RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 PHLDA3Q9Y5J5 127 aa10.96□□□□□ -0.65
CDCA3-207ENST00000538862 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.96□□□□□ -0.66
CDCA3-207ENST00000538862 H3BUT2 72 aa10.96□□□□□ -0.66
CDCA3-207ENST00000538862 AVPP01185 164 aa10.96□□□□□ -0.66
CDCA3-207ENST00000538862 IGHV3-11P01762 117 aa10.96□□□□□ -0.66
CDCA3-207ENST00000538862 PF4V1P10720 104 aa10.96□□□□□ -0.66
CDCA3-207ENST00000538862 PLNP26678 52 aa10.96□□□□□ -0.66
CDCA3-207ENST00000538862 SUMO2P61956 95 aaKnown RBP10.96□□□□□ -0.66
CDCA3-207ENST00000538862 ANXA2RQ3ZCQ2 193 aa10.96□□□□□ -0.66
CDCA3-207ENST00000538862 RHPN1-AS1Q9BWJ2 59 aa10.96□□□□□ -0.66
CDCA3-207ENST00000538862 TRBV25-1A0A075B6N4 114 aa10.95□□□□□ -0.66
CDCA3-207ENST00000538862 SMIM13P0DJ93 91 aa10.95□□□□□ -0.66
CDCA3-207ENST00000538862 RPL11P62913 178 aaKnown RBP10.95□□□□□ -0.66
CDCA3-207ENST00000538862 RASL10AQ92737 203 aa10.95□□□□□ -0.66
CDCA3-207ENST00000538862 SPXQ9BT56 116 aa10.95□□□□□ -0.66
CDCA3-207ENST00000538862 CHAC1Q9BUX1 264 aa10.95□□□□□ -0.66
CDCA3-207ENST00000538862 TRAV26-1A0A087WT03 109 aa10.94□□□□□ -0.66
CDCA3-207ENST00000538862 K7EP34 96 aa10.94□□□□□ -0.66
CDCA3-207ENST00000538862 PPP1R17O96001 155 aa10.94□□□□□ -0.66
CDCA3-207ENST00000538862 TOMM6Q96B49 74 aa10.94□□□□□ -0.66
CDCA3-207ENST00000538862 JMJD8Q96S16 334 aa10.94□□□□□ -0.66
CDCA3-207ENST00000538862 DAZ1Q9NQZ3 744 aaKnown RBP10.94□□□□□ -0.66
CDCA3-207ENST00000538862 ZNF580Q9UK33 172 aa10.94□□□□□ -0.66
CDCA3-207ENST00000538862 H7C1H1 209 aa10.94□□□□□ -0.66
CDCA3-207ENST00000538862 K7EMT4 169 aa10.94□□□□□ -0.66
CDCA3-207ENST00000538862 RNASE4P34096 147 aaKnown RBP10.94□□□□□ -0.66
CDCA3-207ENST00000538862 BLCAPP62952 87 aa10.94□□□□□ -0.66
CDCA3-207ENST00000538862 SHISA2Q6UWI4 295 aa10.94□□□□□ -0.66
CDCA3-207ENST00000538862 MDFIQ99750 246 aa10.94□□□□□ -0.66
CDCA3-207ENST00000538862 TM2D2Q9BX73 214 aa10.94□□□□□ -0.66
CDCA3-207ENST00000538862 CFHR3Q02985 330 aa10.93□□□□□ -0.66
CDCA3-207ENST00000538862 POM121L12Q8N7R1 296 aa10.93□□□□□ -0.66
CDCA3-207ENST00000538862 TTTY13Q9BZ97 58 aa10.93□□□□□ -0.66
CDCA3-207ENST00000538862 A0A1W2PPM0 123 aa10.92□□□□□ -0.66
CDCA3-207ENST00000538862 F8VRH5 84 aa10.92□□□□□ -0.66
CDCA3-207ENST00000538862 GCSHP23434 173 aa10.92□□□□□ -0.66
CDCA3-207ENST00000538862 TAL2Q16559 108 aa10.92□□□□□ -0.66
CDCA3-207ENST00000538862 TM4SF20Q53R12 229 aa10.92□□□□□ -0.66
CDCA3-207ENST00000538862 C14orf178Q8N769 122 aaPredicted RBP10.92□□□□□ -0.66
CDCA3-207ENST00000538862 FAM110AQ9BQ89 295 aa10.92□□□□□ -0.66
CDCA3-207ENST00000538862 DNHD1Q96M86 4753 aa10.92□□□□□ -0.66
CDCA3-207ENST00000538862 NXPH4O95158 308 aa10.92□□□□□ -0.66
CDCA3-207ENST00000538862 RNASE3P12724 160 aaKnown RBP10.92□□□□□ -0.66
CDCA3-207ENST00000538862 FXYD2P54710 66 aa10.92□□□□□ -0.66
CDCA3-207ENST00000538862 DEFB1P60022 68 aa10.92□□□□□ -0.66
CDCA3-207ENST00000538862 OR5A1Q8NGJ0 315 aa10.92□□□□□ -0.66
CDCA3-207ENST00000538862 RAB37Q96AX2 223 aa10.92□□□□□ -0.66
CDCA3-207ENST00000538862 SCGB3A1Q96QR1 104 aa10.92□□□□□ -0.66
CDCA3-207ENST00000538862 KLLNB2CW77 178 aa10.91□□□□□ -0.66
CDCA3-207ENST00000538862 F6UB75 175 aa10.91□□□□□ -0.66
CDCA3-207ENST00000538862 GNRH2O43555 120 aa10.91□□□□□ -0.66
CDCA3-207ENST00000538862 ID1P41134 155 aa10.91□□□□□ -0.66
CDCA3-207ENST00000538862 Q6ZS46 218 aa10.91□□□□□ -0.66
CDCA3-207ENST00000538862 CEND1Q8N111 149 aa10.91□□□□□ -0.66
CDCA3-207ENST00000538862 NEXN-AS1Q8NBZ9 246 aa10.91□□□□□ -0.66
CDCA3-207ENST00000538862 FABP2P12104 132 aa10.9□□□□□ -0.66
CDCA3-207ENST00000538862 CKS1BP61024 79 aa10.9□□□□□ -0.66
CDCA3-207ENST00000538862 RPL39LQ96EH5 51 aaKnown RBP10.9□□□□□ -0.66
CDCA3-207ENST00000538862 RPL32P62910 135 aaKnown RBP10.9□□□□□ -0.67
CDCA3-207ENST00000538862 SAMD5Q5TGI4 173 aa10.9□□□□□ -0.67
CDCA3-207ENST00000538862 SIGMAR1Q99720 223 aa10.9□□□□□ -0.67
CDCA3-207ENST00000538862 MGPP08493 103 aa10.89□□□□□ -0.67
CDCA3-207ENST00000538862 LCNL1Q6ZST4 164 aa10.89□□□□□ -0.67
CDCA3-207ENST00000538862 MAPKAPK5-AS1Q8N8E1 139 aa10.89□□□□□ -0.67
CDCA3-207ENST00000538862 NAA38Q9BRA0 125 aaKnown RBP10.89□□□□□ -0.67
CDCA3-207ENST00000538862 SPCS1Q9Y6A9 102 aa10.89□□□□□ -0.67
CDCA3-207ENST00000538862 IGKV3-7A0A075B6H7 116 aa10.88□□□□□ -0.67
CDCA3-207ENST00000538862 IGHV4OR15-8A0A075B7B6 117 aa10.88□□□□□ -0.67
CDCA3-207ENST00000538862 A0A087WW49 117 aa10.88□□□□□ -0.67
CDCA3-207ENST00000538862 OR11H12B2RN74 326 aa10.88□□□□□ -0.67
CDCA3-207ENST00000538862 LINC01619G3V211 115 aa10.88□□□□□ -0.67
CDCA3-207ENST00000538862 SPRY2O43597 315 aa10.88□□□□□ -0.67
CDCA3-207ENST00000538862 TSPAN13O95857 204 aa10.88□□□□□ -0.67
CDCA3-207ENST00000538862 GATA3P23771 443 aa10.88□□□□□ -0.67
CDCA3-207ENST00000538862 C2orf66Q6UXQ4 117 aa10.88□□□□□ -0.67
CDCA3-207ENST00000538862 OR11H1Q8NG94 326 aa10.88□□□□□ -0.67
CDCA3-207ENST00000538862 OR11H2Q8NH07 326 aa10.88□□□□□ -0.67
CDCA3-207ENST00000538862 PHLDA1Q8WV24 401 aaPredicted RBP10.88□□□□□ -0.67
CDCA3-207ENST00000538862 KIF25-AS1Q9Y6Z4 181 aa10.88□□□□□ -0.67
CDCA3-207ENST00000538862 LINC01549A6NIU2 74 aa10.88□□□□□ -0.67
CDCA3-207ENST00000538862 J3QLI3 93 aa10.88□□□□□ -0.67
CDCA3-207ENST00000538862 FAM159AQ6UWV7 190 aa10.88□□□□□ -0.67
CDCA3-207ENST00000538862 DCANP1Q8TF63 244 aa10.88□□□□□ -0.67
CDCA3-207ENST00000538862 STAB1Q9NY15 2570 aa10.87□□□□□ -0.67
CDCA3-207ENST00000538862 PSMB8P28062 276 aa10.87□□□□□ -0.67
CDCA3-207ENST00000538862 LINC00315P59091 139 aa10.87□□□□□ -0.67
CDCA3-207ENST00000538862 TMEM89A2RUT3 159 aa10.86□□□□□ -0.67
CDCA3-207ENST00000538862 SAP30O75446 220 aa10.86□□□□□ -0.67
CDCA3-207ENST00000538862 AZU1P20160 251 aa10.86□□□□□ -0.67
CDCA3-207ENST00000538862 BAALCQ8WXS3 180 aa10.86□□□□□ -0.67
CDCA3-207ENST00000538862 ODF3Q96PU9 254 aa10.86□□□□□ -0.67
CDCA3-207ENST00000538862 MUC4Q99102 2169 aa10.86□□□□□ -0.67
CDCA3-207ENST00000538862 MYMXA0A1B0GTQ4 84 aa10.85□□□□□ -0.67
CDCA3-207ENST00000538862 KRTAP24-1Q3LI83 254 aa10.85□□□□□ -0.67
CDCA3-207ENST00000538862 NEGR1Q7Z3B1 354 aa10.85□□□□□ -0.67
CDCA3-207ENST00000538862 NHP2Q9NX24 153 aaKnown RBP10.85□□□□□ -0.67
CDCA3-207ENST00000538862 PRSS29PA6NIE9 313 aa10.84□□□□□ -0.67
CDCA3-207ENST00000538862 FSHBP01225 129 aa10.84□□□□□ -0.67
CDCA3-207ENST00000538862 CYSLTR1Q9Y271 337 aa10.84□□□□□ -0.67
CDCA3-207ENST00000538862 TNFRSF18Q9Y5U5 241 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms