RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 M0R2P5 195 aa7.75□□□□□ -1.17
YBX3-207ENST00000539204 CXorf1O96002 111 aa7.75□□□□□ -1.17
YBX3-207ENST00000539204 ODF1Q14990 250 aa7.75□□□□□ -1.17
YBX3-207ENST00000539204 FAM159AQ6UWV7 190 aa7.75□□□□□ -1.17
YBX3-207ENST00000539204 LINC01600Q96MT4 127 aa7.75□□□□□ -1.17
YBX3-207ENST00000539204 ARL2-SNX15V9GYD0 113 aa7.75□□□□□ -1.17
YBX3-207ENST00000539204 LPAP08519 4548 aa7.74□□□□□ -1.17
YBX3-207ENST00000539204 MUC2Q02817 5179 aa7.74□□□□□ -1.17
YBX3-207ENST00000539204 TRBV6-4A0A1B0GX49 114 aa7.74□□□□□ -1.17
YBX3-207ENST00000539204 FBLL1A6NHQ2 334 aaKnown RBP7.74□□□□□ -1.17
YBX3-207ENST00000539204 MEF2BQ02080 365 aaPredicted RBP7.74□□□□□ -1.17
YBX3-207ENST00000539204 RHOHQ15669 191 aa7.74□□□□□ -1.17
YBX3-207ENST00000539204 FAM74A3Q4VXF1 159 aa7.74□□□□□ -1.17
YBX3-207ENST00000539204 C14orf177Q52M58 125 aa7.74□□□□□ -1.17
YBX3-207ENST00000539204 GCSAMLQ5JQS6 135 aa7.74□□□□□ -1.17
YBX3-207ENST00000539204 EXOC3-AS1Q8N2X6 119 aa7.74□□□□□ -1.17
YBX3-207ENST00000539204 AAMDCQ9H7C9 122 aa7.74□□□□□ -1.17
YBX3-207ENST00000539204 IGKV2-40A0A087WW87 121 aaPredicted RBP7.73□□□□□ -1.17
YBX3-207ENST00000539204 TRBV7-9A0A0J9YWB2 115 aa7.73□□□□□ -1.17
YBX3-207ENST00000539204 NDUFB4O95168 129 aa7.73□□□□□ -1.17
YBX3-207ENST00000539204 IGKV2D-40P01614 121 aaPredicted RBP7.73□□□□□ -1.17
YBX3-207ENST00000539204 OR10J4P0C629 311 aa7.73□□□□□ -1.17
YBX3-207ENST00000539204 ZNF138P52744 262 aa7.73□□□□□ -1.17
YBX3-207ENST00000539204 RHEBQ15382 184 aa7.73□□□□□ -1.17
YBX3-207ENST00000539204 PQLC2Q6ZP29 291 aa7.73□□□□□ -1.17
YBX3-207ENST00000539204 CYB561D1Q8N8Q1 229 aa7.73□□□□□ -1.17
YBX3-207ENST00000539204 OR1L4Q8NGR5 311 aa7.73□□□□□ -1.17
YBX3-207ENST00000539204 PFDN5Q99471 154 aa7.73□□□□□ -1.17
YBX3-207ENST00000539204 A0A087WWC5 75 aa7.72□□□□□ -1.17
YBX3-207ENST00000539204 B4DEV8 164 aa7.72□□□□□ -1.17
YBX3-207ENST00000539204 PDE6DO43924 150 aa7.72□□□□□ -1.17
YBX3-207ENST00000539204 CIDEAO60543 219 aa7.72□□□□□ -1.17
YBX3-207ENST00000539204 ARL14EPLP0DKL9 152 aa7.72□□□□□ -1.17
YBX3-207ENST00000539204 GCHFRP30047 84 aa7.72□□□□□ -1.17
YBX3-207ENST00000539204 TAS2R45P59539 299 aa7.72□□□□□ -1.17
YBX3-207ENST00000539204 PNRC1Q12796 327 aaPredicted RBP7.72□□□□□ -1.17
YBX3-207ENST00000539204 PDE6HQ13956 83 aa7.72□□□□□ -1.17
YBX3-207ENST00000539204 TVP23CQ96ET8 276 aa7.72□□□□□ -1.17
YBX3-207ENST00000539204 URGCP-MRPS24S4R325 110 aa7.72□□□□□ -1.17
YBX3-207ENST00000539204 C7orf77A4D0Y5 90 aa7.71□□□□□ -1.18
YBX3-207ENST00000539204 FAM74A7A6NL05 159 aa7.71□□□□□ -1.18
YBX3-207ENST00000539204 F6UZH7 168 aa7.71□□□□□ -1.18
YBX3-207ENST00000539204 HMGB3O15347 200 aaKnown RBP7.71□□□□□ -1.18
YBX3-207ENST00000539204 GNRH2O43555 120 aa7.71□□□□□ -1.18
YBX3-207ENST00000539204 PAGE4O60829 102 aa7.71□□□□□ -1.18
YBX3-207ENST00000539204 DNAJC30Q96LL9 226 aa7.71□□□□□ -1.18
YBX3-207ENST00000539204 OR51M1Q9H341 326 aa7.71□□□□□ -1.18
YBX3-207ENST00000539204 SMCO4Q9NRQ5 59 aa7.71□□□□□ -1.18
YBX3-207ENST00000539204 TMEM167BQ9NRX6 74 aa7.71□□□□□ -1.18
YBX3-207ENST00000539204 TMEM14CQ9P0S9 112 aa7.71□□□□□ -1.18
YBX3-207ENST00000539204 Q6AWC8 147 aa7.7□□□□□ -1.18
YBX3-207ENST00000539204 MIR17HGQ75NE6 70 aa7.7□□□□□ -1.18
YBX3-207ENST00000539204 UBE2WQ96B02 151 aa7.7□□□□□ -1.18
YBX3-207ENST00000539204 DPH3Q96FX2 82 aa7.7□□□□□ -1.18
YBX3-207ENST00000539204 SDF2L1Q9HCN8 221 aa7.7□□□□□ -1.18
YBX3-207ENST00000539204 KLK12Q9UKR0 248 aa7.7□□□□□ -1.18
YBX3-207ENST00000539204 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.7□□□□□ -1.18
YBX3-207ENST00000539204 FAT4Q6V0I7 4981 aa7.69□□□□□ -1.18
YBX3-207ENST00000539204 IGHV3-73A0A0B4J1V6 119 aa7.69□□□□□ -1.18
YBX3-207ENST00000539204 M0R036 132 aa7.69□□□□□ -1.18
YBX3-207ENST00000539204 DGAT2L7PQ6IED9 249 aa7.69□□□□□ -1.18
YBX3-207ENST00000539204 C9orf163Q8N9P6 203 aa7.69□□□□□ -1.18
YBX3-207ENST00000539204 Q8TAT8 98 aa7.69□□□□□ -1.18
YBX3-207ENST00000539204 C11orf52Q96A22 123 aa7.69□□□□□ -1.18
YBX3-207ENST00000539204 ZC2HC1AQ96GY0 325 aa7.69□□□□□ -1.18
YBX3-207ENST00000539204 FAM167A-AS1Q96KT0 104 aa7.69□□□□□ -1.18
YBX3-207ENST00000539204 TMEM242Q9NWH2 141 aa7.69□□□□□ -1.18
YBX3-207ENST00000539204 NAT8Q9UHE5 227 aa7.69□□□□□ -1.18
YBX3-207ENST00000539204 NAGKQ9UJ70 344 aa7.69□□□□□ -1.18
YBX3-207ENST00000539204 A0A1W2PRE2 83 aa7.68□□□□□ -1.18
YBX3-207ENST00000539204 ZNF727A8MUV8 499 aa7.68□□□□□ -1.18
YBX3-207ENST00000539204 EIF3GO75821 320 aaKnown RBP eCLIP7.68□□□□□ -1.18
YBX3-207ENST00000539204 PYYP10082 97 aa7.68□□□□□ -1.18
YBX3-207ENST00000539204 ELOBQ15370 118 aa7.68□□□□□ -1.18
YBX3-207ENST00000539204 TMEM241Q24JQ0 296 aa7.68□□□□□ -1.18
YBX3-207ENST00000539204 ZNF876PQ49A33 203 aa7.68□□□□□ -1.18
YBX3-207ENST00000539204 CFAP126Q5VTH2 177 aa7.68□□□□□ -1.18
YBX3-207ENST00000539204 C15orf54Q8N8G6 183 aa7.68□□□□□ -1.18
YBX3-207ENST00000539204 SMIM7Q9BQ49 75 aa7.68□□□□□ -1.18
YBX3-207ENST00000539204 RPS10P5Q9NQ39 176 aa7.68□□□□□ -1.18
YBX3-207ENST00000539204 A0A0J9YXV3 536 aa7.67□□□□□ -1.18
YBX3-207ENST00000539204 PANO1I0J062 215 aa7.67□□□□□ -1.18
YBX3-207ENST00000539204 MGST1P10620 155 aaKnown RBP7.67□□□□□ -1.18
YBX3-207ENST00000539204 KRTAP10-8P60410 259 aa7.67□□□□□ -1.18
YBX3-207ENST00000539204 CST9LP1Q5W188 147 aa7.67□□□□□ -1.18
YBX3-207ENST00000539204 SDIM1Q6ZPB5 146 aa7.67□□□□□ -1.18
YBX3-207ENST00000539204 NIT1Q86X76 327 aa7.67□□□□□ -1.18
YBX3-207ENST00000539204 CBLN2Q8IUK8 224 aa7.67□□□□□ -1.18
YBX3-207ENST00000539204 SLC25A2Q9BXI2 301 aa7.67□□□□□ -1.18
YBX3-207ENST00000539204 CTDSP1Q9GZU7 261 aa7.67□□□□□ -1.18
YBX3-207ENST00000539204 PARLQ9H300 379 aa7.67□□□□□ -1.18
YBX3-207ENST00000539204 A0A0U1RQV1 116 aa7.66□□□□□ -1.18
YBX3-207ENST00000539204 GAGE12JA6NER3 117 aa7.66□□□□□ -1.18
YBX3-207ENST00000539204 COLCA2A8K830 154 aa7.66□□□□□ -1.18
YBX3-207ENST00000539204 CSN1S1P47710 185 aa7.66□□□□□ -1.18
YBX3-207ENST00000539204 CEBPGP53567 150 aa7.66□□□□□ -1.18
YBX3-207ENST00000539204 Q0VG73 95 aa7.66□□□□□ -1.18
YBX3-207ENST00000539204 GAGE1Q13065 139 aa7.66□□□□□ -1.18
YBX3-207ENST00000539204 GAGE4Q13068 117 aa7.66□□□□□ -1.18
YBX3-207ENST00000539204 GAGE5Q13069 117 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms