RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 FANCMQ8IYD8 2048 aa2.78□□□□□ -1.96
YBX3-210ENST00000540975 MCM3APO60318 1980 aa2.78□□□□□ -1.97
YBX3-210ENST00000540975 PLXNB3Q9ULL4 1909 aa2.78□□□□□ -1.97
YBX3-210ENST00000540975 PAPPA2Q9BXP8 1791 aa2.77□□□□□ -1.97
YBX3-210ENST00000540975 A0A0J9YXV3 536 aa2.77□□□□□ -1.97
YBX3-210ENST00000540975 PSPHP1O15172 72 aa2.77□□□□□ -1.97
YBX3-210ENST00000540975 IGHV3-7P01780 117 aa2.77□□□□□ -1.97
YBX3-210ENST00000540975 CD7P09564 240 aa2.77□□□□□ -1.97
YBX3-210ENST00000540975 COL8A2P25067 703 aa2.77□□□□□ -1.97
YBX3-210ENST00000540975 ZNF80P51504 273 aaPredicted RBP2.77□□□□□ -1.97
YBX3-210ENST00000540975 HBBP68871 147 aa2.77□□□□□ -1.97
YBX3-210ENST00000540975 MRPS36P82909 103 aaKnown RBP2.77□□□□□ -1.97
YBX3-210ENST00000540975 FBXL19-AS1Q494R0 122 aa2.77□□□□□ -1.97
YBX3-210ENST00000540975 Q6ZQT7 251 aa2.77□□□□□ -1.97
YBX3-210ENST00000540975 FP248Q71RG6 208 aaPredicted RBP2.77□□□□□ -1.97
YBX3-210ENST00000540975 SBSPONQ8IVN8 264 aa2.77□□□□□ -1.97
YBX3-210ENST00000540975 C15orf53Q8NAA6 179 aa2.77□□□□□ -1.97
YBX3-210ENST00000540975 CIRBP-AS1Q8TBR5 109 aa2.77□□□□□ -1.97
YBX3-210ENST00000540975 TIMM17AQ99595 171 aa2.77□□□□□ -1.97
YBX3-210ENST00000540975 SMIM7Q9BQ49 75 aa2.77□□□□□ -1.97
YBX3-210ENST00000540975 SHANK1Q9Y566 2161 aa2.77□□□□□ -1.97
YBX3-210ENST00000540975 TNS1Q9HBL0 1735 aaKnown RBP2.76□□□□□ -1.97
YBX3-210ENST00000540975 KMT2EQ8IZD2 1858 aa2.76□□□□□ -1.97
YBX3-210ENST00000540975 MYO16Q9Y6X6 1858 aa2.76□□□□□ -1.97
YBX3-210ENST00000540975 IGHV6-1A0A0B4J1U7 121 aa2.76□□□□□ -1.97
YBX3-210ENST00000540975 hADV29S1A0JD25 119 aa2.76□□□□□ -1.97
YBX3-210ENST00000540975 C2orf70A6NJV1 201 aa2.76□□□□□ -1.97
YBX3-210ENST00000540975 K7ERJ3 54 aa2.76□□□□□ -1.97
YBX3-210ENST00000540975 SDCBPO00560 298 aaPredicted RBP2.76□□□□□ -1.97
YBX3-210ENST00000540975 SSR2P43308 183 aa2.76□□□□□ -1.97
YBX3-210ENST00000540975 CLLU1OSQ5K130 101 aa2.76□□□□□ -1.97
YBX3-210ENST00000540975 LINC01590Q5TEZ4 76 aa2.76□□□□□ -1.97
YBX3-210ENST00000540975 MIC13Q5XKP0 118 aa2.76□□□□□ -1.97
YBX3-210ENST00000540975 PHF5AQ7RTV0 110 aaKnown RBP2.76□□□□□ -1.97
YBX3-210ENST00000540975 FAM57AQ8TBR7 257 aa2.76□□□□□ -1.97
YBX3-210ENST00000540975 H1FXQ92522 213 aaKnown RBP2.76□□□□□ -1.97
YBX3-210ENST00000540975 ABHD14BQ96IU4 210 aa2.76□□□□□ -1.97
YBX3-210ENST00000540975 Q96M85 177 aa2.76□□□□□ -1.97
YBX3-210ENST00000540975 TTTY10Q9BZA0 68 aa2.76□□□□□ -1.97
YBX3-210ENST00000540975 GNG13Q9P2W3 67 aa2.76□□□□□ -1.97
YBX3-210ENST00000540975 LINC00588Q9Y4M8 146 aa2.76□□□□□ -1.97
YBX3-210ENST00000540975 IGKV1-27A0A075B6S5 117 aa2.75□□□□□ -1.97
YBX3-210ENST00000540975 IGKV1-8A0A0C4DH67 115 aa2.75□□□□□ -1.97
YBX3-210ENST00000540975 MDFIC2A0A1B0GVS7 189 aa2.75□□□□□ -1.97
YBX3-210ENST00000540975 CRYM-AS1A6NIL9 109 aa2.75□□□□□ -1.97
YBX3-210ENST00000540975 CPSF4LA6NMK7 179 aaKnown RBP2.75□□□□□ -1.97
YBX3-210ENST00000540975 ATOX1O00244 68 aa2.75□□□□□ -1.97
YBX3-210ENST00000540975 IGKV1-5P01602 117 aa2.75□□□□□ -1.97
YBX3-210ENST00000540975 SMIM13P0DJ93 91 aa2.75□□□□□ -1.97
YBX3-210ENST00000540975 MPV17P39210 176 aa2.75□□□□□ -1.97
YBX3-210ENST00000540975 CSN1S1P47710 185 aa2.75□□□□□ -1.97
YBX3-210ENST00000540975 UBE2G1P62253 170 aa2.75□□□□□ -1.97
YBX3-210ENST00000540975 TMEM155Q4W5P6 130 aa2.75□□□□□ -1.97
YBX3-210ENST00000540975 CFAP126Q5VTH2 177 aa2.75□□□□□ -1.97
YBX3-210ENST00000540975 EBLN2Q6P2I7 272 aa2.75□□□□□ -1.97
YBX3-210ENST00000540975 TMEM136Q6ZRR5 245 aa2.75□□□□□ -1.97
YBX3-210ENST00000540975 MARCH3Q86UD3 253 aa2.75□□□□□ -1.97
YBX3-210ENST00000540975 Q8N2B8 174 aa2.75□□□□□ -1.97
YBX3-210ENST00000540975 TSKUQ8WUA8 353 aa2.75□□□□□ -1.97
YBX3-210ENST00000540975 UPK3BQ9BT76 320 aa2.75□□□□□ -1.97
YBX3-210ENST00000540975 PLXNA2O75051 1894 aa2.75□□□□□ -1.97
YBX3-210ENST00000540975 CACNA1AO00555 2505 aa2.75□□□□□ -1.97
YBX3-210ENST00000540975 NINQ8N4C6 2090 aa2.74□□□□□ -1.97
YBX3-210ENST00000540975 TRAV2A0A0B4J234 112 aa2.74□□□□□ -1.97
YBX3-210ENST00000540975 IGHV1-69DA0A0B4J2H0 117 aa2.74□□□□□ -1.97
YBX3-210ENST00000540975 CEBPZOSA8MTT3 80 aa2.74□□□□□ -1.97
YBX3-210ENST00000540975 BUB1B-PAK6H3BSN5 160 aa2.74□□□□□ -1.97
YBX3-210ENST00000540975 HBDP02042 147 aa2.74□□□□□ -1.97
YBX3-210ENST00000540975 COX8AP10176 69 aa2.74□□□□□ -1.97
YBX3-210ENST00000540975 NPPCP23582 126 aa2.74□□□□□ -1.97
YBX3-210ENST00000540975 PEBP1P30086 187 aaKnown RBP2.74□□□□□ -1.97
YBX3-210ENST00000540975 DYNLT3P51808 116 aa2.74□□□□□ -1.97
YBX3-210ENST00000540975 UBE2BP63146 152 aa2.74□□□□□ -1.97
YBX3-210ENST00000540975 SS18Q15532 418 aa2.74□□□□□ -1.97
YBX3-210ENST00000540975 BAGE3Q86Y29 109 aa2.74□□□□□ -1.97
YBX3-210ENST00000540975 BAGE2Q86Y30 109 aa2.74□□□□□ -1.97
YBX3-210ENST00000540975 OR5AS1Q8N127 324 aa2.74□□□□□ -1.97
YBX3-210ENST00000540975 ZNF706Q9Y5V0 76 aaPredicted RBP2.74□□□□□ -1.97
YBX3-210ENST00000540975 CASP8AP2Q9UKL3 1982 aa2.74□□□□□ -1.97
YBX3-210ENST00000540975 FBN1P35555 2871 aaKnown RBP2.73□□□□□ -1.97
YBX3-210ENST00000540975 PKD1L2Q7Z442 2459 aa2.73□□□□□ -1.97
YBX3-210ENST00000540975 IGKV1-9A0A0C4DH69 117 aa2.73□□□□□ -1.97
YBX3-210ENST00000540975 UBE2L5PA0A1B0GUS4 154 aa2.73□□□□□ -1.97
YBX3-210ENST00000540975 TMEM14DPA8MWL7 114 aa2.73□□□□□ -1.97
YBX3-210ENST00000540975 ATP5EP56381 51 aaPredicted RBP2.73□□□□□ -1.97
YBX3-210ENST00000540975 UBE2L3P68036 154 aaKnown RBP2.73□□□□□ -1.97
YBX3-210ENST00000540975 CCL8P80075 99 aa2.73□□□□□ -1.97
YBX3-210ENST00000540975 RBMY1FQ15415 496 aaKnown RBP2.73□□□□□ -1.97
YBX3-210ENST00000540975 C7orf65Q6ZTY9 151 aa2.73□□□□□ -1.97
YBX3-210ENST00000540975 MDP1Q86V88 176 aa2.73□□□□□ -1.97
YBX3-210ENST00000540975 GPHB5Q86YW7 130 aa2.73□□□□□ -1.97
YBX3-210ENST00000540975 PFN4Q8NHR9 129 aa2.73□□□□□ -1.97
YBX3-210ENST00000540975 ODF3Q96PU9 254 aa2.73□□□□□ -1.97
YBX3-210ENST00000540975 MGST2Q99735 147 aa2.73□□□□□ -1.97
YBX3-210ENST00000540975 FAM103A1Q9BTL3 118 aaKnown RBP2.73□□□□□ -1.97
YBX3-210ENST00000540975 TMEM243Q9BU79 118 aa2.73□□□□□ -1.97
YBX3-210ENST00000540975 ZNF286AQ9HBT8 521 aa2.73□□□□□ -1.97
YBX3-210ENST00000540975 IL36BQ9NZH7 164 aa2.73□□□□□ -1.97
YBX3-210ENST00000540975 EPDR1Q9UM22 224 aa2.73□□□□□ -1.97
YBX3-210ENST00000540975 HEATR5AQ86XA9 2040 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms