RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 GAGE13Q4V321 117 aa10.08□□□□□ -0.8
RAB40B-202ENST00000538809 LINC01556Q5JQF7 62 aa10.08□□□□□ -0.8
RAB40B-202ENST00000538809 ATP6V0E2Q8NHE4 81 aa10.08□□□□□ -0.8
RAB40B-202ENST00000538809 MANBALQ9NQG1 85 aa10.08□□□□□ -0.8
RAB40B-202ENST00000538809 CXCL1P09341 107 aa10.07□□□□□ -0.8
RAB40B-202ENST00000538809 LELP1Q5T871 98 aa10.07□□□□□ -0.8
RAB40B-202ENST00000538809 EIF5AL1Q6IS14 154 aaKnown RBP10.07□□□□□ -0.8
RAB40B-202ENST00000538809 SLC51BQ86UW2 128 aa10.07□□□□□ -0.8
RAB40B-202ENST00000538809 BAGE2Q86Y30 109 aa10.07□□□□□ -0.8
RAB40B-202ENST00000538809 C14orf178Q8N769 122 aaPredicted RBP10.07□□□□□ -0.8
RAB40B-202ENST00000538809 GTSF1LQ9H1H1 148 aa10.07□□□□□ -0.8
RAB40B-202ENST00000538809 Q9HAA7 133 aa10.07□□□□□ -0.8
RAB40B-202ENST00000538809 Q9UF83 564 aa10.07□□□□□ -0.8
RAB40B-202ENST00000538809 RPL19P84098 196 aaKnown RBP10.06□□□□□ -0.8
RAB40B-202ENST00000538809 FAM74A4Q5TZK3 123 aa10.06□□□□□ -0.8
RAB40B-202ENST00000538809 Q8N3U1 123 aa10.06□□□□□ -0.8
RAB40B-202ENST00000538809 SYT8Q8NBV8 401 aa10.06□□□□□ -0.8
RAB40B-202ENST00000538809 SFRP2Q96HF1 295 aa10.06□□□□□ -0.8
RAB40B-202ENST00000538809 DERL1Q9BUN8 251 aa10.06□□□□□ -0.8
RAB40B-202ENST00000538809 GNG13Q9P2W3 67 aa10.06□□□□□ -0.8
RAB40B-202ENST00000538809 A0A087WWL8 130 aa10.05□□□□□ -0.8
RAB40B-202ENST00000538809 M0R381 172 aa10.05□□□□□ -0.8
RAB40B-202ENST00000538809 RHODO00212 210 aa10.05□□□□□ -0.8
RAB40B-202ENST00000538809 RPL35P42766 123 aaKnown RBP10.05□□□□□ -0.8
RAB40B-202ENST00000538809 C9orf62Q8N4C0 152 aa10.05□□□□□ -0.8
RAB40B-202ENST00000538809 PGPEP1Q9NXJ5 209 aa10.05□□□□□ -0.8
RAB40B-202ENST00000538809 PHLDA3Q9Y5J5 127 aa10.05□□□□□ -0.8
RAB40B-202ENST00000538809 IBA57-AS1B1ANH7 110 aa10.04□□□□□ -0.8
RAB40B-202ENST00000538809 SNAI2O43623 268 aa10.04□□□□□ -0.8
RAB40B-202ENST00000538809 PSCAO43653 123 aa10.04□□□□□ -0.8
RAB40B-202ENST00000538809 IGLV2-8P01709 118 aa10.04□□□□□ -0.8
RAB40B-202ENST00000538809 CDPF1Q6NVV7 123 aa10.04□□□□□ -0.8
RAB40B-202ENST00000538809 AKAP14Q86UN6 197 aa10.04□□□□□ -0.8
RAB40B-202ENST00000538809 ZFP82Q8N141 532 aa10.04□□□□□ -0.8
RAB40B-202ENST00000538809 Q8N1X5 172 aa10.04□□□□□ -0.8
RAB40B-202ENST00000538809 SSBP4Q9BWG4 385 aaPredicted RBP10.04□□□□□ -0.8
RAB40B-202ENST00000538809 TEX46H3BTG2 121 aa10.02□□□□□ -0.81
RAB40B-202ENST00000538809 MEF2BQ02080 365 aaPredicted RBP10.02□□□□□ -0.81
RAB40B-202ENST00000538809 OR10AG1Q8NH19 301 aa10.02□□□□□ -0.81
RAB40B-202ENST00000538809 BOLA1Q9Y3E2 137 aa10.02□□□□□ -0.81
RAB40B-202ENST00000538809 hCG_2014768A0A024R1R8 64 aa10.01□□□□□ -0.81
RAB40B-202ENST00000538809 LRCOL1A6NCL2 159 aa10.01□□□□□ -0.81
RAB40B-202ENST00000538809 OR5AL1P0C617 328 aa10.01□□□□□ -0.81
RAB40B-202ENST00000538809 BCL2P10415 239 aa10.01□□□□□ -0.81
RAB40B-202ENST00000538809 KRTAP10-1P60331 282 aa10.01□□□□□ -0.81
RAB40B-202ENST00000538809 CENPWQ5EE01 88 aa10.01□□□□□ -0.81
RAB40B-202ENST00000538809 PRR27Q6MZM9 219 aa10.01□□□□□ -0.81
RAB40B-202ENST00000538809 TRBV20OR9-2A0A075B6H5 130 aa10□□□□□ -0.81
RAB40B-202ENST00000538809 C19orf71A6NCJ1 209 aa10□□□□□ -0.81
RAB40B-202ENST00000538809 SMIM12Q96EX1 92 aa10□□□□□ -0.81
RAB40B-202ENST00000538809 MUC21A0A0G2JKD1 596 aa9.99□□□□□ -0.81
RAB40B-202ENST00000538809 MUC21A0A140T8X8 626 aa9.99□□□□□ -0.81
RAB40B-202ENST00000538809 RAB19A4D1S5 217 aa9.99□□□□□ -0.81
RAB40B-202ENST00000538809 PDE6DO43924 150 aa9.99□□□□□ -0.81
RAB40B-202ENST00000538809 IFNA1P01562 189 aa9.99□□□□□ -0.81
RAB40B-202ENST00000538809 DAZ4Q86SG3 579 aaKnown RBP9.99□□□□□ -0.81
RAB40B-202ENST00000538809 DAZ3Q9NR90 486 aaKnown RBP9.99□□□□□ -0.81
RAB40B-202ENST00000538809 TRBV10-1A0A0K0K1A3 114 aa9.98□□□□□ -0.81
RAB40B-202ENST00000538809 LAGE3Q14657 143 aa9.98□□□□□ -0.81
RAB40B-202ENST00000538809 OR10G8Q8NGN5 311 aa9.98□□□□□ -0.81
RAB40B-202ENST00000538809 IGLV5-52A0A0A0MRZ9 124 aa9.97□□□□□ -0.81
RAB40B-202ENST00000538809 IGLC6P0CF74 106 aa9.97□□□□□ -0.81
RAB40B-202ENST00000538809 GCSHP23434 173 aa9.97□□□□□ -0.81
RAB40B-202ENST00000538809 XGP55808 180 aa9.97□□□□□ -0.81
RAB40B-202ENST00000538809 WFDC2Q14508 124 aa9.97□□□□□ -0.81
RAB40B-202ENST00000538809 ZNF56Q15929 161 aa9.97□□□□□ -0.81
RAB40B-202ENST00000538809 MED9Q9NWA0 146 aa9.97□□□□□ -0.81
RAB40B-202ENST00000538809 VAX2Q9UIW0 290 aa9.97□□□□□ -0.81
RAB40B-202ENST00000538809 KIF25-AS1Q9Y6Z4 181 aa9.97□□□□□ -0.81
RAB40B-202ENST00000538809 A0A087WWC5 75 aa9.96□□□□□ -0.82
RAB40B-202ENST00000538809 TAGLN2P37802 199 aaKnown RBP9.96□□□□□ -0.82
RAB40B-202ENST00000538809 GNG4P50150 75 aa9.96□□□□□ -0.82
RAB40B-202ENST00000538809 RAB4BP61018 213 aa9.96□□□□□ -0.82
RAB40B-202ENST00000538809 UBE2D3P61077 147 aa9.96□□□□□ -0.82
RAB40B-202ENST00000538809 SSTP61278 116 aa9.96□□□□□ -0.82
RAB40B-202ENST00000538809 UBE2D2P62837 147 aa9.96□□□□□ -0.82
RAB40B-202ENST00000538809 HAMPP81172 84 aa9.96□□□□□ -0.82
RAB40B-202ENST00000538809 ALKAL2Q6UX46 152 aa9.96□□□□□ -0.82
RAB40B-202ENST00000538809 Q8N814 137 aa9.96□□□□□ -0.82
RAB40B-202ENST00000538809 LYPD6BQ8NI32 183 aa9.96□□□□□ -0.82
RAB40B-202ENST00000538809 A0A1B0GVG6 124 aa9.95□□□□□ -0.82
RAB40B-202ENST00000538809 GZMBP10144 247 aa9.95□□□□□ -0.82
RAB40B-202ENST00000538809 RPL36AP83881 106 aaKnown RBP9.95□□□□□ -0.82
RAB40B-202ENST00000538809 SPANXN1Q5VSR9 72 aa9.95□□□□□ -0.82
RAB40B-202ENST00000538809 NEXN-AS1Q8NBZ9 246 aa9.95□□□□□ -0.82
RAB40B-202ENST00000538809 RPL36ALQ969Q0 106 aaKnown RBP9.95□□□□□ -0.82
RAB40B-202ENST00000538809 DNAJC30Q96LL9 226 aa9.95□□□□□ -0.82
RAB40B-202ENST00000538809 TRBV7-3A0A075B6L6 115 aa9.94□□□□□ -0.82
RAB40B-202ENST00000538809 LECT2O14960 151 aa9.94□□□□□ -0.82
RAB40B-202ENST00000538809 RPS20P60866 119 aaKnown RBP9.94□□□□□ -0.82
RAB40B-202ENST00000538809 NIT1Q86X76 327 aa9.94□□□□□ -0.82
RAB40B-202ENST00000538809 OR2D3Q8NGH3 330 aa9.94□□□□□ -0.82
RAB40B-202ENST00000538809 NTN5Q8WTR8 489 aaPredicted RBP9.94□□□□□ -0.82
RAB40B-202ENST00000538809 TM2D2Q9BX73 214 aa9.94□□□□□ -0.82
RAB40B-202ENST00000538809 URGCP-MRPS24S4R325 110 aa9.94□□□□□ -0.82
RAB40B-202ENST00000538809 TRAV8-3A0A0A6YYJ7 113 aa9.93□□□□□ -0.82
RAB40B-202ENST00000538809 RBFOX3A6NFN3 312 aa9.93□□□□□ -0.82
RAB40B-202ENST00000538809 EPM2AB3EWF7 344 aa9.93□□□□□ -0.82
RAB40B-202ENST00000538809 BLOC1S1P78537 153 aa9.93□□□□□ -0.82
RAB40B-202ENST00000538809 FER1L6-AS1Q8NA97 138 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms