RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 UBE2L5PA0A1B0GUS4 154 aa5.03□□□□□ -1.6
CLIP1-206ENST00000535290 F5H697 171 aa5.03□□□□□ -1.6
CLIP1-206ENST00000535290 RGS5O15539 181 aa5.03□□□□□ -1.6
CLIP1-206ENST00000535290 MBPP02686 304 aaPredicted RBP5.03□□□□□ -1.6
CLIP1-206ENST00000535290 UBE2D3P61077 147 aa5.03□□□□□ -1.6
CLIP1-206ENST00000535290 UBE2D2P62837 147 aa5.03□□□□□ -1.6
CLIP1-206ENST00000535290 BAXQ07812 192 aa5.03□□□□□ -1.6
CLIP1-206ENST00000535290 IL18Q14116 193 aa5.03□□□□□ -1.6
CLIP1-206ENST00000535290 A0A096LNI7 61 aa5.02□□□□□ -1.61
CLIP1-206ENST00000535290 TRIAP1O43715 76 aa5.02□□□□□ -1.61
CLIP1-206ENST00000535290 SCGB1D1O95968 90 aa5.02□□□□□ -1.61
CLIP1-206ENST00000535290 IFNA7P01567 189 aa5.02□□□□□ -1.61
CLIP1-206ENST00000535290 RBX1P62877 108 aa5.02□□□□□ -1.61
CLIP1-206ENST00000535290 IAH1Q2TAA2 248 aaPredicted RBP5.02□□□□□ -1.61
CLIP1-206ENST00000535290 GOLT1AQ6ZVE7 132 aa5.02□□□□□ -1.61
CLIP1-206ENST00000535290 MCFD2Q8NI22 146 aa5.02□□□□□ -1.61
CLIP1-206ENST00000535290 DIRAS2Q96HU8 199 aa5.02□□□□□ -1.61
CLIP1-206ENST00000535290 CHCHD5Q9BSY4 110 aa5.02□□□□□ -1.61
CLIP1-206ENST00000535290 NMES1Q9C002 83 aa5.02□□□□□ -1.61
CLIP1-206ENST00000535290 GSKIPQ9P0R6 139 aa5.02□□□□□ -1.61
CLIP1-206ENST00000535290 RABL2AQ9UBK7 228 aaPredicted RBP5.02□□□□□ -1.61
CLIP1-206ENST00000535290 TRBV7-3A0A075B6L6 115 aa5.01□□□□□ -1.61
CLIP1-206ENST00000535290 C9orf170A2RU37 121 aa5.01□□□□□ -1.61
CLIP1-206ENST00000535290 PTTG1O95997 202 aa5.01□□□□□ -1.61
CLIP1-206ENST00000535290 FGF7P21781 194 aa5.01□□□□□ -1.61
CLIP1-206ENST00000535290 RPS10P46783 165 aaKnown RBP5.01□□□□□ -1.61
CLIP1-206ENST00000535290 RAB5CP51148 216 aa5.01□□□□□ -1.61
CLIP1-206ENST00000535290 LINC00310P59036 64 aa5.01□□□□□ -1.61
CLIP1-206ENST00000535290 PIK3CD-AS1Q5SR53 167 aa5.01□□□□□ -1.61
CLIP1-206ENST00000535290 FAM74A4Q5TZK3 123 aa5.01□□□□□ -1.61
CLIP1-206ENST00000535290 SGK494Q96LW2 274 aa5.01□□□□□ -1.61
CLIP1-206ENST00000535290 SLIRPQ9GZT3 109 aaKnown RBP5.01□□□□□ -1.61
CLIP1-206ENST00000535290 NAA50Q9GZZ1 169 aaKnown RBP5.01□□□□□ -1.61
CLIP1-206ENST00000535290 GFRA4Q9GZZ7 299 aa5.01□□□□□ -1.61
CLIP1-206ENST00000535290 Q9H521 79 aa5.01□□□□□ -1.61
CLIP1-206ENST00000535290 OR7C2O60412 319 aa5□□□□□ -1.61
CLIP1-206ENST00000535290 BCAP31P51572 246 aa5□□□□□ -1.61
CLIP1-206ENST00000535290 S100A10P60903 97 aa5□□□□□ -1.61
CLIP1-206ENST00000535290 RPL36AP83881 106 aaKnown RBP5□□□□□ -1.61
CLIP1-206ENST00000535290 GAGE6Q13070 117 aa5□□□□□ -1.61
CLIP1-206ENST00000535290 CTF1Q16619 201 aa5□□□□□ -1.61
CLIP1-206ENST00000535290 SPANXN2Q5MJ10 180 aa5□□□□□ -1.61
CLIP1-206ENST00000535290 INO80EQ8NBZ0 244 aaPredicted RBP5□□□□□ -1.61
CLIP1-206ENST00000535290 RPL36ALQ969Q0 106 aaKnown RBP5□□□□□ -1.61
CLIP1-206ENST00000535290 SLC25A21Q9BQT8 299 aaPredicted RBP5□□□□□ -1.61
CLIP1-206ENST00000535290 NPCDR1Q9BY65 106 aa5□□□□□ -1.61
CLIP1-206ENST00000535290 IGKV3D-20A0A0C4DH25 116 aa4.99□□□□□ -1.61
CLIP1-206ENST00000535290 TRBV10-1A0A0K0K1A3 114 aa4.99□□□□□ -1.61
CLIP1-206ENST00000535290 KRTAP9-7A8MTY7 169 aa4.99□□□□□ -1.61
CLIP1-206ENST00000535290 L7N2F9 121 aa4.99□□□□□ -1.61
CLIP1-206ENST00000535290 RHODO00212 210 aa4.99□□□□□ -1.61
CLIP1-206ENST00000535290 GCGP01275 180 aa4.99□□□□□ -1.61
CLIP1-206ENST00000535290 GNG5P63218 68 aa4.99□□□□□ -1.61
CLIP1-206ENST00000535290 UBE2L3P68036 154 aaKnown RBP4.99□□□□□ -1.61
CLIP1-206ENST00000535290 REG3AQ06141 175 aa4.99□□□□□ -1.61
CLIP1-206ENST00000535290 NTM-AS1Q6ZSK4 140 aa4.99□□□□□ -1.61
CLIP1-206ENST00000535290 C15orf56Q8N910 161 aa4.99□□□□□ -1.61
CLIP1-206ENST00000535290 CMTM2Q8TAZ6 248 aa4.99□□□□□ -1.61
CLIP1-206ENST00000535290 C11orf1Q9H5F2 150 aa4.99□□□□□ -1.61
CLIP1-206ENST00000535290 OTORQ9NRC9 128 aa4.99□□□□□ -1.61
CLIP1-206ENST00000535290 EIF3GO75821 320 aaKnown RBP eCLIP4.98□□□□□ -1.61
CLIP1-206ENST00000535290 S100A4P26447 101 aaKnown RBP4.98□□□□□ -1.61
CLIP1-206ENST00000535290 S100A11P31949 105 aa4.98□□□□□ -1.61
CLIP1-206ENST00000535290 FAUP35544 74 aaKnown RBP4.98□□□□□ -1.61
CLIP1-206ENST00000535290 HIGD2BQ4VC39 106 aa4.98□□□□□ -1.61
CLIP1-206ENST00000535290 OR10G8Q8NGN5 311 aa4.98□□□□□ -1.61
CLIP1-206ENST00000535290 VCX3AQ9NNX9 186 aa4.98□□□□□ -1.61
CLIP1-206ENST00000535290 OR5AC2Q9NZP5 309 aa4.98□□□□□ -1.61
CLIP1-206ENST00000535290 LSM5Q9Y4Y9 91 aaKnown RBP4.98□□□□□ -1.61
CLIP1-206ENST00000535290 A0A087WXM4 84 aa4.97□□□□□ -1.61
CLIP1-206ENST00000535290 TRAV8-4A0A0B4J246 113 aa4.97□□□□□ -1.61
CLIP1-206ENST00000535290 IGSF23A1L1A6 192 aa4.97□□□□□ -1.61
CLIP1-206ENST00000535290 P01737 135 aa4.97□□□□□ -1.61
CLIP1-206ENST00000535290 PCP4P48539 62 aa4.97□□□□□ -1.61
CLIP1-206ENST00000535290 SULT1A1P50225 295 aa4.97□□□□□ -1.61
CLIP1-206ENST00000535290 PKIAP61925 76 aa4.97□□□□□ -1.61
CLIP1-206ENST00000535290 C20orf203Q8NBC4 194 aa4.97□□□□□ -1.61
CLIP1-206ENST00000535290 THAP6Q8TBB0 222 aa4.97□□□□□ -1.61
CLIP1-206ENST00000535290 LYRM2Q9NU23 88 aaPredicted RBP4.97□□□□□ -1.61
CLIP1-206ENST00000535290 RSL24D1Q9UHA3 163 aaKnown RBP4.97□□□□□ -1.61
CLIP1-206ENST00000535290 MUC17Q685J3 4493 aa4.97□□□□□ -1.61
CLIP1-206ENST00000535290 IGLV1-50A0A075B6I6 118 aa4.96□□□□□ -1.62
CLIP1-206ENST00000535290 H3BVH4 76 aa4.96□□□□□ -1.62
CLIP1-206ENST00000535290 KRTAP1-4P0C5Y4 121 aa4.96□□□□□ -1.62
CLIP1-206ENST00000535290 TMEM252Q8N6L7 170 aa4.96□□□□□ -1.62
CLIP1-206ENST00000535290 NEXN-AS1Q8NBZ9 246 aa4.96□□□□□ -1.62
CLIP1-206ENST00000535290 SFRP2Q96HF1 295 aa4.96□□□□□ -1.62
CLIP1-206ENST00000535290 NDFIP1Q9BT67 221 aa4.96□□□□□ -1.62
CLIP1-206ENST00000535290 IL36BQ9NZH7 164 aa4.96□□□□□ -1.62
CLIP1-206ENST00000535290 LINC00474Q9P2X8 69 aa4.96□□□□□ -1.62
CLIP1-206ENST00000535290 MBD2Q9UBB5 411 aa4.96□□□□□ -1.62
CLIP1-206ENST00000535290 FLVCR2Q9UPI3 526 aa4.96□□□□□ -1.62
CLIP1-206ENST00000535290 TSPAN13O95857 204 aa4.95□□□□□ -1.62
CLIP1-206ENST00000535290 MT-ND6P03923 174 aa4.95□□□□□ -1.62
CLIP1-206ENST00000535290 GZMBP10144 247 aa4.95□□□□□ -1.62
CLIP1-206ENST00000535290 LINC01547P58512 204 aaPredicted RBP4.95□□□□□ -1.62
CLIP1-206ENST00000535290 C1orf137Q5JT78 98 aa4.95□□□□□ -1.62
CLIP1-206ENST00000535290 TOMM5Q8N4H5 51 aa4.95□□□□□ -1.62
CLIP1-206ENST00000535290 FER1L6-AS1Q8NA97 138 aa4.95□□□□□ -1.62
CLIP1-206ENST00000535290 SUN5Q8TC36 379 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms