 C10orf126Q8N4M7 172 aa10.43□□□□□ -0.74
ECHDC2-223ENST00000542552 OCC1Q8TAD7 63 aa10.43□□□□□ -0.74
ECHDC2-223ENST00000542552 FER1L6-AS1Q8NA97 138 aa10.42□□□□□ -0.74
ECHDC2-223ENST00000542552 NUDT10Q8NFP7 164 aa10.42□□□□□ -0.74
ECHDC2-223ENST00000542552 OR10G8Q8NGN5 311 aa10.42□□□□□ -0.74
ECHDC2-223ENST00000542552 NUDT11Q96G61 164 aa10.42□□□□□ -0.74
ECHDC2-223ENST00000542552 APOBP04114 4563 aaKnown RBP10.42□□□□□ -0.74
ECHDC2-223ENST00000542552 A0A087WWC5 75 aa10.41□□□□□ -0.74
ECHDC2-223ENST00000542552 XKRY2A2RUG3 117 aa10.41□□□□□ -0.74
ECHDC2-223ENST00000542552 FAM210AQ96ND0 272 aa10.41□□□□□ -0.74
ECHDC2-223ENST00000542552 HSPG2P98160 4391 aa10.4□□□□□ -0.74
ECHDC2-223ENST00000542552 TRBV7-3A0A075B6L6 115 aa10.4□□□□□ -0.74
ECHDC2-223ENST00000542552 IBA57-AS1B1ANH7 110 aa10.4□□□□□ -0.74
ECHDC2-223ENST00000542552 F2Z2F3 143 aa10.4□□□□□ -0.74
ECHDC2-223ENST00000542552 UBE2D3P61077 147 aa10.4□□□□□ -0.74
ECHDC2-223ENST00000542552 SSTP61278 116 aa10.4□□□□□ -0.74
ECHDC2-223ENST00000542552 UBE2D2P62837 147 aa10.4□□□□□ -0.74
ECHDC2-223ENST00000542552 CACNG7P62955 275 aa10.4□□□□□ -0.74
ECHDC2-223ENST00000542552 TOR2AQ5JU69 321 aa10.4□□□□□ -0.74
ECHDC2-223ENST00000542552 AP1S3Q96PC3 154 aa10.4□□□□□ -0.74
ECHDC2-223ENST00000542552 TPPP3Q9BW30 176 aa10.4□□□□□ -0.74
ECHDC2-223ENST00000542552 RPL36AP83881 106 aaKnown RBP10.39□□□□□ -0.75
ECHDC2-223ENST00000542552 ZNF56Q15929 161 aa10.39□□□□□ -0.75
ECHDC2-223ENST00000542552 SPATA12Q7Z6I5 190 aa10.39□□□□□ -0.75
ECHDC2-223ENST00000542552 RPL36ALQ969Q0 106 aaKnown RBP10.39□□□□□ -0.75
ECHDC2-223ENST00000542552 RNASE7Q9H1E1 156 aaKnown RBP10.39□□□□□ -0.75
ECHDC2-223ENST00000542552 IGHV3-30P01768 117 aa10.38□□□□□ -0.75
ECHDC2-223ENST00000542552 IGHV3-33P01772 117 aa10.38□□□□□ -0.75
ECHDC2-223ENST00000542552 IGHV3-30-3P0DP02 117 aa10.38□□□□□ -0.75
ECHDC2-223ENST00000542552 IGHV3-30-5P0DP03 117 aa10.38□□□□□ -0.75
ECHDC2-223ENST00000542552 CTRLP40313 264 aa10.38□□□□□ -0.75
ECHDC2-223ENST00000542552 KRTAP10-2P60368 255 aa10.38□□□□□ -0.75
ECHDC2-223ENST00000542552 WDR73Q6P4I2 378 aa10.38□□□□□ -0.75
ECHDC2-223ENST00000542552 LYZL1Q6UWQ5 148 aa10.38□□□□□ -0.75
ECHDC2-223ENST00000542552 NEXN-AS1Q8NBZ9 246 aa10.38□□□□□ -0.75
ECHDC2-223ENST00000542552 CNFNQ9BYD5 112 aa10.38□□□□□ -0.75
ECHDC2-223ENST00000542552 EIF5A2Q9GZV4 153 aaKnown RBP10.38□□□□□ -0.75
ECHDC2-223ENST00000542552 RPP21Q9H633 154 aaKnown RBP10.38□□□□□ -0.75
ECHDC2-223ENST00000542552 C16orf90A8MZG2 172 aa10.37□□□□□ -0.75
ECHDC2-223ENST00000542552 SMIM17P0DL12 118 aa10.37□□□□□ -0.75
ECHDC2-223ENST00000542552 TEX261Q6UWH6 196 aa10.37□□□□□ -0.75
ECHDC2-223ENST00000542552 FAM231DQ6ZW35 169 aa10.37□□□□□ -0.75
ECHDC2-223ENST00000542552 Q8N3U1 123 aa10.37□□□□□ -0.75
ECHDC2-223ENST00000542552 KRTAP17-1Q9BYP8 105 aa10.37□□□□□ -0.75
ECHDC2-223ENST00000542552 F5H697 171 aa10.36□□□□□ -0.75
ECHDC2-223ENST00000542552 SRP19P09132 144 aaKnown RBP10.36□□□□□ -0.75
ECHDC2-223ENST00000542552 ERVFC1-1P60608 527 aa10.36□□□□□ -0.75
ECHDC2-223ENST00000542552 LAGE3Q14657 143 aa10.36□□□□□ -0.75
ECHDC2-223ENST00000542552 A0A087WTM6 91 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms