RNA–Protein interactions for RNA: ENST00000541548.5

CUL3-214, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-214ENST00000541548 GINS2Q9Y248 185 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 LRRK2Q5S007 2527 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 C3P01024 1663 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 SHPRHQ149N8 1683 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 ZC3H13Q5T200 1668 aaKnown RBP0.48□□□□□ -2.33
CUL3-214ENST00000541548 IGF2RP11717 2491 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 SPEGQ15772 3267 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 LRRC37A3O60309 1634 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 SHROOM2Q13796 1616 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 GVINP1Q7Z2Y8 2422 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 CREBBPQ92793 2442 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 TEX15Q9BXT5 2789 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 PRUNE2Q8WUY3 3088 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 ZFYVE16Q7Z3T8 1539 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 MUC2Q02817 5179 aa0.48□□□□□ -2.33
CUL3-214ENST00000541548 POLA1P09884 1462 aaPredicted RBP0.48□□□□□ -2.33
CUL3-214ENST00000541548 OVOS2A0A0G2JMS6 1433 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 ABCC5O15440 1437 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 SOGA1O94964 1423 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 C10orf71Q711Q0 1435 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 VWFP04275 2813 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 USP34Q70CQ2 3546 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 ASPMQ8IZT6 3477 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 RREB1Q92766 1687 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 IGSF10Q6WRI0 2623 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 WDR97A6NE52 1622 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 STAB1Q9NY15 2570 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 MYH1P12882 1939 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 UQCRQO14949 82 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 DPM2O94777 84 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 EVI2AP22794 236 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 FXYD6P3P58550 94 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 B2MP61769 119 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 OR8B8Q15620 311 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 ATOH7Q8N100 152 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 HSPB11Q9Y547 144 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 SLIT1O75093 1534 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 ABCC1P33527 1531 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.47□□□□□ -2.33
CUL3-214ENST00000541548 SPTA1P02549 2419 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 EP300Q09472 2414 aaPredicted RBP0.47□□□□□ -2.33
CUL3-214ENST00000541548 ATP10BO94823 1461 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 LRRC9Q6ZRR7 1453 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 CACNA1EQ15878 2313 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 RELNP78509 3460 aa0.47□□□□□ -2.33
CUL3-214ENST00000541548 PIEZO2Q9H5I5 2752 aa0.46□□□□□ -2.34
CUL3-214ENST00000541548 RYR2Q92736 4967 aa0.46□□□□□ -2.34
CUL3-214ENST00000541548 CSMD1Q96PZ7 3565 aa0.46□□□□□ -2.34
CUL3-214ENST00000541548 MYO3AQ8NEV4 1616 aa0.46□□□□□ -2.34
CUL3-214ENST00000541548 USP32Q8NFA0 1604 aa0.46□□□□□ -2.34
CUL3-214ENST00000541548 EPPK1P58107 5090 aaKnown RBP0.46□□□□□ -2.34
CUL3-214ENST00000541548 DNMBPQ6XZF7 1577 aa0.46□□□□□ -2.34
CUL3-214ENST00000541548 VIRMAQ69YN4 1812 aaKnown RBP0.46□□□□□ -2.34
CUL3-214ENST00000541548 A0A0G2JMM0 328 aa0.46□□□□□ -2.34
CUL3-214ENST00000541548 SPINK7P58062 85 aa0.46□□□□□ -2.34
CUL3-214ENST00000541548 TMEM244Q5VVB8 128 aa0.46□□□□□ -2.34
CUL3-214ENST00000541548 FAM103A1Q9BTL3 118 aaKnown RBP0.46□□□□□ -2.34
CUL3-214ENST00000541548 BANF2Q9H503 90 aa0.46□□□□□ -2.34
CUL3-214ENST00000541548 LMTK2Q8IWU2 1503 aa0.46□□□□□ -2.34
CUL3-214ENST00000541548 RIF1Q5UIP0 2472 aaKnown RBP0.46□□□□□ -2.34
CUL3-214ENST00000541548 A2ML1A8K2U0 1454 aa0.46□□□□□ -2.34
CUL3-214ENST00000541548 CUL7Q14999 1698 aa0.46□□□□□ -2.34
CUL3-214ENST00000541548 ATRQ13535 2644 aa0.46□□□□□ -2.34
CUL3-214ENST00000541548 UACAQ9BZF9 1416 aa0.46□□□□□ -2.34
CUL3-214ENST00000541548 MED23Q9ULK4 1368 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 TIAM1Q13009 1591 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 HTTP42858 3142 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 BOD1L1Q8NFC6 3051 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 HERC2O95714 4834 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 ZFHX3Q15911 3703 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 PRDM15P57071 1507 aaPredicted RBP0.45□□□□□ -2.34
CUL3-214ENST00000541548 ASXL1Q8IXJ9 1541 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 RGPD1P0DJD0 1748 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 FMN2Q9NZ56 1722 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 TENM4Q6N022 2769 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 TRAV36DV7A0A075B6V5 113 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 NBDYA0A0U1RRE5 68 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 A0A1B0GW64 132 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 ADCYAP1P18509 176 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 RHOHQ15669 191 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 CCSMST1Q4G0I0 132 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 TAC4Q86UU9 113 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 C5orf56Q8N8D9 126 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 ATG5Q9H1Y0 275 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 JPT1Q9UK76 154 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 PTPRQQ9UMZ3 2332 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 PZPP20742 1482 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 MYOM2P54296 1465 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 MLH3Q9UHC1 1453 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 ZNF142P52746 1687 aaPredicted RBP0.45□□□□□ -2.34
CUL3-214ENST00000541548 ITSN2Q9NZM3 1697 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 ABCA1O95477 2261 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 KMT2CQ8NEZ4 4911 aaKnown RBP0.45□□□□□ -2.34
CUL3-214ENST00000541548 CCDC180Q9P1Z9 1646 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 NRXN3Q9Y4C0 1643 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 ABCA13Q86UQ4 5058 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 NF1P21359 2839 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 FAM186AA6NE01 2351 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 F8P00451 2351 aa0.45□□□□□ -2.34
CUL3-214ENST00000541548 PAPPA2Q9BXP8 1791 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms