RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 C10orf99Q6UWK7 81 aa7.09□□□□□ -1.28
CNOT4-212ENST00000541284 HIST1H4GQ99525 98 aa7.09□□□□□ -1.28
CNOT4-212ENST00000541284 DOPEY1Q5JWR5 2465 aa7.08□□□□□ -1.28
CNOT4-212ENST00000541284 CD7P09564 240 aa7.08□□□□□ -1.28
CNOT4-212ENST00000541284 PSMB8P28062 276 aa7.08□□□□□ -1.28
CNOT4-212ENST00000541284 RPL39P62891 51 aaKnown RBP7.08□□□□□ -1.28
CNOT4-212ENST00000541284 AMTNQ6UX39 209 aa7.08□□□□□ -1.28
CNOT4-212ENST00000541284 USP9XQ93008 2570 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-212ENST00000541284 APCP25054 2843 aa7.08□□□□□ -1.28
CNOT4-212ENST00000541284 DNAH3Q8TD57 4116 aa7.08□□□□□ -1.28
CNOT4-212ENST00000541284 H3BMG7 143 aa7.08□□□□□ -1.28
CNOT4-212ENST00000541284 LGALS9O00182 355 aa7.08□□□□□ -1.28
CNOT4-212ENST00000541284 PIMREGQ9BSJ6 248 aa7.08□□□□□ -1.28
CNOT4-212ENST00000541284 CYSLTR1Q9Y271 337 aa7.08□□□□□ -1.28
CNOT4-212ENST00000541284 PRRC2AP48634 2157 aaKnown RBP7.08□□□□□ -1.28
CNOT4-212ENST00000541284 TRBV6-5A0A0K0K1A5 114 aa7.08□□□□□ -1.28
CNOT4-212ENST00000541284 KLHL30-AS1Q8NEE0 82 aa7.08□□□□□ -1.28
CNOT4-212ENST00000541284 ZNRF2Q8NHG8 242 aa7.08□□□□□ -1.28
CNOT4-212ENST00000541284 DEFB104AQ8WTQ1 72 aa7.08□□□□□ -1.28
CNOT4-212ENST00000541284 TP53TG1Q9Y2A0 90 aa7.08□□□□□ -1.28
CNOT4-212ENST00000541284 IGHV3-16A0A0C4DH30 117 aa7.07□□□□□ -1.28
CNOT4-212ENST00000541284 SMCPP49901 116 aaPredicted RBP7.07□□□□□ -1.28
CNOT4-212ENST00000541284 WFDC12Q8WWY7 111 aa7.07□□□□□ -1.28
CNOT4-212ENST00000541284 TRBV27A0A0K0K1C4 114 aa7.07□□□□□ -1.28
CNOT4-212ENST00000541284 F8W1H4 67 aa7.07□□□□□ -1.28
CNOT4-212ENST00000541284 A0A087WWL8 130 aa7.07□□□□□ -1.28
CNOT4-212ENST00000541284 MDFICQ9P1T7 246 aa7.07□□□□□ -1.28
CNOT4-212ENST00000541284 A0A0J9YY99 117 aa7.06□□□□□ -1.28
CNOT4-212ENST00000541284 NDUFS8O00217 210 aa7.06□□□□□ -1.28
CNOT4-212ENST00000541284 EIF4EBP3O60516 100 aaPredicted RBP7.06□□□□□ -1.28
CNOT4-212ENST00000541284 RPL11P62913 178 aaKnown RBP7.06□□□□□ -1.28
CNOT4-212ENST00000541284 SH2D6Q7Z4S9 175 aa7.06□□□□□ -1.28
CNOT4-212ENST00000541284 FAM104AQ969W3 186 aa7.06□□□□□ -1.28
CNOT4-212ENST00000541284 PPP1R17O96001 155 aa7.06□□□□□ -1.28
CNOT4-212ENST00000541284 MSMBP08118 114 aa7.06□□□□□ -1.28
CNOT4-212ENST00000541284 P0DMU3 169 aa7.06□□□□□ -1.28
CNOT4-212ENST00000541284 FAM231AP0DMU4 169 aa7.06□□□□□ -1.28
CNOT4-212ENST00000541284 FAM231CP0DMU5 169 aa7.06□□□□□ -1.28
CNOT4-212ENST00000541284 ODF3Q96PU9 254 aa7.06□□□□□ -1.28
CNOT4-212ENST00000541284 TRAV12-3A0A0B4J271 114 aa7.05□□□□□ -1.28
CNOT4-212ENST00000541284 A0A0J9YX75 114 aa7.05□□□□□ -1.28
CNOT4-212ENST00000541284 ZNF815PA8K554 130 aa7.05□□□□□ -1.28
CNOT4-212ENST00000541284 M0QY20 66 aa7.05□□□□□ -1.28
CNOT4-212ENST00000541284 EMP1P54849 157 aa7.05□□□□□ -1.28
CNOT4-212ENST00000541284 ZNF876PQ49A33 203 aa7.05□□□□□ -1.28
CNOT4-212ENST00000541284 RNF152Q8N8N0 203 aa7.05□□□□□ -1.28
CNOT4-212ENST00000541284 TIMM17AQ99595 171 aa7.05□□□□□ -1.28
CNOT4-212ENST00000541284 ZANQ9Y493 2812 aa7.05□□□□□ -1.28
CNOT4-212ENST00000541284 TMEM238C9JI98 176 aa7.05□□□□□ -1.28
CNOT4-212ENST00000541284 INSL3P51460 131 aa7.05□□□□□ -1.28
CNOT4-212ENST00000541284 MTURNQ8N3F0 131 aa7.05□□□□□ -1.28
CNOT4-212ENST00000541284 SPAG8Q99932 426 aaPredicted RBP7.05□□□□□ -1.28
CNOT4-212ENST00000541284 TSPAN13O95857 204 aa7.05□□□□□ -1.28
CNOT4-212ENST00000541284 CCL19Q99731 98 aa7.05□□□□□ -1.28
CNOT4-212ENST00000541284 SDHAF1A6NFY7 115 aa7.04□□□□□ -1.28
CNOT4-212ENST00000541284 K7EQG2 157 aa7.04□□□□□ -1.28
CNOT4-212ENST00000541284 UBE2D3P61077 147 aa7.04□□□□□ -1.28
CNOT4-212ENST00000541284 UBE2D2P62837 147 aa7.04□□□□□ -1.28
CNOT4-212ENST00000541284 PMVKQ15126 192 aa7.04□□□□□ -1.28
CNOT4-212ENST00000541284 CD300EQ496F6 205 aaPredicted RBP7.04□□□□□ -1.28
CNOT4-212ENST00000541284 CLEC2AQ6UVW9 174 aa7.04□□□□□ -1.28
CNOT4-212ENST00000541284 RBMY1A1P0DJD3 496 aaKnown RBP7.04□□□□□ -1.28
CNOT4-212ENST00000541284 RBMY1CP0DJD4 496 aa7.04□□□□□ -1.28
CNOT4-212ENST00000541284 RPL24P83731 157 aaKnown RBP7.04□□□□□ -1.28
CNOT4-212ENST00000541284 RBMY1FQ15415 496 aaKnown RBP7.04□□□□□ -1.28
CNOT4-212ENST00000541284 TRAV12-2A0A075B6T6 113 aa7.04□□□□□ -1.28
CNOT4-212ENST00000541284 FAM159AQ6UWV7 190 aa7.04□□□□□ -1.28
CNOT4-212ENST00000541284 TMEM141Q96I45 108 aa7.04□□□□□ -1.28
CNOT4-212ENST00000541284 VCYO14598 125 aa7.03□□□□□ -1.28
CNOT4-212ENST00000541284 IGHV3-30P01768 117 aa7.03□□□□□ -1.28
CNOT4-212ENST00000541284 IGHV4-59P01825 116 aa7.03□□□□□ -1.28
CNOT4-212ENST00000541284 IGHV3-30-5P0DP03 117 aa7.03□□□□□ -1.28
CNOT4-212ENST00000541284 NSUN5P1Q3KNT7 163 aa7.03□□□□□ -1.28
CNOT4-212ENST00000541284 ETDBQ3ZM63 59 aa7.03□□□□□ -1.28
CNOT4-212ENST00000541284 CFAP126Q5VTH2 177 aa7.03□□□□□ -1.28
CNOT4-212ENST00000541284 Q8N1Y9 231 aa7.03□□□□□ -1.28
CNOT4-212ENST00000541284 ZNF843Q8N446 348 aa7.03□□□□□ -1.28
CNOT4-212ENST00000541284 OPRPNQ99935 248 aaPredicted RBP7.03□□□□□ -1.28
CNOT4-212ENST00000541284 SPATA25Q9BR10 227 aa7.03□□□□□ -1.28
CNOT4-212ENST00000541284 PGPEP1Q9NXJ5 209 aa7.03□□□□□ -1.28
CNOT4-212ENST00000541284 HOXA3O43365 443 aaPredicted RBP7.03□□□□□ -1.28
CNOT4-212ENST00000541284 ZNF688P0C7X2 276 aa7.03□□□□□ -1.28
CNOT4-212ENST00000541284 NFE4Q86UQ8 179 aa7.03□□□□□ -1.28
CNOT4-212ENST00000541284 ZNF256Q9Y2P7 627 aaPredicted RBP7.03□□□□□ -1.28
CNOT4-212ENST00000541284 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.03□□□□□ -1.282e-7■■□□□ 11.4
CNOT4-212ENST00000541284 LINC01549A6NIU2 74 aa7.02□□□□□ -1.29
CNOT4-212ENST00000541284 TSSC4Q9Y5U2 329 aaPredicted RBP7.02□□□□□ -1.29
CNOT4-212ENST00000541284 NACAE9PAV3 2078 aa7.02□□□□□ -1.29
CNOT4-212ENST00000541284 DEFB112Q30KQ8 113 aa7.02□□□□□ -1.29
CNOT4-212ENST00000541284 GAGE13Q4V321 117 aa7.02□□□□□ -1.29
CNOT4-212ENST00000541284 NDUFA11Q86Y39 141 aa7.02□□□□□ -1.29
CNOT4-212ENST00000541284 SLC25A29Q8N8R3 303 aa7.02□□□□□ -1.29
CNOT4-212ENST00000541284 CFC1BP0CG36 223 aa7.02□□□□□ -1.29
CNOT4-212ENST00000541284 CFC1P0CG37 223 aa7.02□□□□□ -1.29
CNOT4-212ENST00000541284 ID1P41134 155 aa7.01□□□□□ -1.29
CNOT4-212ENST00000541284 ATP5J2P56134 94 aa7.01□□□□□ -1.29
CNOT4-212ENST00000541284 FHL3Q13643 280 aa7.01□□□□□ -1.29
CNOT4-212ENST00000541284 DOPEY2Q9Y3R5 2298 aa7.01□□□□□ -1.29
CNOT4-212ENST00000541284 SAMD13Q5VXD3 122 aa7.01□□□□□ -1.29
CNOT4-212ENST00000541284 NRGNQ92686 78 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms