RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 TRIAP1O43715 76 aa5.16□□□□□ -1.58
CPSF7-215ENST00000536145 CD3EP07766 207 aa5.16□□□□□ -1.58
CPSF7-215ENST00000536145 TTC32Q5I0X7 151 aa5.16□□□□□ -1.58
CPSF7-215ENST00000536145 TMEM170BQ5T4T1 132 aa5.16□□□□□ -1.58
CPSF7-215ENST00000536145 FAM159AQ6UWV7 190 aa5.16□□□□□ -1.58
CPSF7-215ENST00000536145 OR10J6PQ8NGY7 276 aa5.16□□□□□ -1.58
CPSF7-215ENST00000536145 FAM104AQ969W3 186 aa5.16□□□□□ -1.58
CPSF7-215ENST00000536145 UBE2WQ96B02 151 aa5.16□□□□□ -1.58
CPSF7-215ENST00000536145 C16orf92Q96LL3 132 aa5.16□□□□□ -1.58
CPSF7-215ENST00000536145 SPANXDQ9BXN6 97 aa5.16□□□□□ -1.58
CPSF7-215ENST00000536145 SPANXCQ9NY87 97 aa5.16□□□□□ -1.58
CPSF7-215ENST00000536145 PHLDA3Q9Y5J5 127 aa5.16□□□□□ -1.58
CPSF7-215ENST00000536145 EP300Q09472 2414 aaPredicted RBP5.15□□□□□ -1.58
CPSF7-215ENST00000536145 KLLNB2CW77 178 aa5.15□□□□□ -1.59
CPSF7-215ENST00000536145 H7C423 109 aa5.15□□□□□ -1.59
CPSF7-215ENST00000536145 S100A4P26447 101 aaKnown RBP5.15□□□□□ -1.59
CPSF7-215ENST00000536145 SMIM20Q8N5G0 67 aa5.15□□□□□ -1.59
CPSF7-215ENST00000536145 C9orf85Q96MD7 179 aa5.15□□□□□ -1.59
CPSF7-215ENST00000536145 JPT2Q9H910 190 aa5.15□□□□□ -1.59
CPSF7-215ENST00000536145 LAMA1P25391 3075 aa5.15□□□□□ -1.59
CPSF7-215ENST00000536145 IGLV4-3A0A075B6K6 122 aa5.14□□□□□ -1.59
CPSF7-215ENST00000536145 TRAV2A0A0B4J234 112 aa5.14□□□□□ -1.59
CPSF7-215ENST00000536145 TEX49A0A1B0GTD5 131 aa5.14□□□□□ -1.59
CPSF7-215ENST00000536145 G3V318 75 aa5.14□□□□□ -1.59
CPSF7-215ENST00000536145 ARL3P36405 182 aa5.14□□□□□ -1.59
CPSF7-215ENST00000536145 DEFB1P60022 68 aa5.14□□□□□ -1.59
CPSF7-215ENST00000536145 ECSCRQ19T08 205 aa5.14□□□□□ -1.59
CPSF7-215ENST00000536145 C11orf71Q6IPW1 123 aa5.14□□□□□ -1.59
CPSF7-215ENST00000536145 SDIM1Q6ZPB5 146 aa5.14□□□□□ -1.59
CPSF7-215ENST00000536145 Q8NA96 180 aa5.14□□□□□ -1.59
CPSF7-215ENST00000536145 C20orf203Q8NBC4 194 aa5.14□□□□□ -1.59
CPSF7-215ENST00000536145 TMEM126AQ9H061 195 aa5.14□□□□□ -1.59
CPSF7-215ENST00000536145 ICOSQ9Y6W8 199 aa5.14□□□□□ -1.59
CPSF7-215ENST00000536145 FAM186AA6NE01 2351 aa5.14□□□□□ -1.59
CPSF7-215ENST00000536145 A0A0J9YXV3 536 aa5.13□□□□□ -1.59
CPSF7-215ENST00000536145 FAM223BA6NKX1 122 aa5.13□□□□□ -1.59
CPSF7-215ENST00000536145 M0QY20 66 aa5.13□□□□□ -1.59
CPSF7-215ENST00000536145 LST1O00453 97 aa5.13□□□□□ -1.59
CPSF7-215ENST00000536145 NDUFA4O00483 81 aa5.13□□□□□ -1.59
CPSF7-215ENST00000536145 IGHV4-39P01824 125 aa5.13□□□□□ -1.59
CPSF7-215ENST00000536145 UBE2E1P51965 193 aa5.13□□□□□ -1.59
CPSF7-215ENST00000536145 LY6DQ14210 128 aa5.13□□□□□ -1.59
CPSF7-215ENST00000536145 FBXL19-AS1Q494R0 122 aa5.13□□□□□ -1.59
CPSF7-215ENST00000536145 C2orf82Q6UX34 121 aa5.13□□□□□ -1.59
CPSF7-215ENST00000536145 FAM223AQ8IWN6 122 aa5.13□□□□□ -1.59
CPSF7-215ENST00000536145 OPRPNQ99935 248 aaPredicted RBP5.13□□□□□ -1.59
CPSF7-215ENST00000536145 EDA2RQ9HAV5 297 aa5.13□□□□□ -1.59
CPSF7-215ENST00000536145 ZNF580Q9UK33 172 aa5.13□□□□□ -1.59
CPSF7-215ENST00000536145 ZNF256Q9Y2P7 627 aaPredicted RBP5.13□□□□□ -1.59
CPSF7-215ENST00000536145 ZFHX2Q9C0A1 2572 aaPredicted RBP5.12□□□□□ -1.59
CPSF7-215ENST00000536145 ABCA1O95477 2261 aa5.12□□□□□ -1.59
CPSF7-215ENST00000536145 MUC6Q6W4X9 2439 aa5.12□□□□□ -1.59
CPSF7-215ENST00000536145 IGHV3-16A0A0C4DH30 117 aa5.12□□□□□ -1.59
CPSF7-215ENST00000536145 J3KRW8 73 aa5.12□□□□□ -1.59
CPSF7-215ENST00000536145 TIMM17BO60830 172 aa5.12□□□□□ -1.59
CPSF7-215ENST00000536145 ZFP36P26651 326 aaKnown RBP5.12□□□□□ -1.59
CPSF7-215ENST00000536145 MRPS36P82909 103 aaKnown RBP5.12□□□□□ -1.59
CPSF7-215ENST00000536145 MEIG1Q5JSS6 88 aa5.12□□□□□ -1.59
CPSF7-215ENST00000536145 ADAMTSL4-AS1Q5T5F5 129 aa5.12□□□□□ -1.59
CPSF7-215ENST00000536145 UNQ9165/PRO28630Q6UXU0 137 aa5.12□□□□□ -1.59
CPSF7-215ENST00000536145 C5orf56Q8N8D9 126 aa5.12□□□□□ -1.59
CPSF7-215ENST00000536145 IMUPQ9GZP8 106 aa5.12□□□□□ -1.59
CPSF7-215ENST00000536145 VPREB3Q9UKI3 123 aa5.12□□□□□ -1.59
CPSF7-215ENST00000536145 PYGO1Q9Y3Y4 419 aa5.12□□□□□ -1.59
CPSF7-215ENST00000536145 RIF1Q5UIP0 2472 aaKnown RBP5.12□□□□□ -1.59
CPSF7-215ENST00000536145 PLCE1Q9P212 2302 aa5.11□□□□□ -1.59
CPSF7-215ENST00000536145 F6UB75 175 aa5.11□□□□□ -1.59
CPSF7-215ENST00000536145 H7C2G1 150 aa5.11□□□□□ -1.59
CPSF7-215ENST00000536145 LY6HO94772 140 aa5.11□□□□□ -1.59
CPSF7-215ENST00000536145 IGHV3-30-3P0DP02 117 aa5.11□□□□□ -1.59
CPSF7-215ENST00000536145 MIAQ16674 131 aa5.11□□□□□ -1.59
CPSF7-215ENST00000536145 RNF152Q8N8N0 203 aa5.11□□□□□ -1.59
CPSF7-215ENST00000536145 DCANP1Q8TF63 244 aa5.11□□□□□ -1.59
CPSF7-215ENST00000536145 MUC4Q99102 2169 aa5.11□□□□□ -1.59
CPSF7-215ENST00000536145 WDR87Q6ZQQ6 2873 aa5.1□□□□□ -1.59
CPSF7-215ENST00000536145 A0A087WWL8 130 aa5.1□□□□□ -1.59
CPSF7-215ENST00000536145 IGHV1-58A0A0C4DH39 117 aa5.1□□□□□ -1.59
CPSF7-215ENST00000536145 I3L3M4 83 aa5.1□□□□□ -1.59
CPSF7-215ENST00000536145 TRBV12-3P01733 135 aa5.1□□□□□ -1.59
CPSF7-215ENST00000536145 TMEM61Q8N0U2 210 aa5.1□□□□□ -1.59
CPSF7-215ENST00000536145 LINC01560Q8TB33 94 aa5.1□□□□□ -1.59
CPSF7-215ENST00000536145 CLEC2BQ92478 149 aa5.1□□□□□ -1.59
CPSF7-215ENST00000536145 VPS13AQ96RL7 3174 aa5.1□□□□□ -1.59
CPSF7-215ENST00000536145 ICE1Q9Y2F5 2266 aa5.09□□□□□ -1.59
CPSF7-215ENST00000536145 TRAV41A0A0B4J266 112 aa5.09□□□□□ -1.59
CPSF7-215ENST00000536145 H3BUA1 57 aa5.09□□□□□ -1.59
CPSF7-215ENST00000536145 ACYP1P07311 99 aa5.09□□□□□ -1.59
CPSF7-215ENST00000536145 ZNF56Q15929 161 aa5.09□□□□□ -1.59
CPSF7-215ENST00000536145 Q1RN00 199 aa5.09□□□□□ -1.59
CPSF7-215ENST00000536145 BEAN1Q3B7T3 259 aa5.09□□□□□ -1.59
CPSF7-215ENST00000536145 Q6ZSV7 163 aa5.09□□□□□ -1.59
CPSF7-215ENST00000536145 C5orf38Q86SI9 138 aa5.09□□□□□ -1.59
CPSF7-215ENST00000536145 DEFB104AQ8WTQ1 72 aa5.09□□□□□ -1.59
CPSF7-215ENST00000536145 DNAJC30Q96LL9 226 aa5.09□□□□□ -1.59
CPSF7-215ENST00000536145 DUX3Q96PT4 197 aa5.09□□□□□ -1.59
CPSF7-215ENST00000536145 CHCHD5Q9BSY4 110 aa5.09□□□□□ -1.59
CPSF7-215ENST00000536145 BEX4Q9NWD9 120 aaPredicted RBP5.09□□□□□ -1.59
CPSF7-215ENST00000536145 C22orf24Q9Y442 160 aa5.09□□□□□ -1.59
CPSF7-215ENST00000536145 CUL9Q8IWT3 2517 aa5.08□□□□□ -1.6
CPSF7-215ENST00000536145 TRGV11A0A075B6L2 103 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms