RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 SSBP4Q9BWG4 385 aaPredicted RBP15.07■□□□□ 0
SSPN-204ENST00000535504 ZNF727A8MUV8 499 aa15.06■□□□□ 0
SSPN-204ENST00000535504 SSTP61278 116 aa15.06■□□□□ 0
SSPN-204ENST00000535504 ZNF56Q15929 161 aa15.06■□□□□ 0
SSPN-204ENST00000535504 ATP6V0E2Q8NHE4 81 aa15.06■□□□□ 0
SSPN-204ENST00000535504 SAMD10Q9BYL1 202 aa15.06■□□□□ 0
SSPN-204ENST00000535504 RPP21Q9H633 154 aaKnown RBP15.06■□□□□ 0
SSPN-204ENST00000535504 LY96Q9Y6Y9 160 aa15.06■□□□□ 0
SSPN-204ENST00000535504 TRAV8-6A0A0B4J262 113 aa15.05■□□□□ -0
SSPN-204ENST00000535504 TIRAPP58753 221 aa15.05■□□□□ -0
SSPN-204ENST00000535504 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.05■□□□□ -0
SSPN-204ENST00000535504 NUDT10Q8NFP7 164 aa15.05■□□□□ -0
SSPN-204ENST00000535504 NUDT11Q96G61 164 aa15.05■□□□□ -0
SSPN-204ENST00000535504 KMT2AQ03164 3969 aa15.04■□□□□ -0
SSPN-204ENST00000535504 GAGE12JA6NER3 117 aa15.04■□□□□ -0
SSPN-204ENST00000535504 F5H697 171 aa15.04■□□□□ -0
SSPN-204ENST00000535504 GZMBP10144 247 aa15.04■□□□□ -0
SSPN-204ENST00000535504 GAGE1Q13065 139 aa15.04■□□□□ -0
SSPN-204ENST00000535504 GAGE4Q13068 117 aa15.04■□□□□ -0
SSPN-204ENST00000535504 GAGE5Q13069 117 aa15.04■□□□□ -0
SSPN-204ENST00000535504 GAGE13Q4V321 117 aa15.04■□□□□ -0
SSPN-204ENST00000535504 C6orf223Q8N319 242 aa15.04■□□□□ -0
SSPN-204ENST00000535504 SMDT1Q9H4I9 107 aa15.04■□□□□ -0
SSPN-204ENST00000535504 MUC21A0A0G2JKD1 596 aa15.03■□□□□ -0
SSPN-204ENST00000535504 MUC21A0A140T8X8 626 aa15.03■□□□□ -0
SSPN-204ENST00000535504 GATCO43716 136 aaKnown RBP15.03■□□□□ -0
SSPN-204ENST00000535504 SRP19P09132 144 aaKnown RBP15.03■□□□□ -0
SSPN-204ENST00000535504 EVI2AP22794 236 aa15.03■□□□□ -0
SSPN-204ENST00000535504 ERVFC1-1P60608 527 aa15.03■□□□□ -0
SSPN-204ENST00000535504 FAM74A3Q4VXF1 159 aa15.03■□□□□ -0
SSPN-204ENST00000535504 OR10J3Q5JRS4 329 aa15.03■□□□□ -0
SSPN-204ENST00000535504 UFSP1Q6NVU6 142 aa15.03■□□□□ -0
SSPN-204ENST00000535504 ZNF575Q86XF7 245 aa15.03■□□□□ -0
SSPN-204ENST00000535504 RNASE7Q9H1E1 156 aaKnown RBP15.03■□□□□ -0
SSPN-204ENST00000535504 TRBV10-1A0A0K0K1A3 114 aa15.02■□□□□ -0
SSPN-204ENST00000535504 CRYGDP07320 174 aa15.02■□□□□ -0
SSPN-204ENST00000535504 TRGC1P0CF51 173 aa15.02■□□□□ -0
SSPN-204ENST00000535504 BTF3P20290 206 aaKnown RBP15.02■□□□□ -0
SSPN-204ENST00000535504 RAB4BP61018 213 aa15.02■□□□□ -0
SSPN-204ENST00000535504 RPL36AP83881 106 aaKnown RBP15.02■□□□□ -0
SSPN-204ENST00000535504 RPL36ALQ969Q0 106 aaKnown RBP15.02■□□□□ -0
SSPN-204ENST00000535504 GTSF1LQ9H1H1 148 aa15.02■□□□□ -0
SSPN-204ENST00000535504 DNAH6Q9C0G6 4158 aa15.02□□□□□ -0.01
SSPN-204ENST00000535504 PRSS29PA6NIE9 313 aa15.01□□□□□ -0.01
SSPN-204ENST00000535504 K7EN84 100 aa15.01□□□□□ -0.01
SSPN-204ENST00000535504 K7EP13 123 aa15.01□□□□□ -0.01
SSPN-204ENST00000535504 IGLC6P0CF74 106 aa15.01□□□□□ -0.01
SSPN-204ENST00000535504 A8MWL6 223 aa15□□□□□ -0.01
SSPN-204ENST00000535504 FAM231DQ6ZW35 169 aa15□□□□□ -0.01
SSPN-204ENST00000535504 C14orf178Q8N769 122 aaPredicted RBP15□□□□□ -0.01
SSPN-204ENST00000535504 BORCS7Q96B45 105 aa15□□□□□ -0.01
SSPN-204ENST00000535504 A0A087WWC5 75 aa14.99□□□□□ -0.01
SSPN-204ENST00000535504 LELP1Q5T871 98 aa14.99□□□□□ -0.01
SSPN-204ENST00000535504 LYZL1Q6UWQ5 148 aa14.99□□□□□ -0.01
SSPN-204ENST00000535504 Q6ZSN1 163 aa14.99□□□□□ -0.01
SSPN-204ENST00000535504 SMIM15Q7Z3B0 74 aa14.99□□□□□ -0.01
SSPN-204ENST00000535504 C10orf126Q8N4M7 172 aa14.99□□□□□ -0.01
SSPN-204ENST00000535504 C15orf54Q8N8G6 183 aa14.99□□□□□ -0.01
SSPN-204ENST00000535504 H7C1H1 209 aa14.98□□□□□ -0.01
SSPN-204ENST00000535504 MGPP08493 103 aa14.98□□□□□ -0.01
SSPN-204ENST00000535504 TMEM241Q24JQ0 296 aa14.98□□□□□ -0.01
SSPN-204ENST00000535504 WDR73Q6P4I2 378 aa14.98□□□□□ -0.01
SSPN-204ENST00000535504 LINC01551Q86U37 167 aa14.97□□□□□ -0.01
SSPN-204ENST00000535504 IGHV3-38A0A0C4DH36 116 aa14.96□□□□□ -0.01
SSPN-204ENST00000535504 RTL8CO15255 209 aa14.96□□□□□ -0.01
SSPN-204ENST00000535504 TWIST1Q15672 202 aa14.96□□□□□ -0.01
SSPN-204ENST00000535504 CT83Q5H943 113 aa14.96□□□□□ -0.01
SSPN-204ENST00000535504 WFDC10BQ8IUB3 73 aa14.96□□□□□ -0.01
SSPN-204ENST00000535504 TRBV7-3A0A075B6L6 115 aa14.95□□□□□ -0.02
SSPN-204ENST00000535504 CTRLP40313 264 aa14.95□□□□□ -0.02
SSPN-204ENST00000535504 NFE4Q86UQ8 179 aa14.95□□□□□ -0.02
SSPN-204ENST00000535504 DPH3P1Q9H4G8 78 aa14.95□□□□□ -0.02
SSPN-204ENST00000535504 NAT8Q9UHE5 227 aa14.95□□□□□ -0.02
SSPN-204ENST00000535504 DNAH10OSP0CZ25 163 aa14.94□□□□□ -0.02
SSPN-204ENST00000535504 NTF3P20783 257 aa14.94□□□□□ -0.02
SSPN-204ENST00000535504 KCNIP4Q6PIL6 250 aa14.94□□□□□ -0.02
SSPN-204ENST00000535504 ADIRFQ15847 76 aa14.93□□□□□ -0.02
SSPN-204ENST00000535504 OSTCQ9NRP0 149 aa14.93□□□□□ -0.02
SSPN-204ENST00000535504 URGCP-MRPS24S4R325 110 aa14.93□□□□□ -0.02
SSPN-204ENST00000535504 LINC00694P0DN24 101 aa14.92□□□□□ -0.02
SSPN-204ENST00000535504 OR10G8Q8NGN5 311 aa14.92□□□□□ -0.02
SSPN-204ENST00000535504 TNFRSF18Q9Y5U5 241 aa14.92□□□□□ -0.02
SSPN-204ENST00000535504 LINC01556Q5JQF7 62 aa14.91□□□□□ -0.02
SSPN-204ENST00000535504 GFRA4Q9GZZ7 299 aa14.91□□□□□ -0.02
SSPN-204ENST00000535504 LINC00315P59091 139 aa14.9□□□□□ -0.02
SSPN-204ENST00000535504 TMEM97Q5BJF2 176 aa14.9□□□□□ -0.02
SSPN-204ENST00000535504 TSKUQ8WUA8 353 aa14.9□□□□□ -0.02
SSPN-204ENST00000535504 PGLYRP4Q96LB8 373 aa14.9□□□□□ -0.02
SSPN-204ENST00000535504 CNFNQ9BYD5 112 aa14.9□□□□□ -0.02
SSPN-204ENST00000535504 KRTAP1-5Q9BYS1 174 aa14.9□□□□□ -0.02
SSPN-204ENST00000535504 MSRB1Q9NZV6 116 aa14.9□□□□□ -0.02
SSPN-204ENST00000535504 FAM231BA6NCW3 169 aa14.89□□□□□ -0.03
SSPN-204ENST00000535504 UBE2D3P61077 147 aa14.89□□□□□ -0.03
SSPN-204ENST00000535504 UBE2D2P62837 147 aa14.89□□□□□ -0.03
SSPN-204ENST00000535504 NEXN-AS1Q8NBZ9 246 aa14.89□□□□□ -0.03
SSPN-204ENST00000535504 DNAJC30Q96LL9 226 aa14.89□□□□□ -0.03
SSPN-204ENST00000535504 RPL23P62829 140 aaKnown RBP14.88□□□□□ -0.03
SSPN-204ENST00000535504 DAZ4Q86SG3 579 aaKnown RBP14.88□□□□□ -0.03
SSPN-204ENST00000535504 ISOC2Q96AB3 205 aa14.88□□□□□ -0.03
SSPN-204ENST00000535504 DAZ3Q9NR90 486 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms