RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 PHLDA3Q9Y5J5 127 aa7.45□□□□□ -1.22
VPS33A-204ENST00000540669 TENM2Q9NT68 2774 aa7.44□□□□□ -1.22
VPS33A-204ENST00000540669 TRGV1A0A0A0MS02 117 aa7.44□□□□□ -1.22
VPS33A-204ENST00000540669 A8MWV9 139 aa7.44□□□□□ -1.22
VPS33A-204ENST00000540669 NTF3P20783 257 aa7.44□□□□□ -1.22
VPS33A-204ENST00000540669 FAM3BP58499 235 aaPredicted RBP7.44□□□□□ -1.22
VPS33A-204ENST00000540669 CBLN2Q8IUK8 224 aa7.44□□□□□ -1.22
VPS33A-204ENST00000540669 SYT8Q8NBV8 401 aa7.44□□□□□ -1.22
VPS33A-204ENST00000540669 BTF3L4Q96K17 158 aa7.44□□□□□ -1.22
VPS33A-204ENST00000540669 AP1S3Q96PC3 154 aa7.44□□□□□ -1.22
VPS33A-204ENST00000540669 TMEM191AQ9H0A3 160 aa7.44□□□□□ -1.22
VPS33A-204ENST00000540669 JPT2Q9H910 190 aa7.44□□□□□ -1.22
VPS33A-204ENST00000540669 M0R381 172 aa7.43□□□□□ -1.22
VPS33A-204ENST00000540669 CIDEAO60543 219 aa7.43□□□□□ -1.22
VPS33A-204ENST00000540669 HBBP68871 147 aa7.43□□□□□ -1.22
VPS33A-204ENST00000540669 SAMD10Q9BYL1 202 aa7.43□□□□□ -1.22
VPS33A-204ENST00000540669 SMCO4Q9NRQ5 59 aa7.43□□□□□ -1.22
VPS33A-204ENST00000540669 ALMS1Q8TCU4 4167 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 MUC21A0A0G2JKD1 596 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 MUC21A0A140T8X8 626 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 GAGE12BA1L429 117 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 RHODO00212 210 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 GAGE7O76087 117 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 TRGC1P0CF51 173 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 GAGE12FP0CL80 117 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 GAGE12GP0CL81 117 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 GAGE12IP0CL82 117 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 LINC00694P0DN24 101 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 GATA1P15976 413 aaPredicted RBP7.42□□□□□ -1.22
VPS33A-204ENST00000540669 HOXA5P20719 270 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 EVI2AP22794 236 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 EMP1P54849 157 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 FHL2Q14192 279 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 SPANXN1Q5VSR9 72 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 TMEM88Q6PEY1 159 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 KCNIP4Q6PIL6 250 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 Q6ZTC4 211 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 FRZBQ92765 325 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 RNF185Q96GF1 192 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 ZNF479Q96JC4 524 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 TPPP3Q9BW30 176 aa7.42□□□□□ -1.22
VPS33A-204ENST00000540669 DNAH6Q9C0G6 4158 aa7.41□□□□□ -1.22
VPS33A-204ENST00000540669 NUPR2A6NF83 97 aa7.41□□□□□ -1.22
VPS33A-204ENST00000540669 SCO1O75880 301 aa7.41□□□□□ -1.22
VPS33A-204ENST00000540669 IGHV3-53P01767 116 aa7.41□□□□□ -1.22
VPS33A-204ENST00000540669 DAD1P61803 113 aa7.41□□□□□ -1.22
VPS33A-204ENST00000540669 RIGQ13278 110 aa7.41□□□□□ -1.22
VPS33A-204ENST00000540669 MRPL54Q6P161 138 aaKnown RBP7.41□□□□□ -1.22
VPS33A-204ENST00000540669 TMEM136Q6ZRR5 245 aa7.41□□□□□ -1.22
VPS33A-204ENST00000540669 KLK5Q9Y337 293 aaPredicted RBP7.41□□□□□ -1.22
VPS33A-204ENST00000540669 URGCP-MRPS24S4R325 110 aa7.41□□□□□ -1.22
VPS33A-204ENST00000540669 LYSTQ99698 3801 aa7.41□□□□□ -1.22
VPS33A-204ENST00000540669 TGIF2-C20orf24A0A0A6YYL0 155 aa7.4□□□□□ -1.22
VPS33A-204ENST00000540669 COLCA2A8K830 154 aa7.4□□□□□ -1.22
VPS33A-204ENST00000540669 ATP5G1P05496 136 aa7.4□□□□□ -1.22
VPS33A-204ENST00000540669 DEFB130BP0DP73 79 aa7.4□□□□□ -1.22
VPS33A-204ENST00000540669 DEFB130AP0DP74 79 aa7.4□□□□□ -1.22
VPS33A-204ENST00000540669 S100PP25815 95 aa7.4□□□□□ -1.22
VPS33A-204ENST00000540669 NANOS2P60321 138 aaKnown RBP7.4□□□□□ -1.22
VPS33A-204ENST00000540669 FAM104BQ5XKR9 115 aa7.4□□□□□ -1.22
VPS33A-204ENST00000540669 Q6ZSN1 163 aa7.4□□□□□ -1.22
VPS33A-204ENST00000540669 C11orf45Q8TAV5 145 aa7.4□□□□□ -1.22
VPS33A-204ENST00000540669 DPH3P1Q9H4G8 78 aa7.4□□□□□ -1.22
VPS33A-204ENST00000540669 TRBV6-4A0A1B0GX49 114 aa7.39□□□□□ -1.23
VPS33A-204ENST00000540669 H3BNG1 76 aa7.39□□□□□ -1.23
VPS33A-204ENST00000540669 PHOX2AO14813 284 aa7.39□□□□□ -1.23
VPS33A-204ENST00000540669 S100A8P05109 93 aa7.39□□□□□ -1.23
VPS33A-204ENST00000540669 TWIST1Q15672 202 aa7.39□□□□□ -1.23
VPS33A-204ENST00000540669 CASC10Q5T4H9 136 aa7.39□□□□□ -1.23
VPS33A-204ENST00000540669 ZFAND6Q6FIF0 208 aa7.39□□□□□ -1.23
VPS33A-204ENST00000540669 C14orf178Q8N769 122 aaPredicted RBP7.39□□□□□ -1.23
VPS33A-204ENST00000540669 BORCS7Q96B45 105 aa7.39□□□□□ -1.23
VPS33A-204ENST00000540669 GNB1LQ9BYB4 327 aa7.39□□□□□ -1.23
VPS33A-204ENST00000540669 TRGV2A0A075B6R0 118 aa7.38□□□□□ -1.23
VPS33A-204ENST00000540669 A0A087WWL8 130 aa7.38□□□□□ -1.23
VPS33A-204ENST00000540669 M0QY20 66 aa7.38□□□□□ -1.23
VPS33A-204ENST00000540669 MT-ND6P03923 174 aa7.38□□□□□ -1.23
VPS33A-204ENST00000540669 RAB4AP20338 218 aa7.38□□□□□ -1.23
VPS33A-204ENST00000540669 CRYBA4P53673 196 aa7.38□□□□□ -1.23
VPS33A-204ENST00000540669 RAB4BP61018 213 aa7.38□□□□□ -1.23
VPS33A-204ENST00000540669 SLAQ13239 276 aa7.38□□□□□ -1.23
VPS33A-204ENST00000540669 COX19Q49B96 90 aa7.38□□□□□ -1.23
VPS33A-204ENST00000540669 OR4C5Q8NGB2 326 aa7.38□□□□□ -1.23
VPS33A-204ENST00000540669 VSIG2Q96IQ7 327 aa7.38□□□□□ -1.23
VPS33A-204ENST00000540669 TRAV10A0A0B4J240 114 aa7.37□□□□□ -1.23
VPS33A-204ENST00000540669 TMEM238LA0A1B0GVL6 79 aa7.37□□□□□ -1.23
VPS33A-204ENST00000540669 HLA-DQA1P01909 254 aa7.37□□□□□ -1.23
VPS33A-204ENST00000540669 CAMPP49913 170 aa7.37□□□□□ -1.23
VPS33A-204ENST00000540669 SUMO4Q6EEV6 95 aa7.37□□□□□ -1.23
VPS33A-204ENST00000540669 AMN1Q8IY45 258 aa7.37□□□□□ -1.23
VPS33A-204ENST00000540669 SLC25A29Q8N8R3 303 aa7.37□□□□□ -1.23
VPS33A-204ENST00000540669 NRACQ8N912 160 aa7.37□□□□□ -1.23
VPS33A-204ENST00000540669 FAM210BQ96KR6 192 aa7.37□□□□□ -1.23
VPS33A-204ENST00000540669 SACSQ9NZJ4 4579 aa7.37□□□□□ -1.23
VPS33A-204ENST00000540669 TRBV10-1A0A0K0K1A3 114 aa7.36□□□□□ -1.23
VPS33A-204ENST00000540669 TRBV6-5A0A0K0K1A5 114 aa7.36□□□□□ -1.23
VPS33A-204ENST00000540669 K7EQD1 137 aa7.36□□□□□ -1.23
VPS33A-204ENST00000540669 GAS8-AS1O95177 125 aa7.36□□□□□ -1.23
VPS33A-204ENST00000540669 MRPL51Q4U2R6 128 aaKnown RBP7.36□□□□□ -1.23
VPS33A-204ENST00000540669 MRAP2Q96G30 205 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms