RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 NIT1Q86X76 327 aa13.07□□□□□ -0.32
DDX11-220ENST00000542244 TM2D2Q9BX73 214 aa13.07□□□□□ -0.32
DDX11-220ENST00000542244 MAP1LC3B2A6NCE7 125 aa13.06□□□□□ -0.32
DDX11-220ENST00000542244 M0R381 172 aa13.06□□□□□ -0.32
DDX11-220ENST00000542244 AKR1C8PQ5T2L2 129 aa13.06□□□□□ -0.32
DDX11-220ENST00000542244 HIST1H2BAQ96A08 127 aa13.06□□□□□ -0.32
DDX11-220ENST00000542244 SFRP2Q96HF1 295 aa13.06□□□□□ -0.32
DDX11-220ENST00000542244 MAP1LC3BQ9GZQ8 125 aa13.06□□□□□ -0.32
DDX11-220ENST00000542244 ZNF674Q2M3X9 581 aa13.05□□□□□ -0.32
DDX11-220ENST00000542244 OR11H4Q8NGC9 324 aa13.05□□□□□ -0.32
DDX11-220ENST00000542244 KLK12Q9UKR0 248 aa13.05□□□□□ -0.32
DDX11-220ENST00000542244 TRAV8-3A0A0A6YYJ7 113 aa13.04□□□□□ -0.32
DDX11-220ENST00000542244 ARPC5O15511 151 aa13.04□□□□□ -0.32
DDX11-220ENST00000542244 RPL19P84098 196 aaKnown RBP13.04□□□□□ -0.32
DDX11-220ENST00000542244 FAM162BQ5T6X4 162 aa13.04□□□□□ -0.32
DDX11-220ENST00000542244 BATF3Q9NR55 127 aa13.04□□□□□ -0.32
DDX11-220ENST00000542244 ZFP30Q9Y2G7 519 aa13.04□□□□□ -0.32
DDX11-220ENST00000542244 LTAP01374 205 aa13.03□□□□□ -0.32
DDX11-220ENST00000542244 C1QBP02746 253 aa13.03□□□□□ -0.32
DDX11-220ENST00000542244 LINC01559Q495D7 138 aa13.03□□□□□ -0.32
DDX11-220ENST00000542244 SYT8Q8NBV8 401 aa13.03□□□□□ -0.32
DDX11-220ENST00000542244 BOLA1Q9Y3E2 137 aa13.03□□□□□ -0.32
DDX11-220ENST00000542244 CST9LP1Q5W188 147 aa13.02□□□□□ -0.33
DDX11-220ENST00000542244 LINC00528Q8N1L1 170 aa13.02□□□□□ -0.33
DDX11-220ENST00000542244 FMC1Q96HJ9 113 aa13.02□□□□□ -0.33
DDX11-220ENST00000542244 PHLDA3Q9Y5J5 127 aa13.02□□□□□ -0.33
DDX11-220ENST00000542244 IGKV2D-24A0A075B6R9 120 aa13.01□□□□□ -0.33
DDX11-220ENST00000542244 A0A087WWC5 75 aa13.01□□□□□ -0.33
DDX11-220ENST00000542244 MUC21A0A0G2JKD1 596 aa13.01□□□□□ -0.33
DDX11-220ENST00000542244 MUC21A0A140T8X8 626 aa13.01□□□□□ -0.33
DDX11-220ENST00000542244 A0A1B0GV50 99 aa13.01□□□□□ -0.33
DDX11-220ENST00000542244 RHODO00212 210 aa13.01□□□□□ -0.33
DDX11-220ENST00000542244 PAGE4O60829 102 aa13.01□□□□□ -0.33
DDX11-220ENST00000542244 TPT1P13693 172 aaKnown RBP13.01□□□□□ -0.33
DDX11-220ENST00000542244 UBE2G1P62253 170 aa13.01□□□□□ -0.33
DDX11-220ENST00000542244 SCXQ7RTU7 201 aa13.01□□□□□ -0.33
DDX11-220ENST00000542244 UBE2WQ96B02 151 aa13.01□□□□□ -0.33
DDX11-220ENST00000542244 TRBV6-1A0A0K0K1D8 114 aa13□□□□□ -0.33
DDX11-220ENST00000542244 UBE2D3P61077 147 aa13□□□□□ -0.33
DDX11-220ENST00000542244 UBE2D2P62837 147 aa13□□□□□ -0.33
DDX11-220ENST00000542244 NKX6-2Q9C056 277 aaPredicted RBP13□□□□□ -0.33
DDX11-220ENST00000542244 OR10AG1Q8NH19 301 aa12.99□□□□□ -0.33
DDX11-220ENST00000542244 SCO2A0A1W2PP80 73 aa12.98□□□□□ -0.33
DDX11-220ENST00000542244 AKR1C3P42330 323 aa12.98□□□□□ -0.33
DDX11-220ENST00000542244 KRTAP10-4P60372 401 aaPredicted RBP12.98□□□□□ -0.33
DDX11-220ENST00000542244 TOR2AQ5JU69 321 aa12.98□□□□□ -0.33
DDX11-220ENST00000542244 RBFOX3A6NFN3 312 aa12.97□□□□□ -0.33
DDX11-220ENST00000542244 ENHOQ6UWT2 76 aa12.97□□□□□ -0.33
DDX11-220ENST00000542244 ZFP82Q8N141 532 aa12.97□□□□□ -0.33
DDX11-220ENST00000542244 SSTP61278 116 aa12.96□□□□□ -0.33
DDX11-220ENST00000542244 NEXN-AS1Q8NBZ9 246 aa12.96□□□□□ -0.33
DDX11-220ENST00000542244 URGCP-MRPS24S4R325 110 aa12.96□□□□□ -0.33
DDX11-220ENST00000542244 LRP1Q07954 4544 aaKnown RBP12.95□□□□□ -0.34
DDX11-220ENST00000542244 TRBV7-3A0A075B6L6 115 aa12.95□□□□□ -0.34
DDX11-220ENST00000542244 RPL36AP83881 106 aaKnown RBP12.95□□□□□ -0.34
DDX11-220ENST00000542244 ATRAIDQ6UW56 229 aa12.95□□□□□ -0.34
DDX11-220ENST00000542244 FAM213BQ8TBF2 198 aa12.95□□□□□ -0.34
DDX11-220ENST00000542244 RPL36ALQ969Q0 106 aaKnown RBP12.95□□□□□ -0.34
DDX11-220ENST00000542244 MLST8Q9BVC4 326 aa12.95□□□□□ -0.34
DDX11-220ENST00000542244 A0A087WX48 190 aa12.94□□□□□ -0.34
DDX11-220ENST00000542244 TRBV10-1A0A0K0K1A3 114 aa12.94□□□□□ -0.34
DDX11-220ENST00000542244 J3QL48 77 aa12.94□□□□□ -0.34
DDX11-220ENST00000542244 MPV17L2Q567V2 206 aa12.94□□□□□ -0.34
DDX11-220ENST00000542244 PRR27Q6MZM9 219 aa12.94□□□□□ -0.34
DDX11-220ENST00000542244 Q8N976 141 aa12.94□□□□□ -0.34
DDX11-220ENST00000542244 OR10G8Q8NGN5 311 aa12.94□□□□□ -0.34
DDX11-220ENST00000542244 STOML3Q8TAV4 291 aa12.94□□□□□ -0.34
DDX11-220ENST00000542244 SFT2D1Q8WV19 159 aa12.94□□□□□ -0.34
DDX11-220ENST00000542244 MBD3L1Q8WWY6 194 aa12.94□□□□□ -0.34
DDX11-220ENST00000542244 TRBV6-8A0A0A6YYG3 113 aa12.93□□□□□ -0.34
DDX11-220ENST00000542244 NTM-AS1Q6ZSK4 140 aa12.93□□□□□ -0.34
DDX11-220ENST00000542244 KCNRGQ8N5I3 272 aa12.93□□□□□ -0.34
DDX11-220ENST00000542244 CIRBP-AS1Q8TBR5 109 aa12.93□□□□□ -0.34
DDX11-220ENST00000542244 COX11Q9Y6N1 276 aa12.93□□□□□ -0.34
DDX11-220ENST00000542244 TMEM262E9PQX1 116 aa12.92□□□□□ -0.34
DDX11-220ENST00000542244 PLA2G1BP04054 148 aaKnown RBP12.92□□□□□ -0.34
DDX11-220ENST00000542244 ZNF56Q15929 161 aa12.92□□□□□ -0.34
DDX11-220ENST00000542244 C15orf54Q8N8G6 183 aa12.92□□□□□ -0.34
DDX11-220ENST00000542244 RMI2Q96E14 147 aa12.92□□□□□ -0.34
DDX11-220ENST00000542244 SNAI2O43623 268 aa12.91□□□□□ -0.34
DDX11-220ENST00000542244 RAB4BP61018 213 aa12.91□□□□□ -0.34
DDX11-220ENST00000542244 CCL20P78556 96 aa12.91□□□□□ -0.34
DDX11-220ENST00000542244 BAGE2Q86Y30 109 aa12.91□□□□□ -0.34
DDX11-220ENST00000542244 TCEAL7Q9BRU2 100 aa12.91□□□□□ -0.34
DDX11-220ENST00000542244 CHAC1Q9BUX1 264 aa12.91□□□□□ -0.34
DDX11-220ENST00000542244 SSBP4Q9BWG4 385 aaPredicted RBP12.91□□□□□ -0.34
DDX11-220ENST00000542244 KIF25-AS1Q9Y6Z4 181 aa12.91□□□□□ -0.34
DDX11-220ENST00000542244 KRTAP29-1A8MX34 341 aaPredicted RBP12.9□□□□□ -0.34
DDX11-220ENST00000542244 RGS21Q2M5E4 152 aa12.9□□□□□ -0.34
DDX11-220ENST00000542244 CHCHD7Q9BUK0 85 aa12.9□□□□□ -0.34
DDX11-220ENST00000542244 DERL1Q9BUN8 251 aa12.9□□□□□ -0.34
DDX11-220ENST00000542244 SEC11BP0C7V7 166 aa12.89□□□□□ -0.35
DDX11-220ENST00000542244 GZMBP10144 247 aa12.89□□□□□ -0.35
DDX11-220ENST00000542244 CLPSL2Q6UWE3 100 aa12.88□□□□□ -0.35
DDX11-220ENST00000542244 ZNF471Q9BX82 626 aaPredicted RBP12.88□□□□□ -0.35
DDX11-220ENST00000542244 FAT3Q8TDW7 4589 aa12.88□□□□□ -0.35
DDX11-220ENST00000542244 ANGP03950 147 aaKnown RBP12.87□□□□□ -0.35
DDX11-220ENST00000542244 ELOBQ15370 118 aa12.87□□□□□ -0.35
DDX11-220ENST00000542244 KRTAP26-1Q6PEX3 210 aa12.87□□□□□ -0.35
DDX11-220ENST00000542244 TMUB2Q71RG4 321 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms