RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 VAX2Q9UIW0 290 aa8.95□□□□□ -0.98
PRKDC-206ENST00000536429 GAGE12JA6NER3 117 aa8.94□□□□□ -0.98
PRKDC-206ENST00000536429 LINC00694P0DN24 101 aa8.94□□□□□ -0.98
PRKDC-206ENST00000536429 GZMBP10144 247 aa8.94□□□□□ -0.98
PRKDC-206ENST00000536429 GAGE1Q13065 139 aa8.94□□□□□ -0.98
PRKDC-206ENST00000536429 GAGE4Q13068 117 aa8.94□□□□□ -0.98
PRKDC-206ENST00000536429 GAGE5Q13069 117 aa8.94□□□□□ -0.98
PRKDC-206ENST00000536429 GAGE13Q4V321 117 aa8.94□□□□□ -0.98
PRKDC-206ENST00000536429 Q6ZRN7 208 aaPredicted RBP8.94□□□□□ -0.98
PRKDC-206ENST00000536429 ZFP82Q8N141 532 aa8.94□□□□□ -0.98
PRKDC-206ENST00000536429 C19orf71A6NCJ1 209 aa8.93□□□□□ -0.98
PRKDC-206ENST00000536429 SNAI2O43623 268 aa8.93□□□□□ -0.98
PRKDC-206ENST00000536429 CXCL1P09341 107 aa8.93□□□□□ -0.98
PRKDC-206ENST00000536429 MED14OSP0DP75 135 aa8.93□□□□□ -0.98
PRKDC-206ENST00000536429 GNG4P50150 75 aa8.93□□□□□ -0.98
PRKDC-206ENST00000536429 TIRAPP58753 221 aa8.93□□□□□ -0.98
PRKDC-206ENST00000536429 SSTP61278 116 aa8.93□□□□□ -0.98
PRKDC-206ENST00000536429 SH2D6Q7Z4S9 175 aa8.93□□□□□ -0.98
PRKDC-206ENST00000536429 LYPD6BQ8NI32 183 aa8.93□□□□□ -0.98
PRKDC-206ENST00000536429 SSBP4Q9BWG4 385 aaPredicted RBP8.93□□□□□ -0.98
PRKDC-206ENST00000536429 LY96Q9Y6Y9 160 aa8.93□□□□□ -0.98
PRKDC-206ENST00000536429 DNAH10OSP0CZ25 163 aa8.92□□□□□ -0.98
PRKDC-206ENST00000536429 ATP6V0E2Q8NHE4 81 aa8.92□□□□□ -0.98
PRKDC-206ENST00000536429 RBFOX3A6NFN3 312 aa8.91□□□□□ -0.98
PRKDC-206ENST00000536429 RHODO00212 210 aa8.91□□□□□ -0.98
PRKDC-206ENST00000536429 OR5AL1P0C617 328 aa8.91□□□□□ -0.98
PRKDC-206ENST00000536429 BLOC1S1P78537 153 aa8.91□□□□□ -0.98
PRKDC-206ENST00000536429 OR2D3Q8NGH3 330 aa8.91□□□□□ -0.98
PRKDC-206ENST00000536429 GTSF1LQ9H1H1 148 aa8.91□□□□□ -0.98
PRKDC-206ENST00000536429 K7EN84 100 aa8.9□□□□□ -0.98
PRKDC-206ENST00000536429 TAGLN2P37802 199 aaKnown RBP8.9□□□□□ -0.98
PRKDC-206ENST00000536429 LELP1Q5T871 98 aa8.9□□□□□ -0.98
PRKDC-206ENST00000536429 Q8N3U1 123 aa8.9□□□□□ -0.98
PRKDC-206ENST00000536429 IGHV3-38A0A0C4DH36 116 aa8.89□□□□□ -0.99
PRKDC-206ENST00000536429 IGLC6P0CF74 106 aa8.89□□□□□ -0.99
PRKDC-206ENST00000536429 BTF3P20290 206 aaKnown RBP8.89□□□□□ -0.99
PRKDC-206ENST00000536429 OR10J3Q5JRS4 329 aa8.89□□□□□ -0.99
PRKDC-206ENST00000536429 SPANXN1Q5VSR9 72 aa8.89□□□□□ -0.99
PRKDC-206ENST00000536429 DAZAP1Q96EP5 407 aaKnown RBP8.89□□□□□ -0.99
PRKDC-206ENST00000536429 SMIM12Q96EX1 92 aa8.89□□□□□ -0.99
PRKDC-206ENST00000536429 TPPP3Q9BW30 176 aa8.89□□□□□ -0.99
PRKDC-206ENST00000536429 P01737 135 aa8.88□□□□□ -0.99
PRKDC-206ENST00000536429 EVI2AP22794 236 aa8.88□□□□□ -0.99
PRKDC-206ENST00000536429 KRTAP10-2P60368 255 aa8.88□□□□□ -0.99
PRKDC-206ENST00000536429 LINC01556Q5JQF7 62 aa8.88□□□□□ -0.99
PRKDC-206ENST00000536429 TOR2AQ5JU69 321 aa8.88□□□□□ -0.99
PRKDC-206ENST00000536429 FER1L6-AS1Q8NA97 138 aa8.88□□□□□ -0.99
PRKDC-206ENST00000536429 NUDT10Q8NFP7 164 aa8.88□□□□□ -0.99
PRKDC-206ENST00000536429 OCC1Q8TAD7 63 aa8.88□□□□□ -0.99
PRKDC-206ENST00000536429 NUDT11Q96G61 164 aa8.88□□□□□ -0.99
PRKDC-206ENST00000536429 MSRB1Q9NZV6 116 aa8.88□□□□□ -0.99
PRKDC-206ENST00000536429 KIF25-AS1Q9Y6Z4 181 aa8.88□□□□□ -0.99
PRKDC-206ENST00000536429 TRAV8-6A0A0B4J262 113 aa8.87□□□□□ -0.99
PRKDC-206ENST00000536429 IGHV3-30P01768 117 aa8.87□□□□□ -0.99
PRKDC-206ENST00000536429 IGHV3-33P01772 117 aa8.87□□□□□ -0.99
PRKDC-206ENST00000536429 IGHV3-30-3P0DP02 117 aa8.87□□□□□ -0.99
PRKDC-206ENST00000536429 IGHV3-30-5P0DP03 117 aa8.87□□□□□ -0.99
PRKDC-206ENST00000536429 CEBPGP53567 150 aa8.87□□□□□ -0.99
PRKDC-206ENST00000536429 RPS20P60866 119 aaKnown RBP8.87□□□□□ -0.99
PRKDC-206ENST00000536429 SPATA12Q7Z6I5 190 aa8.87□□□□□ -0.99
PRKDC-206ENST00000536429 RNASE7Q9H1E1 156 aaKnown RBP8.87□□□□□ -0.99
PRKDC-206ENST00000536429 TRAV9-2A0A087WT02 112 aa8.86□□□□□ -0.99
PRKDC-206ENST00000536429 TMEM250H0YL14 139 aa8.86□□□□□ -0.99
PRKDC-206ENST00000536429 FUSP35637 526 aaKnown RBP eCLIP8.86□□□□□ -0.99
PRKDC-206ENST00000536429 ZNF56Q15929 161 aa8.86□□□□□ -0.99
PRKDC-206ENST00000536429 ABCA13Q86UQ4 5058 aa8.86□□□□□ -0.99
PRKDC-206ENST00000536429 DNAH8Q96JB1 4490 aa8.86□□□□□ -0.99
PRKDC-206ENST00000536429 C16orf90A8MZG2 172 aa8.85□□□□□ -0.99
PRKDC-206ENST00000536429 RAB4BP61018 213 aa8.85□□□□□ -0.99
PRKDC-206ENST00000536429 UBE2D3P61077 147 aa8.85□□□□□ -0.99
PRKDC-206ENST00000536429 UBE2D2P62837 147 aa8.85□□□□□ -0.99
PRKDC-206ENST00000536429 LYZL1Q6UWQ5 148 aa8.85□□□□□ -0.99
PRKDC-206ENST00000536429 NEXN-AS1Q8NBZ9 246 aa8.85□□□□□ -0.99
PRKDC-206ENST00000536429 FAM210AQ96ND0 272 aa8.85□□□□□ -0.99
PRKDC-206ENST00000536429 TRBV10-1A0A0K0K1A3 114 aa8.84□□□□□ -0.99
PRKDC-206ENST00000536429 K7EP13 123 aa8.84□□□□□ -0.99
PRKDC-206ENST00000536429 C10orf126Q8N4M7 172 aa8.84□□□□□ -0.99
PRKDC-206ENST00000536429 OR10G8Q8NGN5 311 aa8.84□□□□□ -0.99
PRKDC-206ENST00000536429 AP1S3Q96PC3 154 aa8.84□□□□□ -0.99
PRKDC-206ENST00000536429 EIF5A2Q9GZV4 153 aaKnown RBP8.84□□□□□ -0.99
PRKDC-206ENST00000536429 RPP21Q9H633 154 aaKnown RBP8.84□□□□□ -0.99
PRKDC-206ENST00000536429 BIN3Q9NQY0 253 aa8.84□□□□□ -0.99
PRKDC-206ENST00000536429 PCLOQ9Y6V0 5065 aa8.83□□□□□ -1
PRKDC-206ENST00000536429 TRBV7-3A0A075B6L6 115 aa8.83□□□□□ -1
PRKDC-206ENST00000536429 IBA57-AS1B1ANH7 110 aa8.83□□□□□ -1
PRKDC-206ENST00000536429 F5H697 171 aa8.83□□□□□ -1
PRKDC-206ENST00000536429 SRP19P09132 144 aaKnown RBP8.83□□□□□ -1
PRKDC-206ENST00000536429 RPL36AP83881 106 aaKnown RBP8.83□□□□□ -1
PRKDC-206ENST00000536429 NFE4Q86UQ8 179 aa8.83□□□□□ -1
PRKDC-206ENST00000536429 GTSF1Q8WW33 167 aa8.83□□□□□ -1
PRKDC-206ENST00000536429 RPL36ALQ969Q0 106 aaKnown RBP8.83□□□□□ -1
PRKDC-206ENST00000536429 Q9HAA7 133 aa8.83□□□□□ -1
PRKDC-206ENST00000536429 A0A087WTM6 91 aa8.82□□□□□ -1
PRKDC-206ENST00000536429 XKRY2A2RUG3 117 aa8.82□□□□□ -1
PRKDC-206ENST00000536429 C9JQL5 133 aa8.82□□□□□ -1
PRKDC-206ENST00000536429 MGPP08493 103 aa8.82□□□□□ -1
PRKDC-206ENST00000536429 SMIM17P0DL12 118 aa8.82□□□□□ -1
PRKDC-206ENST00000536429 CTRLP40313 264 aa8.82□□□□□ -1
PRKDC-206ENST00000536429 CACNG7P62955 275 aa8.82□□□□□ -1
PRKDC-206ENST00000536429 TEX261Q6UWH6 196 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 237.5 ms