RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 LINC00694P0DN24 101 aa10.23□□□□□ -0.77
UBE3B-212ENST00000540230 MED14OSP0DP75 135 aa10.23□□□□□ -0.77
UBE3B-212ENST00000540230 GAGE1Q13065 139 aa10.23□□□□□ -0.77
UBE3B-212ENST00000540230 GAGE4Q13068 117 aa10.23□□□□□ -0.77
UBE3B-212ENST00000540230 GAGE5Q13069 117 aa10.23□□□□□ -0.77
UBE3B-212ENST00000540230 GAGE13Q4V321 117 aa10.23□□□□□ -0.77
UBE3B-212ENST00000540230 ZFP82Q8N141 532 aa10.23□□□□□ -0.77
UBE3B-212ENST00000540230 C19orf71A6NCJ1 209 aa10.23□□□□□ -0.77
UBE3B-212ENST00000540230 SNAI2O43623 268 aa10.23□□□□□ -0.77
UBE3B-212ENST00000540230 GZMBP10144 247 aa10.23□□□□□ -0.77
UBE3B-212ENST00000540230 GNG4P50150 75 aa10.23□□□□□ -0.77
UBE3B-212ENST00000540230 Q6ZRN7 208 aaPredicted RBP10.23□□□□□ -0.77
UBE3B-212ENST00000540230 SH2D6Q7Z4S9 175 aa10.23□□□□□ -0.77
UBE3B-212ENST00000540230 LYPD6BQ8NI32 183 aa10.23□□□□□ -0.77
UBE3B-212ENST00000540230 SSBP4Q9BWG4 385 aaPredicted RBP10.23□□□□□ -0.77
UBE3B-212ENST00000540230 LY96Q9Y6Y9 160 aa10.23□□□□□ -0.77
UBE3B-212ENST00000540230 RHODO00212 210 aa10.22□□□□□ -0.77
UBE3B-212ENST00000540230 DNAH10OSP0CZ25 163 aa10.22□□□□□ -0.77
UBE3B-212ENST00000540230 TIRAPP58753 221 aa10.22□□□□□ -0.77
UBE3B-212ENST00000540230 SSTP61278 116 aa10.21□□□□□ -0.78
UBE3B-212ENST00000540230 BLOC1S1P78537 153 aa10.21□□□□□ -0.78
UBE3B-212ENST00000540230 ATP6V0E2Q8NHE4 81 aa10.21□□□□□ -0.78
UBE3B-212ENST00000540230 OR5AL1P0C617 328 aa10.2□□□□□ -0.78
UBE3B-212ENST00000540230 OR2D3Q8NGH3 330 aa10.2□□□□□ -0.78
UBE3B-212ENST00000540230 SMIM12Q96EX1 92 aa10.2□□□□□ -0.78
UBE3B-212ENST00000540230 GTSF1LQ9H1H1 148 aa10.2□□□□□ -0.78
UBE3B-212ENST00000540230 RBFOX3A6NFN3 312 aa10.19□□□□□ -0.78
UBE3B-212ENST00000540230 TAGLN2P37802 199 aaKnown RBP10.19□□□□□ -0.78
UBE3B-212ENST00000540230 IGHV3-38A0A0C4DH36 116 aa10.18□□□□□ -0.78
UBE3B-212ENST00000540230 K7EN84 100 aa10.18□□□□□ -0.78
UBE3B-212ENST00000540230 IGLC6P0CF74 106 aa10.18□□□□□ -0.78
UBE3B-212ENST00000540230 BTF3P20290 206 aaKnown RBP10.18□□□□□ -0.78
UBE3B-212ENST00000540230 OR10J3Q5JRS4 329 aa10.18□□□□□ -0.78
UBE3B-212ENST00000540230 LELP1Q5T871 98 aa10.18□□□□□ -0.78
UBE3B-212ENST00000540230 SPANXN1Q5VSR9 72 aa10.18□□□□□ -0.78
UBE3B-212ENST00000540230 Q8N3U1 123 aa10.18□□□□□ -0.78
UBE3B-212ENST00000540230 DAZAP1Q96EP5 407 aaKnown RBP10.18□□□□□ -0.78
UBE3B-212ENST00000540230 RYR1P21817 5038 aa10.18□□□□□ -0.78
UBE3B-212ENST00000540230 EVI2AP22794 236 aa10.17□□□□□ -0.78
UBE3B-212ENST00000540230 TOR2AQ5JU69 321 aa10.17□□□□□ -0.78
UBE3B-212ENST00000540230 APOBP04114 4563 aaKnown RBP10.17□□□□□ -0.78
UBE3B-212ENST00000540230 HSPG2P98160 4391 aa10.17□□□□□ -0.78
UBE3B-212ENST00000540230 P01737 135 aa10.17□□□□□ -0.78
UBE3B-212ENST00000540230 LINC01556Q5JQF7 62 aa10.17□□□□□ -0.78
UBE3B-212ENST00000540230 FER1L6-AS1Q8NA97 138 aa10.17□□□□□ -0.78
UBE3B-212ENST00000540230 OCC1Q8TAD7 63 aa10.17□□□□□ -0.78
UBE3B-212ENST00000540230 TPPP3Q9BW30 176 aa10.17□□□□□ -0.78
UBE3B-212ENST00000540230 TRAV9-2A0A087WT02 112 aa10.16□□□□□ -0.78
UBE3B-212ENST00000540230 TRAV8-6A0A0B4J262 113 aa10.16□□□□□ -0.78
UBE3B-212ENST00000540230 IGHV3-30P01768 117 aa10.16□□□□□ -0.78
UBE3B-212ENST00000540230 IGHV3-33P01772 117 aa10.16□□□□□ -0.78
UBE3B-212ENST00000540230 IGHV3-30-3P0DP02 117 aa10.16□□□□□ -0.78
UBE3B-212ENST00000540230 IGHV3-30-5P0DP03 117 aa10.16□□□□□ -0.78
UBE3B-212ENST00000540230 ZNF56Q15929 161 aa10.16□□□□□ -0.78
UBE3B-212ENST00000540230 NUDT10Q8NFP7 164 aa10.16□□□□□ -0.78
UBE3B-212ENST00000540230 NUDT11Q96G61 164 aa10.16□□□□□ -0.78
UBE3B-212ENST00000540230 RNASE7Q9H1E1 156 aaKnown RBP10.16□□□□□ -0.78
UBE3B-212ENST00000540230 MSRB1Q9NZV6 116 aa10.16□□□□□ -0.78
UBE3B-212ENST00000540230 KIF25-AS1Q9Y6Z4 181 aa10.16□□□□□ -0.78
UBE3B-212ENST00000540230 TMEM250H0YL14 139 aa10.15□□□□□ -0.78
UBE3B-212ENST00000540230 KRTAP10-2P60368 255 aa10.15□□□□□ -0.78
UBE3B-212ENST00000540230 SPATA12Q7Z6I5 190 aa10.15□□□□□ -0.78
UBE3B-212ENST00000540230 CEBPGP53567 150 aa10.14□□□□□ -0.79
UBE3B-212ENST00000540230 RPS20P60866 119 aaKnown RBP10.14□□□□□ -0.79
UBE3B-212ENST00000540230 RAB4BP61018 213 aa10.14□□□□□ -0.79
UBE3B-212ENST00000540230 NEXN-AS1Q8NBZ9 246 aa10.14□□□□□ -0.79
UBE3B-212ENST00000540230 FAM210AQ96ND0 272 aa10.14□□□□□ -0.79
UBE3B-212ENST00000540230 TRBV10-1A0A0K0K1A3 114 aa10.13□□□□□ -0.79
UBE3B-212ENST00000540230 K7EP13 123 aa10.13□□□□□ -0.79
UBE3B-212ENST00000540230 UBE2D3P61077 147 aa10.13□□□□□ -0.79
UBE3B-212ENST00000540230 UBE2D2P62837 147 aa10.13□□□□□ -0.79
UBE3B-212ENST00000540230 AP1S3Q96PC3 154 aa10.13□□□□□ -0.79
UBE3B-212ENST00000540230 EIF5A2Q9GZV4 153 aaKnown RBP10.13□□□□□ -0.79
UBE3B-212ENST00000540230 C16orf90A8MZG2 172 aa10.12□□□□□ -0.79
UBE3B-212ENST00000540230 FUSP35637 526 aaKnown RBP eCLIP10.12□□□□□ -0.79
UBE3B-212ENST00000540230 RPL36AP83881 106 aaKnown RBP10.12□□□□□ -0.79
UBE3B-212ENST00000540230 LYZL1Q6UWQ5 148 aa10.12□□□□□ -0.79
UBE3B-212ENST00000540230 C10orf126Q8N4M7 172 aa10.12□□□□□ -0.79
UBE3B-212ENST00000540230 RPL36ALQ969Q0 106 aaKnown RBP10.12□□□□□ -0.79
UBE3B-212ENST00000540230 BIN3Q9NQY0 253 aa10.12□□□□□ -0.79
UBE3B-212ENST00000540230 TRBV7-3A0A075B6L6 115 aa10.12□□□□□ -0.79
UBE3B-212ENST00000540230 IBA57-AS1B1ANH7 110 aa10.12□□□□□ -0.79
UBE3B-212ENST00000540230 NFE4Q86UQ8 179 aa10.12□□□□□ -0.79
UBE3B-212ENST00000540230 OR10G8Q8NGN5 311 aa10.12□□□□□ -0.79
UBE3B-212ENST00000540230 RPP21Q9H633 154 aaKnown RBP10.12□□□□□ -0.79
UBE3B-212ENST00000540230 XKRY2A2RUG3 117 aa10.11□□□□□ -0.79
UBE3B-212ENST00000540230 F5H697 171 aa10.11□□□□□ -0.79
UBE3B-212ENST00000540230 SRP19P09132 144 aaKnown RBP10.11□□□□□ -0.79
UBE3B-212ENST00000540230 CTRLP40313 264 aa10.11□□□□□ -0.79
UBE3B-212ENST00000540230 Q9HAA7 133 aa10.11□□□□□ -0.79
UBE3B-212ENST00000540230 MGPP08493 103 aa10.1□□□□□ -0.79
UBE3B-212ENST00000540230 SMIM17P0DL12 118 aa10.1□□□□□ -0.79
UBE3B-212ENST00000540230 CACNG7P62955 275 aa10.1□□□□□ -0.79
UBE3B-212ENST00000540230 TEX261Q6UWH6 196 aa10.1□□□□□ -0.79
UBE3B-212ENST00000540230 DAZ4Q86SG3 579 aaKnown RBP10.1□□□□□ -0.79
UBE3B-212ENST00000540230 GTSF1Q8WW33 167 aa10.1□□□□□ -0.79
UBE3B-212ENST00000540230 DAZ3Q9NR90 486 aaKnown RBP10.1□□□□□ -0.79
UBE3B-212ENST00000540230 A0A087WTM6 91 aa10.09□□□□□ -0.79
UBE3B-212ENST00000540230 A0A087WWC5 75 aa10.09□□□□□ -0.79
UBE3B-212ENST00000540230 F2Z2F3 143 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms