RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 SIX6O95475 246 aa7.44□□□□□ -1.22
COPA-205ENST00000541366 TCRBP04435 133 aa7.44□□□□□ -1.22
COPA-205ENST00000541366 IL7P13232 177 aa7.44□□□□□ -1.22
COPA-205ENST00000541366 RPL19P84098 196 aaKnown RBP7.44□□□□□ -1.22
COPA-205ENST00000541366 PRNTQ86SH4 94 aa7.44□□□□□ -1.22
COPA-205ENST00000541366 NUDT15Q9NV35 164 aa7.44□□□□□ -1.22
COPA-205ENST00000541366 KRTAP9-6A0A140TA67 174 aa7.43□□□□□ -1.22
COPA-205ENST00000541366 H3BVH4 76 aa7.43□□□□□ -1.22
COPA-205ENST00000541366 TCRAP04437 139 aa7.43□□□□□ -1.22
COPA-205ENST00000541366 KRTAP10-8P60410 259 aa7.43□□□□□ -1.22
COPA-205ENST00000541366 UBE2D3P61077 147 aa7.43□□□□□ -1.22
COPA-205ENST00000541366 UBE2D2P62837 147 aa7.43□□□□□ -1.22
COPA-205ENST00000541366 CNPY1Q3B7I2 92 aa7.43□□□□□ -1.22
COPA-205ENST00000541366 LRRC37A5PQ49AS3 106 aa7.43□□□□□ -1.22
COPA-205ENST00000541366 SMUG1Q53HV7 270 aa7.43□□□□□ -1.22
COPA-205ENST00000541366 ARL6IP6Q8N6S5 226 aa7.43□□□□□ -1.22
COPA-205ENST00000541366 MUC2Q02817 5179 aa7.42□□□□□ -1.22
COPA-205ENST00000541366 TRBV6-8A0A0A6YYG3 113 aa7.42□□□□□ -1.22
COPA-205ENST00000541366 A0A0J9YXV3 536 aa7.42□□□□□ -1.22
COPA-205ENST00000541366 SLPIP03973 132 aa7.42□□□□□ -1.22
COPA-205ENST00000541366 RAB2AP61019 212 aa7.42□□□□□ -1.22
COPA-205ENST00000541366 FLI1Q01543 452 aaPredicted RBP7.42□□□□□ -1.22
COPA-205ENST00000541366 PIK3CD-AS1Q5SR53 167 aa7.42□□□□□ -1.22
COPA-205ENST00000541366 SPACA4Q8TDM5 124 aa7.42□□□□□ -1.22
COPA-205ENST00000541366 GRIFINA4D1Z8 144 aa7.41□□□□□ -1.22
COPA-205ENST00000541366 CCDC160A6NGH7 325 aa7.41□□□□□ -1.22
COPA-205ENST00000541366 RHODO00212 210 aa7.41□□□□□ -1.22
COPA-205ENST00000541366 LYRM1O43325 122 aa7.41□□□□□ -1.22
COPA-205ENST00000541366 MIAQ16674 131 aa7.41□□□□□ -1.22
COPA-205ENST00000541366 ZFP69Q49AA0 526 aa7.41□□□□□ -1.22
COPA-205ENST00000541366 PQLC2Q6ZP29 291 aa7.41□□□□□ -1.22
COPA-205ENST00000541366 SMIM3Q9BZL3 60 aa7.41□□□□□ -1.22
COPA-205ENST00000541366 IL36BQ9NZH7 164 aa7.41□□□□□ -1.22
COPA-205ENST00000541366 IGLV10-54A0A075B6I4 117 aa7.4□□□□□ -1.22
COPA-205ENST00000541366 MUC21A0A0G2JKD1 596 aa7.4□□□□□ -1.22
COPA-205ENST00000541366 hDV102S1A0JD36 115 aa7.4□□□□□ -1.22
COPA-205ENST00000541366 PTTG1O95997 202 aa7.4□□□□□ -1.22
COPA-205ENST00000541366 ARMS2P0C7Q2 107 aa7.4□□□□□ -1.22
COPA-205ENST00000541366 ARL14EPLP0DKL9 152 aa7.4□□□□□ -1.22
COPA-205ENST00000541366 CNBPP62633 177 aaKnown RBP7.4□□□□□ -1.22
COPA-205ENST00000541366 RPL36AP83881 106 aaKnown RBP7.4□□□□□ -1.22
COPA-205ENST00000541366 WDR73Q6P4I2 378 aa7.4□□□□□ -1.22
COPA-205ENST00000541366 C5orf17Q8NAS9 161 aa7.4□□□□□ -1.22
COPA-205ENST00000541366 GTSF1Q8WW33 167 aa7.4□□□□□ -1.22
COPA-205ENST00000541366 RPL36ALQ969Q0 106 aaKnown RBP7.4□□□□□ -1.22
COPA-205ENST00000541366 CHCHD5Q9BSY4 110 aa7.4□□□□□ -1.22
COPA-205ENST00000541366 PLAC8Q9NZF1 115 aa7.4□□□□□ -1.22
COPA-205ENST00000541366 TRBV7-3A0A075B6L6 115 aa7.39□□□□□ -1.23
COPA-205ENST00000541366 IGHV3-64A0A075B6Q5 118 aa7.39□□□□□ -1.23
COPA-205ENST00000541366 TRAV34A0A0B4J273 112 aa7.39□□□□□ -1.23
COPA-205ENST00000541366 SERTM2A0A1B0GWG4 89 aa7.39□□□□□ -1.23
COPA-205ENST00000541366 A0A1W2PPV4 95 aa7.39□□□□□ -1.23
COPA-205ENST00000541366 M0R036 132 aa7.39□□□□□ -1.23
COPA-205ENST00000541366 PRR3P79522 188 aaKnown RBP7.39□□□□□ -1.23
COPA-205ENST00000541366 LINC00269Q8N2A0 174 aa7.39□□□□□ -1.23
COPA-205ENST00000541366 OR11H4Q8NGC9 324 aa7.39□□□□□ -1.23
COPA-205ENST00000541366 C7orf33Q8WU49 177 aa7.39□□□□□ -1.23
COPA-205ENST00000541366 RNF185Q96GF1 192 aa7.39□□□□□ -1.23
COPA-205ENST00000541366 SFRP2Q96HF1 295 aa7.39□□□□□ -1.23
COPA-205ENST00000541366 PRR34Q9NV39 138 aa7.39□□□□□ -1.23
COPA-205ENST00000541366 B4DEV8 164 aa7.38□□□□□ -1.23
COPA-205ENST00000541366 M0R381 172 aa7.38□□□□□ -1.23
COPA-205ENST00000541366 RBX1P62877 108 aa7.38□□□□□ -1.23
COPA-205ENST00000541366 SUMO1P63165 101 aaKnown RBP7.38□□□□□ -1.23
COPA-205ENST00000541366 SCGB1C1Q8TD33 95 aa7.38□□□□□ -1.23
COPA-205ENST00000541366 WFDC1Q9HC57 220 aa7.38□□□□□ -1.23
COPA-205ENST00000541366 EPDR1Q9UM22 224 aa7.38□□□□□ -1.23
COPA-205ENST00000541366 HSPB11Q9Y547 144 aa7.38□□□□□ -1.23
COPA-205ENST00000541366 TRBV10-1A0A0K0K1A3 114 aa7.37□□□□□ -1.23
COPA-205ENST00000541366 FABP5P3A8MUU1 101 aa7.37□□□□□ -1.23
COPA-205ENST00000541366 KRBOX1C9JBD0 128 aa7.37□□□□□ -1.23
COPA-205ENST00000541366 K7EQM0 130 aa7.37□□□□□ -1.23
COPA-205ENST00000541366 CRIP1P50238 77 aa7.37□□□□□ -1.23
COPA-205ENST00000541366 GAGE6Q13070 117 aa7.37□□□□□ -1.23
COPA-205ENST00000541366 NTM-AS1Q6ZSK4 140 aa7.37□□□□□ -1.23
COPA-205ENST00000541366 NEXN-AS1Q8NBZ9 246 aa7.37□□□□□ -1.23
COPA-205ENST00000541366 CLRN3Q8NCR9 226 aa7.37□□□□□ -1.23
COPA-205ENST00000541366 LYPD6BQ8NI32 183 aa7.37□□□□□ -1.23
COPA-205ENST00000541366 ARL2-SNX15V9GYD0 113 aa7.37□□□□□ -1.23
COPA-205ENST00000541366 TMSB15BA0A087X1C1 80 aa7.36□□□□□ -1.23
COPA-205ENST00000541366 RAB5CP51148 216 aa7.36□□□□□ -1.23
COPA-205ENST00000541366 COX6A2Q02221 97 aa7.36□□□□□ -1.23
COPA-205ENST00000541366 SAPCD1Q5SSQ6 148 aa7.36□□□□□ -1.23
COPA-205ENST00000541366 OR10G8Q8NGN5 311 aa7.36□□□□□ -1.23
COPA-205ENST00000541366 PHLDA3Q9Y5J5 127 aa7.36□□□□□ -1.23
COPA-205ENST00000541366 IGKV2-24A0A0C4DH68 120 aa7.35□□□□□ -1.23
COPA-205ENST00000541366 GCHFRP30047 84 aa7.35□□□□□ -1.23
COPA-205ENST00000541366 MAJINQ3KP22 176 aa7.35□□□□□ -1.23
COPA-205ENST00000541366 DNLZQ5SXM8 178 aa7.35□□□□□ -1.23
COPA-205ENST00000541366 PRSS3P2Q8NHM4 247 aa7.35□□□□□ -1.23
COPA-205ENST00000541366 RBM38Q9H0Z9 239 aaKnown RBP7.35□□□□□ -1.23
COPA-205ENST00000541366 FAT4Q6V0I7 4981 aa7.34□□□□□ -1.23
COPA-205ENST00000541366 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.34□□□□□ -1.23
COPA-205ENST00000541366 STAG3L2P0CL84 134 aa7.34□□□□□ -1.23
COPA-205ENST00000541366 STAG3L3P0CL85 134 aa7.34□□□□□ -1.23
COPA-205ENST00000541366 TPT1P13693 172 aaKnown RBP7.34□□□□□ -1.23
COPA-205ENST00000541366 CDC34P49427 236 aaPredicted RBP7.34□□□□□ -1.23
COPA-205ENST00000541366 REG3AQ06141 175 aa7.34□□□□□ -1.23
COPA-205ENST00000541366 SUN5Q8TC36 379 aa7.34□□□□□ -1.23
COPA-205ENST00000541366 RAB24Q969Q5 203 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms