RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-204ENST00000540803 ZFP82Q8N141 532 aa12.95□□□□□ -0.34
RAB35-204ENST00000540803 GTSF1LQ9H1H1 148 aa12.95□□□□□ -0.34
RAB35-204ENST00000540803 A0A087WWL8 130 aa12.94□□□□□ -0.34
RAB35-204ENST00000540803 GAGE12JA6NER3 117 aa12.94□□□□□ -0.34
RAB35-204ENST00000540803 KRTAP10-2P60368 255 aa12.94□□□□□ -0.34
RAB35-204ENST00000540803 GAGE1Q13065 139 aa12.94□□□□□ -0.34
RAB35-204ENST00000540803 GAGE4Q13068 117 aa12.94□□□□□ -0.34
RAB35-204ENST00000540803 GAGE5Q13069 117 aa12.94□□□□□ -0.34
RAB35-204ENST00000540803 GAGE13Q4V321 117 aa12.94□□□□□ -0.34
RAB35-204ENST00000540803 LINC01556Q5JQF7 62 aa12.94□□□□□ -0.34
RAB35-204ENST00000540803 OR10J3Q5JRS4 329 aa12.94□□□□□ -0.34
RAB35-204ENST00000540803 LELP1Q5T871 98 aa12.94□□□□□ -0.34
RAB35-204ENST00000540803 NFE4Q86UQ8 179 aa12.94□□□□□ -0.34
RAB35-204ENST00000540803 MSRB1Q9NZV6 116 aa12.94□□□□□ -0.34
RAB35-204ENST00000540803 TRAV8-6A0A0B4J262 113 aa12.93□□□□□ -0.34
RAB35-204ENST00000540803 MEF2BQ02080 365 aaPredicted RBP12.93□□□□□ -0.34
RAB35-204ENST00000540803 CENPWQ5EE01 88 aa12.93□□□□□ -0.34
RAB35-204ENST00000540803 C10orf126Q8N4M7 172 aa12.93□□□□□ -0.34
RAB35-204ENST00000540803 IGLV2-8P01709 118 aa12.92□□□□□ -0.34
RAB35-204ENST00000540803 OR10AG1Q8NH19 301 aa12.92□□□□□ -0.34
RAB35-204ENST00000540803 SNAI2O43623 268 aa12.91□□□□□ -0.34
RAB35-204ENST00000540803 IFNA1P01562 189 aa12.91□□□□□ -0.34
RAB35-204ENST00000540803 BCL2P10415 239 aa12.91□□□□□ -0.34
RAB35-204ENST00000540803 SSBP4Q9BWG4 385 aaPredicted RBP12.91□□□□□ -0.34
RAB35-204ENST00000540803 RAB19A4D1S5 217 aa12.9□□□□□ -0.34
RAB35-204ENST00000540803 PDE6DO43924 150 aa12.9□□□□□ -0.34
RAB35-204ENST00000540803 BOLA1Q9Y3E2 137 aa12.9□□□□□ -0.34
RAB35-204ENST00000540803 OR5AL1P0C617 328 aa12.89□□□□□ -0.35
RAB35-204ENST00000540803 ERVFC1-1P60608 527 aa12.89□□□□□ -0.35
RAB35-204ENST00000540803 MUC21A0A0G2JKD1 596 aa12.88□□□□□ -0.35
RAB35-204ENST00000540803 MUC21A0A140T8X8 626 aa12.88□□□□□ -0.35
RAB35-204ENST00000540803 IBA57-AS1B1ANH7 110 aa12.88□□□□□ -0.35
RAB35-204ENST00000540803 IGHV3-30P01768 117 aa12.88□□□□□ -0.35
RAB35-204ENST00000540803 IGHV3-33P01772 117 aa12.88□□□□□ -0.35
RAB35-204ENST00000540803 IGHV3-30-3P0DP02 117 aa12.88□□□□□ -0.35
RAB35-204ENST00000540803 IGHV3-30-5P0DP03 117 aa12.88□□□□□ -0.35
RAB35-204ENST00000540803 GNG4P50150 75 aa12.88□□□□□ -0.35
RAB35-204ENST00000540803 SMIM12Q96EX1 92 aa12.88□□□□□ -0.35
RAB35-204ENST00000540803 MED9Q9NWA0 146 aa12.88□□□□□ -0.35
RAB35-204ENST00000540803 VAX2Q9UIW0 290 aa12.88□□□□□ -0.35
RAB35-204ENST00000540803 TRBV20OR9-2A0A075B6H5 130 aa12.87□□□□□ -0.35
RAB35-204ENST00000540803 A0A087WTM6 91 aa12.87□□□□□ -0.35
RAB35-204ENST00000540803 C19orf71A6NCJ1 209 aa12.87□□□□□ -0.35
RAB35-204ENST00000540803 Q8N3U1 123 aa12.87□□□□□ -0.35
RAB35-204ENST00000540803 PCLOQ9Y6V0 5065 aa12.86□□□□□ -0.35
RAB35-204ENST00000540803 TRBV10-1A0A0K0K1A3 114 aa12.86□□□□□ -0.35
RAB35-204ENST00000540803 SPANXN1Q5VSR9 72 aa12.86□□□□□ -0.35
RAB35-204ENST00000540803 ALKAL2Q6UX46 152 aa12.86□□□□□ -0.35
RAB35-204ENST00000540803 A0A087WWC5 75 aa12.85□□□□□ -0.35
RAB35-204ENST00000540803 A0A1B0GVG6 124 aa12.85□□□□□ -0.35
RAB35-204ENST00000540803 EREGO14944 169 aa12.85□□□□□ -0.35
RAB35-204ENST00000540803 CDK2AP2O75956 126 aa12.85□□□□□ -0.35
RAB35-204ENST00000540803 GZMBP10144 247 aa12.85□□□□□ -0.35
RAB35-204ENST00000540803 TAGLN2P37802 199 aaKnown RBP12.85□□□□□ -0.35
RAB35-204ENST00000540803 RAB4BP61018 213 aa12.85□□□□□ -0.35
RAB35-204ENST00000540803 DAZAP1Q96EP5 407 aaKnown RBP12.85□□□□□ -0.35
RAB35-204ENST00000540803 IGLC6P0CF74 106 aa12.84□□□□□ -0.35
RAB35-204ENST00000540803 FUSP35637 526 aaKnown RBP eCLIP12.84□□□□□ -0.35
RAB35-204ENST00000540803 SSTP61278 116 aa12.84□□□□□ -0.35
RAB35-204ENST00000540803 OR2D3Q8NGH3 330 aa12.84□□□□□ -0.35
RAB35-204ENST00000540803 NKX2-5P52952 324 aaPredicted RBP12.83□□□□□ -0.36
RAB35-204ENST00000540803 RPS20P60866 119 aaKnown RBP12.83□□□□□ -0.36
RAB35-204ENST00000540803 UBE2D3P61077 147 aa12.83□□□□□ -0.36
RAB35-204ENST00000540803 UBE2D2P62837 147 aa12.83□□□□□ -0.36
RAB35-204ENST00000540803 RPL36AP83881 106 aaKnown RBP12.83□□□□□ -0.36
RAB35-204ENST00000540803 ZNF56Q15929 161 aa12.83□□□□□ -0.36
RAB35-204ENST00000540803 OR10G8Q8NGN5 311 aa12.83□□□□□ -0.36
RAB35-204ENST00000540803 RPL36ALQ969Q0 106 aaKnown RBP12.83□□□□□ -0.36
RAB35-204ENST00000540803 Q9HAA7 133 aa12.83□□□□□ -0.36
RAB35-204ENST00000540803 TRBV7-3A0A075B6L6 115 aa12.82□□□□□ -0.36
RAB35-204ENST00000540803 RBFOX3A6NFN3 312 aa12.82□□□□□ -0.36
RAB35-204ENST00000540803 BLOC1S1P78537 153 aa12.82□□□□□ -0.36
RAB35-204ENST00000540803 LAGE3Q14657 143 aa12.82□□□□□ -0.36
RAB35-204ENST00000540803 FER1L6-AS1Q8NA97 138 aa12.82□□□□□ -0.36
RAB35-204ENST00000540803 LYPD6BQ8NI32 183 aa12.82□□□□□ -0.36
RAB35-204ENST00000540803 KRTAP17-1Q9BYP8 105 aa12.82□□□□□ -0.36
RAB35-204ENST00000540803 PGPEP1Q9NXJ5 209 aa12.82□□□□□ -0.36
RAB35-204ENST00000540803 KIF25-AS1Q9Y6Z4 181 aa12.82□□□□□ -0.36
RAB35-204ENST00000540803 P01737 135 aa12.81□□□□□ -0.36
RAB35-204ENST00000540803 NEXN-AS1Q8NBZ9 246 aa12.81□□□□□ -0.36
RAB35-204ENST00000540803 TPPP3Q9BW30 176 aa12.81□□□□□ -0.36
RAB35-204ENST00000540803 BIN3Q9NQY0 253 aa12.81□□□□□ -0.36
RAB35-204ENST00000540803 ABCA13Q86UQ4 5058 aa12.8□□□□□ -0.36
RAB35-204ENST00000540803 PSCAO43653 123 aa12.8□□□□□ -0.36
RAB35-204ENST00000540803 CDPF1Q6NVV7 123 aa12.8□□□□□ -0.36
RAB35-204ENST00000540803 DAZ4Q86SG3 579 aaKnown RBP12.8□□□□□ -0.36
RAB35-204ENST00000540803 AP1S3Q96PC3 154 aa12.8□□□□□ -0.36
RAB35-204ENST00000540803 DAZ3Q9NR90 486 aaKnown RBP12.8□□□□□ -0.36
RAB35-204ENST00000540803 LRCOL1A6NCL2 159 aa12.79□□□□□ -0.36
RAB35-204ENST00000540803 NIT1Q86X76 327 aa12.79□□□□□ -0.36
RAB35-204ENST00000540803 XKRY2A2RUG3 117 aa12.78□□□□□ -0.36
RAB35-204ENST00000540803 F5H697 171 aa12.78□□□□□ -0.36
RAB35-204ENST00000540803 K7EN84 100 aa12.78□□□□□ -0.36
RAB35-204ENST00000540803 SMIM17P0DL12 118 aa12.78□□□□□ -0.36
RAB35-204ENST00000540803 NUDT10Q8NFP7 164 aa12.78□□□□□ -0.36
RAB35-204ENST00000540803 NUDT11Q96G61 164 aa12.78□□□□□ -0.36
RAB35-204ENST00000540803 DNAH8Q96JB1 4490 aa12.78□□□□□ -0.36
RAB35-204ENST00000540803 CACNG7P62955 275 aa12.77□□□□□ -0.37
RAB35-204ENST00000540803 OCC1Q8TAD7 63 aa12.77□□□□□ -0.37
RAB35-204ENST00000540803 F2Z2F3 143 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms