RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 PKIGQ9Y2B9 76 aa4.09□□□□□ -1.75
LRP6-203ENST00000538239 NDUFAF3Q9BU61 184 aa4.09□□□□□ -1.75
LRP6-203ENST00000538239 COL5A1P20908 1838 aaPredicted RBP4.09□□□□□ -1.76
LRP6-203ENST00000538239 C18orf65Q6ZTR6 163 aa4.09□□□□□ -1.76
LRP6-203ENST00000538239 C15orf53Q8NAA6 179 aa4.09□□□□□ -1.76
LRP6-203ENST00000538239 TM2D2Q9BX73 214 aa4.09□□□□□ -1.76
LRP6-203ENST00000538239 ARHGAP21Q5T5U3 1957 aa4.09□□□□□ -1.76
LRP6-203ENST00000538239 TRBV7-3A0A075B6L6 115 aa4.08□□□□□ -1.76
LRP6-203ENST00000538239 SLC25A29Q8N8R3 303 aa4.08□□□□□ -1.76
LRP6-203ENST00000538239 MED12LQ86YW9 2145 aa4.08□□□□□ -1.76
LRP6-203ENST00000538239 TRAV26-1A0A087WT03 109 aa4.08□□□□□ -1.76
LRP6-203ENST00000538239 C9JAW5 83 aa4.08□□□□□ -1.76
LRP6-203ENST00000538239 C1orf229Q6ZS94 237 aaPredicted RBP4.08□□□□□ -1.76
LRP6-203ENST00000538239 BOD1L2Q8IYS8 172 aa4.08□□□□□ -1.76
LRP6-203ENST00000538239 SPATA25Q9BR10 227 aa4.08□□□□□ -1.76
LRP6-203ENST00000538239 Q9H8V8 135 aa4.08□□□□□ -1.76
LRP6-203ENST00000538239 DKK2Q9UBU2 259 aa4.08□□□□□ -1.76
LRP6-203ENST00000538239 SRCAPQ6ZRS2 3230 aa4.08□□□□□ -1.76
LRP6-203ENST00000538239 A0A0J9YX75 114 aa4.08□□□□□ -1.76
LRP6-203ENST00000538239 TP53TG3Q9ULZ0 132 aa4.08□□□□□ -1.76
LRP6-203ENST00000538239 LRP4O75096 1905 aa4.08□□□□□ -1.76
LRP6-203ENST00000538239 PCNX3Q9H6A9 2034 aa4.08□□□□□ -1.76
LRP6-203ENST00000538239 ZNF702PQ9H963 129 aa4.08□□□□□ -1.76
LRP6-203ENST00000538239 J3QQQ9 107 aa4.08□□□□□ -1.76
LRP6-203ENST00000538239 DEFB114Q30KQ6 69 aa4.08□□□□□ -1.76
LRP6-203ENST00000538239 ABCA1O95477 2261 aa4.08□□□□□ -1.76
LRP6-203ENST00000538239 TRAV4A0A0B4J268 109 aa4.08□□□□□ -1.76
LRP6-203ENST00000538239 FREM1Q5H8C1 2179 aa4.08□□□□□ -1.76
LRP6-203ENST00000538239 IL15RAQ13261 267 aa4.08□□□□□ -1.76
LRP6-203ENST00000538239 DEFB131BA0A096LNP1 70 aa4.07□□□□□ -1.76
LRP6-203ENST00000538239 ETDCA0A1B0GVM5 59 aa4.07□□□□□ -1.76
LRP6-203ENST00000538239 F8VRH5 84 aa4.07□□□□□ -1.76
LRP6-203ENST00000538239 IGF1P05019 195 aa4.07□□□□□ -1.76
LRP6-203ENST00000538239 FAM222AQ5U5X8 452 aa4.07□□□□□ -1.76
LRP6-203ENST00000538239 LYPD6Q86Y78 171 aa4.07□□□□□ -1.76
LRP6-203ENST00000538239 SPANXA1Q9NS26 97 aa4.07□□□□□ -1.76
LRP6-203ENST00000538239 NCR3O14931 201 aa4.07□□□□□ -1.76
LRP6-203ENST00000538239 UBE2AP49459 152 aa4.07□□□□□ -1.76
LRP6-203ENST00000538239 LINC01006Q8NI28 216 aa4.07□□□□□ -1.76
LRP6-203ENST00000538239 FAM167A-AS1Q96KT0 104 aa4.07□□□□□ -1.76
LRP6-203ENST00000538239 TIMM17AQ99595 171 aa4.07□□□□□ -1.76
LRP6-203ENST00000538239 RBMY1FQ15415 496 aaKnown RBP4.07□□□□□ -1.76
LRP6-203ENST00000538239 PTPRQQ9UMZ3 2332 aa4.07□□□□□ -1.76
LRP6-203ENST00000538239 TRAV13-2A0A0B4J235 113 aa4.07□□□□□ -1.76
LRP6-203ENST00000538239 ZFAND6Q6FIF0 208 aa4.07□□□□□ -1.76
LRP6-203ENST00000538239 ZFP2Q6ZN57 461 aa4.07□□□□□ -1.76
LRP6-203ENST00000538239 Q6ZWC4 215 aa4.07□□□□□ -1.76
LRP6-203ENST00000538239 LGALS9O00182 355 aa4.07□□□□□ -1.76
LRP6-203ENST00000538239 RPL39P62891 51 aaKnown RBP4.06□□□□□ -1.76
LRP6-203ENST00000538239 LGALS9BQ3B8N2 356 aa4.06□□□□□ -1.76
LRP6-203ENST00000538239 LGALS9CQ6DKI2 356 aa4.06□□□□□ -1.76
LRP6-203ENST00000538239 PRO0255Q9UI72 69 aa4.06□□□□□ -1.76
LRP6-203ENST00000538239 OTOGLQ3ZCN5 2332 aa4.06□□□□□ -1.76
LRP6-203ENST00000538239 Q6ZTI0 123 aa4.06□□□□□ -1.76
LRP6-203ENST00000538239 P0DMU3 169 aa4.06□□□□□ -1.76
LRP6-203ENST00000538239 FAM231AP0DMU4 169 aa4.06□□□□□ -1.76
LRP6-203ENST00000538239 FAM231CP0DMU5 169 aa4.06□□□□□ -1.76
LRP6-203ENST00000538239 IGLC2P0DOY2 106 aa4.06□□□□□ -1.76
LRP6-203ENST00000538239 FGF6P10767 208 aa4.06□□□□□ -1.76
LRP6-203ENST00000538239 COX7B2Q8TF08 81 aa4.06□□□□□ -1.76
LRP6-203ENST00000538239 LY6LH3BQJ8 138 aa4.06□□□□□ -1.76
LRP6-203ENST00000538239 M0R2N4 97 aa4.06□□□□□ -1.76
LRP6-203ENST00000538239 NDUFS5O43920 106 aa4.06□□□□□ -1.76
LRP6-203ENST00000538239 OCIAD2Q56VL3 154 aa4.06□□□□□ -1.76
LRP6-203ENST00000538239 Q6ZS46 218 aa4.06□□□□□ -1.76
LRP6-203ENST00000538239 C20orf173Q96LM9 149 aa4.06□□□□□ -1.76
LRP6-203ENST00000538239 DSCR8Q96T75 97 aa4.06□□□□□ -1.76
LRP6-203ENST00000538239 C20orf144Q9BQM9 153 aa4.06□□□□□ -1.76
LRP6-203ENST00000538239 SOCS3O14543 225 aa4.06□□□□□ -1.76
LRP6-203ENST00000538239 HIGD2BQ4VC39 106 aa4.06□□□□□ -1.76
LRP6-203ENST00000538239 NDUFA1O15239 70 aa4.06□□□□□ -1.76
LRP6-203ENST00000538239 POLR3KQ9Y2Y1 108 aaPredicted RBP4.06□□□□□ -1.76
LRP6-203ENST00000538239 ZNF664Q8N3J9 261 aa4.05□□□□□ -1.76
LRP6-203ENST00000538239 DOPEY2Q9Y3R5 2298 aa4.05□□□□□ -1.76
LRP6-203ENST00000538239 IGLV2-18A0A075B6J9 118 aa4.05□□□□□ -1.76
LRP6-203ENST00000538239 IGKV1D-37A0A075B6S9 117 aa4.05□□□□□ -1.76
LRP6-203ENST00000538239 GAGE12HA6NDE8 117 aa4.05□□□□□ -1.76
LRP6-203ENST00000538239 CRYGDP07320 174 aa4.05□□□□□ -1.76
LRP6-203ENST00000538239 NCOA6Q14686 2063 aaPredicted RBP4.05□□□□□ -1.76
LRP6-203ENST00000538239 IGKV2-24A0A0C4DH68 120 aa4.05□□□□□ -1.76
LRP6-203ENST00000538239 PSMG3-AS1Q96PY0 264 aa4.05□□□□□ -1.76
LRP6-203ENST00000538239 WFDC10AQ9H1F0 79 aa4.05□□□□□ -1.76
LRP6-203ENST00000538239 LINC00574Q9H8X3 128 aa4.05□□□□□ -1.76
LRP6-203ENST00000538239 SPTAN1Q13813 2472 aaKnown RBP4.05□□□□□ -1.76
LRP6-203ENST00000538239 LY6G6CO95867 125 aa4.05□□□□□ -1.76
LRP6-203ENST00000538239 FAM208BQ5VWN6 2430 aa4.05□□□□□ -1.76
LRP6-203ENST00000538239 OXLD1Q5BKU9 147 aa4.05□□□□□ -1.76
LRP6-203ENST00000538239 MTURNQ8N3F0 131 aa4.05□□□□□ -1.76
LRP6-203ENST00000538239 FSTL3O95633 263 aa4.05□□□□□ -1.76
LRP6-203ENST00000538239 PYY3Q5JQD4 70 aa4.05□□□□□ -1.76
LRP6-203ENST00000538239 CEND1Q8N111 149 aa4.05□□□□□ -1.76
LRP6-203ENST00000538239 GTSF1Q8WW33 167 aa4.05□□□□□ -1.76
LRP6-203ENST00000538239 CCL25O15444 150 aa4.04□□□□□ -1.76
LRP6-203ENST00000538239 HERV-K104P63124 156 aa4.04□□□□□ -1.76
LRP6-203ENST00000538239 NACAE9PAV3 2078 aa4.04□□□□□ -1.76
LRP6-203ENST00000538239 A0A0J9YXV3 536 aa4.04□□□□□ -1.76
LRP6-203ENST00000538239 TINCRA0A1B0GVN0 87 aa4.04□□□□□ -1.76
LRP6-203ENST00000538239 hADV29S1A0JD25 119 aa4.04□□□□□ -1.76
LRP6-203ENST00000538239 SPAG11BQ08648 103 aa4.04□□□□□ -1.76
LRP6-203ENST00000538239 Q6ZPA2 131 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms