RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 RNF182Q8N6D2 247 aa6.41□□□□□ -1.38
SRGAP1-202ENST00000537556 C20orf173Q96LM9 149 aa6.41□□□□□ -1.38
SRGAP1-202ENST00000537556 RNF223E7ERA6 249 aa6.41□□□□□ -1.38
SRGAP1-202ENST00000537556 VCYO14598 125 aa6.41□□□□□ -1.38
SRGAP1-202ENST00000537556 BAALC-AS2P0C853 105 aa6.41□□□□□ -1.38
SRGAP1-202ENST00000537556 IGFL4Q6B9Z1 124 aa6.41□□□□□ -1.38
SRGAP1-202ENST00000537556 DNAL4O96015 105 aa6.4□□□□□ -1.38
SRGAP1-202ENST00000537556 IGHV1-69P01742 117 aa6.4□□□□□ -1.38
SRGAP1-202ENST00000537556 IGHG2P01859 326 aa6.4□□□□□ -1.38
SRGAP1-202ENST00000537556 MRPS36P82909 103 aaKnown RBP6.4□□□□□ -1.38
SRGAP1-202ENST00000537556 VPS13AQ96RL7 3174 aa6.4□□□□□ -1.38
SRGAP1-202ENST00000537556 FRYQ5TBA9 3013 aa6.4□□□□□ -1.38
SRGAP1-202ENST00000537556 TRAV12-3A0A0B4J271 114 aa6.4□□□□□ -1.39
SRGAP1-202ENST00000537556 C16orf92Q96LL3 132 aa6.4□□□□□ -1.39
SRGAP1-202ENST00000537556 LITAFQ99732 161 aa6.4□□□□□ -1.39
SRGAP1-202ENST00000537556 TTTY12Q9BZ98 90 aa6.4□□□□□ -1.39
SRGAP1-202ENST00000537556 FAM186AA6NE01 2351 aa6.4□□□□□ -1.39
SRGAP1-202ENST00000537556 IGHV3-64A0A075B6Q5 118 aa6.39□□□□□ -1.39
SRGAP1-202ENST00000537556 M0R1W7 72 aa6.39□□□□□ -1.39
SRGAP1-202ENST00000537556 S100A4P26447 101 aaKnown RBP6.39□□□□□ -1.39
SRGAP1-202ENST00000537556 C9orf139Q6ZV77 190 aa6.39□□□□□ -1.39
SRGAP1-202ENST00000537556 PHLDA3Q9Y5J5 127 aa6.39□□□□□ -1.39
SRGAP1-202ENST00000537556 SPEGQ15772 3267 aa6.39□□□□□ -1.39
SRGAP1-202ENST00000537556 IGHV3OR16-10A0A075B7F0 116 aa6.39□□□□□ -1.39
SRGAP1-202ENST00000537556 SPRY3O43610 288 aa6.39□□□□□ -1.39
SRGAP1-202ENST00000537556 RPL39P62891 51 aaKnown RBP6.39□□□□□ -1.39
SRGAP1-202ENST00000537556 Q0VFX4 171 aa6.39□□□□□ -1.39
SRGAP1-202ENST00000537556 GPHB5Q86YW7 130 aa6.39□□□□□ -1.39
SRGAP1-202ENST00000537556 NUP37Q8NFH4 326 aa6.39□□□□□ -1.39
SRGAP1-202ENST00000537556 DSCAMO60469 2012 aa6.39□□□□□ -1.39
SRGAP1-202ENST00000537556 IGHV3-72A0A0B4J1Y9 119 aa6.39□□□□□ -1.39
SRGAP1-202ENST00000537556 IGKV3D-7A0A0C4DH55 119 aa6.39□□□□□ -1.39
SRGAP1-202ENST00000537556 KNCNA6PVL3 124 aa6.39□□□□□ -1.39
SRGAP1-202ENST00000537556 CCL3L1P16619 93 aa6.39□□□□□ -1.39
SRGAP1-202ENST00000537556 DKK4Q9UBT3 224 aa6.39□□□□□ -1.39
SRGAP1-202ENST00000537556 SMAD5-AS1Q9Y6J3 95 aa6.39□□□□□ -1.39
SRGAP1-202ENST00000537556 RBMY1BA6NDE4 496 aaKnown RBP6.38□□□□□ -1.39
SRGAP1-202ENST00000537556 RBMY1EA6NEQ0 496 aaKnown RBP6.38□□□□□ -1.39
SRGAP1-202ENST00000537556 PRAC2D3DTV9 90 aa6.38□□□□□ -1.39
SRGAP1-202ENST00000537556 RBMY1DP0C7P1 496 aaKnown RBP6.38□□□□□ -1.39
SRGAP1-202ENST00000537556 RBMY1A1P0DJD3 496 aaKnown RBP6.38□□□□□ -1.39
SRGAP1-202ENST00000537556 RBMY1CP0DJD4 496 aa6.38□□□□□ -1.39
SRGAP1-202ENST00000537556 IGHV3-30-3P0DP02 117 aa6.38□□□□□ -1.39
SRGAP1-202ENST00000537556 RBMY1FQ15415 496 aaKnown RBP6.38□□□□□ -1.39
SRGAP1-202ENST00000537556 GFRALQ6UXV0 394 aa6.38□□□□□ -1.39
SRGAP1-202ENST00000537556 Q6ZSV7 163 aa6.38□□□□□ -1.39
SRGAP1-202ENST00000537556 WFDC11Q8NEX6 87 aa6.38□□□□□ -1.39
SRGAP1-202ENST00000537556 IGHV4OR15-8A0A075B7B6 117 aa6.38□□□□□ -1.39
SRGAP1-202ENST00000537556 A0A087WW49 117 aa6.38□□□□□ -1.39
SRGAP1-202ENST00000537556 TRGV5A0A0B4J1U4 118 aa6.38□□□□□ -1.39
SRGAP1-202ENST00000537556 LINC01561Q8N1V8 128 aa6.38□□□□□ -1.39
SRGAP1-202ENST00000537556 BRK1Q8WUW1 75 aa6.38□□□□□ -1.39
SRGAP1-202ENST00000537556 PRR14LQ5THK1 2151 aa6.38□□□□□ -1.39
SRGAP1-202ENST00000537556 POLR2KP53803 58 aaKnown RBP6.37□□□□□ -1.39
SRGAP1-202ENST00000537556 ZFAND3Q9H8U3 227 aa6.37□□□□□ -1.39
SRGAP1-202ENST00000537556 WDR87Q6ZQQ6 2873 aa6.37□□□□□ -1.39
SRGAP1-202ENST00000537556 PRUNE2Q8WUY3 3088 aa6.37□□□□□ -1.39
SRGAP1-202ENST00000537556 TMEM178BH3BS89 294 aa6.37□□□□□ -1.39
SRGAP1-202ENST00000537556 FAM27E3Q08E93 113 aa6.37□□□□□ -1.39
SRGAP1-202ENST00000537556 ADAMTSL4-AS1Q5T5F5 129 aa6.37□□□□□ -1.39
SRGAP1-202ENST00000537556 Q6ZS52 159 aa6.37□□□□□ -1.39
SRGAP1-202ENST00000537556 NDUFA12Q9UI09 145 aa6.37□□□□□ -1.39
SRGAP1-202ENST00000537556 A0A087WVE0 104 aa6.36□□□□□ -1.39
SRGAP1-202ENST00000537556 IGLV1-44P01699 117 aa6.36□□□□□ -1.39
SRGAP1-202ENST00000537556 FAM223AQ8IWN6 122 aa6.36□□□□□ -1.39
SRGAP1-202ENST00000537556 VSIG2Q96IQ7 327 aa6.36□□□□□ -1.39
SRGAP1-202ENST00000537556 C16orf95Q9H693 158 aa6.36□□□□□ -1.39
SRGAP1-202ENST00000537556 SLC25A15Q9Y619 301 aa6.36□□□□□ -1.39
SRGAP1-202ENST00000537556 DNAJC13O75165 2243 aa6.36□□□□□ -1.39
SRGAP1-202ENST00000537556 A0A0U1RQV1 116 aa6.36□□□□□ -1.39
SRGAP1-202ENST00000537556 FAM223BA6NKX1 122 aa6.36□□□□□ -1.39
SRGAP1-202ENST00000537556 TIMM17BO60830 172 aa6.36□□□□□ -1.39
SRGAP1-202ENST00000537556 MED14OSP0DP75 135 aa6.36□□□□□ -1.39
SRGAP1-202ENST00000537556 WDFY3Q8IZQ1 3526 aa6.36□□□□□ -1.39
SRGAP1-202ENST00000537556 MRPL53Q96EL3 112 aaKnown RBP6.36□□□□□ -1.39
SRGAP1-202ENST00000537556 UBE2D4Q9Y2X8 147 aa6.36□□□□□ -1.39
SRGAP1-202ENST00000537556 NACAE9PAV3 2078 aa6.35□□□□□ -1.39
SRGAP1-202ENST00000537556 IGHV1-18A0A0C4DH31 117 aa6.35□□□□□ -1.39
SRGAP1-202ENST00000537556 ADARB2-AS1A8MUL3 147 aa6.35□□□□□ -1.39
SRGAP1-202ENST00000537556 GHRHP01286 108 aa6.35□□□□□ -1.39
SRGAP1-202ENST00000537556 C6orf226Q5I0X4 101 aa6.35□□□□□ -1.39
SRGAP1-202ENST00000537556 C9orf47Q6ZRZ4 202 aa6.35□□□□□ -1.39
SRGAP1-202ENST00000537556 C20orf197Q8N268 126 aa6.35□□□□□ -1.39
SRGAP1-202ENST00000537556 HES7Q9BYE0 225 aa6.35□□□□□ -1.39
SRGAP1-202ENST00000537556 LAMA1P25391 3075 aa6.35□□□□□ -1.39
SRGAP1-202ENST00000537556 SPTBN5Q9NRC6 3674 aaKnown RBP6.35□□□□□ -1.39
SRGAP1-202ENST00000537556 XCL1P47992 114 aa6.35□□□□□ -1.39
SRGAP1-202ENST00000537556 BEAN1Q3B7T3 259 aa6.35□□□□□ -1.39
SRGAP1-202ENST00000537556 FANCD2OSQ96PS1 177 aa6.35□□□□□ -1.39
SRGAP1-202ENST00000537556 RNF5Q99942 180 aa6.35□□□□□ -1.39
SRGAP1-202ENST00000537556 XCL2Q9UBD3 114 aa6.35□□□□□ -1.39
SRGAP1-202ENST00000537556 LENEPQ9Y5L5 61 aa6.35□□□□□ -1.39
SRGAP1-202ENST00000537556 IGHV1-58A0A0C4DH39 117 aa6.34□□□□□ -1.39
SRGAP1-202ENST00000537556 A0A0J9YXV3 536 aa6.34□□□□□ -1.39
SRGAP1-202ENST00000537556 TRBV27A0A0K0K1C4 114 aa6.34□□□□□ -1.39
SRGAP1-202ENST00000537556 CIRBPQ14011 172 aaKnown RBP6.34□□□□□ -1.39
SRGAP1-202ENST00000537556 S100A7L2Q5SY68 101 aa6.34□□□□□ -1.39
SRGAP1-202ENST00000537556 MYO15AQ9UKN7 3530 aa6.34□□□□□ -1.39
SRGAP1-202ENST00000537556 TRAV21A0A0B4J279 112 aa6.34□□□□□ -1.39
SRGAP1-202ENST00000537556 CFAP54Q96N23 3096 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms