RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 PEA15Q15121 130 aa12.3□□□□□ -0.44
DDX55-204ENST00000536079 MRPL23Q16540 153 aaKnown RBP12.3□□□□□ -0.44
DDX55-204ENST00000536079 RPP21Q9H633 154 aaKnown RBP12.3□□□□□ -0.44
DDX55-204ENST00000536079 LY96Q9Y6Y9 160 aa12.3□□□□□ -0.44
DDX55-204ENST00000536079 EPPK1P58107 5090 aaKnown RBP12.29□□□□□ -0.44
DDX55-204ENST00000536079 TRBV6-4A0A1B0GX49 114 aa12.29□□□□□ -0.44
DDX55-204ENST00000536079 CIDEAO60543 219 aa12.29□□□□□ -0.44
DDX55-204ENST00000536079 SPANXN1Q5VSR9 72 aa12.29□□□□□ -0.44
DDX55-204ENST00000536079 LYZL1Q6UWQ5 148 aa12.29□□□□□ -0.44
DDX55-204ENST00000536079 GTSF1Q8WW33 167 aa12.29□□□□□ -0.44
DDX55-204ENST00000536079 MRPS16Q9Y3D3 137 aaKnown RBP12.29□□□□□ -0.44
DDX55-204ENST00000536079 SRIP30626 198 aa12.28□□□□□ -0.44
DDX55-204ENST00000536079 FAM3BP58499 235 aaPredicted RBP12.28□□□□□ -0.44
DDX55-204ENST00000536079 Q6ZR54 194 aa12.28□□□□□ -0.44
DDX55-204ENST00000536079 FAM231DQ6ZW35 169 aa12.28□□□□□ -0.44
DDX55-204ENST00000536079 NEGR1Q7Z3B1 354 aa12.28□□□□□ -0.44
DDX55-204ENST00000536079 RHOHQ15669 191 aa12.27□□□□□ -0.45
DDX55-204ENST00000536079 CLLU1Q5K131 121 aa12.27□□□□□ -0.45
DDX55-204ENST00000536079 PRADC1Q9BSG0 188 aa12.27□□□□□ -0.45
DDX55-204ENST00000536079 UPK3BQ9BT76 320 aa12.27□□□□□ -0.45
DDX55-204ENST00000536079 KIF25-AS1Q9Y6Z4 181 aa12.27□□□□□ -0.45
DDX55-204ENST00000536079 GAGE12JA6NER3 117 aa12.26□□□□□ -0.45
DDX55-204ENST00000536079 GATCO43716 136 aaKnown RBP12.26□□□□□ -0.45
DDX55-204ENST00000536079 LINC00694P0DN24 101 aa12.26□□□□□ -0.45
DDX55-204ENST00000536079 LINC00315P59091 139 aa12.26□□□□□ -0.45
DDX55-204ENST00000536079 ERVFC1-1P60608 527 aa12.26□□□□□ -0.45
DDX55-204ENST00000536079 RAB14P61106 215 aa12.26□□□□□ -0.45
DDX55-204ENST00000536079 RPL23P62829 140 aaKnown RBP12.26□□□□□ -0.45
DDX55-204ENST00000536079 GAGE1Q13065 139 aa12.26□□□□□ -0.45
DDX55-204ENST00000536079 GAGE4Q13068 117 aa12.26□□□□□ -0.45
DDX55-204ENST00000536079 GAGE5Q13069 117 aa12.26□□□□□ -0.45
DDX55-204ENST00000536079 TMEM241Q24JQ0 296 aa12.26□□□□□ -0.45
DDX55-204ENST00000536079 GAGE13Q4V321 117 aa12.26□□□□□ -0.45
DDX55-204ENST00000536079 Q9H8V8 135 aa12.26□□□□□ -0.45
DDX55-204ENST00000536079 DNAH17Q9UFH2 4485 aa12.25□□□□□ -0.45
DDX55-204ENST00000536079 XKRY2A2RUG3 117 aa12.25□□□□□ -0.45
DDX55-204ENST00000536079 RHODO00212 210 aa12.25□□□□□ -0.45
DDX55-204ENST00000536079 CTRLP40313 264 aa12.25□□□□□ -0.45
DDX55-204ENST00000536079 ISOC2Q96AB3 205 aa12.25□□□□□ -0.45
DDX55-204ENST00000536079 KRTAP1-5Q9BYS1 174 aa12.25□□□□□ -0.45
DDX55-204ENST00000536079 SMDT1Q9H4I9 107 aa12.25□□□□□ -0.45
DDX55-204ENST00000536079 FAM74A3Q4VXF1 159 aa12.24□□□□□ -0.45
DDX55-204ENST00000536079 A0A1W2PPQ1 181 aa12.23□□□□□ -0.45
DDX55-204ENST00000536079 NTF3P20783 257 aa12.23□□□□□ -0.45
DDX55-204ENST00000536079 OSTCQ9NRP0 149 aa12.23□□□□□ -0.45
DDX55-204ENST00000536079 NAT8Q9UHE5 227 aa12.23□□□□□ -0.45
DDX55-204ENST00000536079 NBDYA0A0U1RRE5 68 aa12.22□□□□□ -0.45
DDX55-204ENST00000536079 F2Z2F3 143 aa12.22□□□□□ -0.45
DDX55-204ENST00000536079 EVI2AP22794 236 aa12.22□□□□□ -0.45
DDX55-204ENST00000536079 CACNG7P62955 275 aa12.22□□□□□ -0.45
DDX55-204ENST00000536079 ADIRFQ15847 76 aa12.22□□□□□ -0.45
DDX55-204ENST00000536079 SOHLH1Q5JUK2 328 aa12.22□□□□□ -0.45
DDX55-204ENST00000536079 CNFNQ9BYD5 112 aa12.22□□□□□ -0.45
DDX55-204ENST00000536079 V9GYV3 84 aa12.22□□□□□ -0.45
DDX55-204ENST00000536079 FAT2Q9NYQ8 4349 aa12.22□□□□□ -0.45
DDX55-204ENST00000536079 FOXA3P55318 350 aaPredicted RBP12.21□□□□□ -0.45
DDX55-204ENST00000536079 RAB4BP61018 213 aa12.21□□□□□ -0.45
DDX55-204ENST00000536079 ZNF56Q15929 161 aa12.21□□□□□ -0.45
DDX55-204ENST00000536079 WFDC10BQ8IUB3 73 aa12.21□□□□□ -0.45
DDX55-204ENST00000536079 PGLYRP4Q96LB8 373 aa12.21□□□□□ -0.45
DDX55-204ENST00000536079 RTL8CO15255 209 aa12.2□□□□□ -0.46
DDX55-204ENST00000536079 CT83Q5H943 113 aa12.2□□□□□ -0.46
DDX55-204ENST00000536079 WDR73Q6P4I2 378 aa12.2□□□□□ -0.46
DDX55-204ENST00000536079 ATP6V0E2Q8NHE4 81 aa12.2□□□□□ -0.46
DDX55-204ENST00000536079 AP1S3Q96PC3 154 aa12.2□□□□□ -0.46
DDX55-204ENST00000536079 A8MWL6 223 aa12.19□□□□□ -0.46
DDX55-204ENST00000536079 TWIST1Q15672 202 aa12.19□□□□□ -0.46
DDX55-204ENST00000536079 SH2D6Q7Z4S9 175 aa12.19□□□□□ -0.46
DDX55-204ENST00000536079 NEXN-AS1Q8NBZ9 246 aa12.19□□□□□ -0.46
DDX55-204ENST00000536079 F5H697 171 aa12.18□□□□□ -0.46
DDX55-204ENST00000536079 SIVA1O15304 175 aa12.18□□□□□ -0.46
DDX55-204ENST00000536079 MGPP08493 103 aa12.18□□□□□ -0.46
DDX55-204ENST00000536079 TIRAPP58753 221 aa12.18□□□□□ -0.46
DDX55-204ENST00000536079 TSKUQ8WUA8 353 aa12.18□□□□□ -0.46
DDX55-204ENST00000536079 GTSF1LQ9H1H1 148 aa12.18□□□□□ -0.46
DDX55-204ENST00000536079 HIGD1CA8MV81 97 aa12.17□□□□□ -0.46
DDX55-204ENST00000536079 SUMO4Q6EEV6 95 aa12.17□□□□□ -0.46
DDX55-204ENST00000536079 OR10G8Q8NGN5 311 aa12.17□□□□□ -0.46
DDX55-204ENST00000536079 TRBV10-1A0A0K0K1A3 114 aa12.16□□□□□ -0.46
DDX55-204ENST00000536079 M0QY20 66 aa12.16□□□□□ -0.46
DDX55-204ENST00000536079 SMIM17P0DL12 118 aa12.16□□□□□ -0.46
DDX55-204ENST00000536079 UBE2D3P61077 147 aa12.16□□□□□ -0.46
DDX55-204ENST00000536079 UBE2D2P62837 147 aa12.16□□□□□ -0.46
DDX55-204ENST00000536079 C15orf54Q8N8G6 183 aa12.16□□□□□ -0.46
DDX55-204ENST00000536079 Q8N3U1 123 aa12.15□□□□□ -0.46
DDX55-204ENST00000536079 GFRA4Q9GZZ7 299 aa12.15□□□□□ -0.46
DDX55-204ENST00000536079 BIRC6Q9NR09 4857 aa12.14□□□□□ -0.47
DDX55-204ENST00000536079 TRBV7-3A0A075B6L6 115 aa12.14□□□□□ -0.47
DDX55-204ENST00000536079 TRGC1P0CF51 173 aa12.14□□□□□ -0.47
DDX55-204ENST00000536079 ADCYAP1P18509 176 aa12.14□□□□□ -0.47
DDX55-204ENST00000536079 LELP1Q5T871 98 aa12.14□□□□□ -0.47
DDX55-204ENST00000536079 C1orf134Q5TEV5 83 aa12.14□□□□□ -0.47
DDX55-204ENST00000536079 NUP35Q8NFH5 326 aa12.14□□□□□ -0.47
DDX55-204ENST00000536079 DPH3P1Q9H4G8 78 aa12.14□□□□□ -0.47
DDX55-204ENST00000536079 TNFRSF18Q9Y5U5 241 aa12.14□□□□□ -0.47
DDX55-204ENST00000536079 IGHV3-38A0A0C4DH36 116 aa12.13□□□□□ -0.47
DDX55-204ENST00000536079 RPL36AP83881 106 aaKnown RBP12.13□□□□□ -0.47
DDX55-204ENST00000536079 RPL36ALQ969Q0 106 aaKnown RBP12.13□□□□□ -0.47
DDX55-204ENST00000536079 TRAV26-2A0A0B4J265 109 aa12.12□□□□□ -0.47
DDX55-204ENST00000536079 SMIM27A0A1W2PRY6 76 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms