RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 SCGB3A1Q96QR1 104 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 POLEQ07864 2286 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 A0A087WWL8 130 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 IGHV3-35A0A0C4DH35 117 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 TRBV7-7A0A0K0K1E9 115 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 J3QQQ9 107 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 UPK2O00526 184 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 MRPL33O75394 65 aaKnown RBP2.83□□□□□ -1.96
MCF2-210ENST00000536274 IGHG4P01861 327 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 PCBD1P61457 104 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 C22orf34Q6ZV56 151 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 GGNQ86UU5 652 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 TMEM86BQ8N661 226 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 WDR31Q8NA23 367 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 DEFB108BQ8NET1 73 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 RPL39LQ96EH5 51 aaKnown RBP2.83□□□□□ -1.96
MCF2-210ENST00000536274 METTL26Q96S19 204 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 OPRPNQ99935 248 aaPredicted RBP2.83□□□□□ -1.96
MCF2-210ENST00000536274 TRBV10-2A0A0K0K1G8 114 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 CCL21O00585 134 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 COX6A1P12074 109 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 LAGE3Q14657 143 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 POU2AF1Q16633 256 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 DAND5Q8N907 189 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 WFDC9Q8NEX5 89 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 TMEM263Q8WUH6 116 aaKnown RBP2.83□□□□□ -1.96
MCF2-210ENST00000536274 BRK1Q8WUW1 75 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 DPH3P1Q9H4G8 78 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 ZNF462Q96JM2 2506 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 PRRC2AP48634 2157 aaKnown RBP2.82□□□□□ -1.96
MCF2-210ENST00000536274 FASNP49327 2511 aaKnown RBP2.82□□□□□ -1.96
MCF2-210ENST00000536274 A0A0G2JNJ9 132 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 PINLYPA6NC86 204 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 ZNF415Q09FC8 603 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 FHL2Q14192 279 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 SS18Q15532 418 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 ATXN8Q156A1 80 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 OTORQ9NRC9 128 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 LINC00474Q9P2X8 69 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 Q9UFV3 132 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 CFAP46Q8IYW2 2715 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 WNK2Q9Y3S1 2297 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 RAI1Q7Z5J4 1906 aaPredicted RBP2.82□□□□□ -1.96
MCF2-210ENST00000536274 TRBV7-1A0A0A6YYK4 115 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 IQCF6A8MYZ5 107 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 A8MZ25 164 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 SHISA9B4DS77 424 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 CCL4P13236 92 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 GNLYP22749 145 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 PLNP26678 52 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 ATP5IP56385 69 aaPredicted RBP2.82□□□□□ -1.96
MCF2-210ENST00000536274 RPL39P62891 51 aaKnown RBP2.82□□□□□ -1.96
MCF2-210ENST00000536274 DEFB109BQ30KR1 87 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 MRAPQ8TCY5 172 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 HES7Q9BYE0 225 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 SLC25A39Q9BZJ4 359 aaPredicted RBP2.82□□□□□ -1.96
MCF2-210ENST00000536274 CSMD2Q7Z408 3487 aa2.82□□□□□ -1.96
MCF2-210ENST00000536274 IGLV3-12A0A075B6K2 115 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 CRYGDP07320 174 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 RPL13AP40429 203 aaKnown RBP2.81□□□□□ -1.96
MCF2-210ENST00000536274 B3GALT5-AS1P59052 145 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 C8orf31Q8N9H6 132 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 NEXN-AS1Q8NBZ9 246 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 C11orf21Q9P2W6 132 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 PRO0628Q9UI54 55 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 V9GYY9 64 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 LRBAP50851 2863 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 PCNX1Q96RV3 2341 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 IGKV1D-17A0A075B6S4 117 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 IGHV3OR16-13A0A075B7E8 117 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 IGHV3-74A0A0B4J1X5 117 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 A0A0U1RRA0 63 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 NXPH4O95158 308 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 IGHV3-23P01764 117 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 CRYGAP11844 174 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 HILS1P60008 231 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 ERHP84090 104 aaKnown RBP2.81□□□□□ -1.96
MCF2-210ENST00000536274 RPS19BP1Q86WX3 136 aaKnown RBP2.81□□□□□ -1.96
MCF2-210ENST00000536274 ZNRF2Q8NHG8 242 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 NDUFA4L2Q9NRX3 87 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 DCHS2Q6V1P9 2916 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 SORL1Q92673 2214 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 ZFYVE26Q68DK2 2539 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 C17orf100A8MU93 164 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 PRAC2D3DTV9 90 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 SS18L1O75177 396 aaPredicted RBP2.81□□□□□ -1.96
MCF2-210ENST00000536274 RPS28P62857 69 aaKnown RBP2.81□□□□□ -1.96
MCF2-210ENST00000536274 PTPN13Q12923 2485 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 SPATA3Q8NHX4 192 aa2.81□□□□□ -1.96
MCF2-210ENST00000536274 BSNQ9UPA5 3926 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 TRBV19A0A075B6N1 114 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 IGLV3-32A0A0A0MS00 114 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 IGHV3-66A0A0C4DH42 116 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 FAM223BA6NKX1 122 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 TSHBP01222 138 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 CRYGBP07316 175 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 PLGLB1Q02325 96 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 C17orf58Q2M2W7 97 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 C9orf129Q5T035 196 aaKnown RBP2.8□□□□□ -1.96
MCF2-210ENST00000536274 C1orf195Q5TG92 126 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms