RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 UFSP1Q6NVU6 142 aa16.82■□□□□ 0.28
SIPA1-210ENST00000534406 DNAH6Q9C0G6 4158 aa16.82■□□□□ 0.28
SIPA1-210ENST00000534406 A0A087WWL8 130 aa16.81■□□□□ 0.28
SIPA1-210ENST00000534406 A8MWL6 223 aa16.81■□□□□ 0.28
SIPA1-210ENST00000534406 GYPEP15421 78 aa16.81■□□□□ 0.28
SIPA1-210ENST00000534406 RHOHQ15669 191 aa16.81■□□□□ 0.28
SIPA1-210ENST00000534406 LYZL1Q6UWQ5 148 aa16.81■□□□□ 0.28
SIPA1-210ENST00000534406 AP1S3Q96PC3 154 aa16.81■□□□□ 0.28
SIPA1-210ENST00000534406 RYR3Q15413 4870 aa16.81■□□□□ 0.28
SIPA1-210ENST00000534406 TRBV6-4A0A1B0GX49 114 aa16.8■□□□□ 0.28
SIPA1-210ENST00000534406 SSTP61278 116 aa16.8■□□□□ 0.28
SIPA1-210ENST00000534406 MRPL23Q16540 153 aaKnown RBP16.8■□□□□ 0.28
SIPA1-210ENST00000534406 UQCC3Q6UW78 93 aa16.8■□□□□ 0.28
SIPA1-210ENST00000534406 SLC25A29Q8N8R3 303 aa16.8■□□□□ 0.28
SIPA1-210ENST00000534406 PRADC1Q9BSG0 188 aa16.8■□□□□ 0.28
SIPA1-210ENST00000534406 HYDINQ4G0P3 5121 aa16.79■□□□□ 0.28
SIPA1-210ENST00000534406 CRYGDP07320 174 aa16.79■□□□□ 0.28
SIPA1-210ENST00000534406 CCL18P55774 89 aa16.79■□□□□ 0.28
SIPA1-210ENST00000534406 RNF212Q495C1 297 aa16.79■□□□□ 0.28
SIPA1-210ENST00000534406 K7EQD1 137 aa16.78■□□□□ 0.28
SIPA1-210ENST00000534406 SRIP30626 198 aa16.78■□□□□ 0.28
SIPA1-210ENST00000534406 COMMD7Q86VX2 200 aa16.78■□□□□ 0.28
SIPA1-210ENST00000534406 GTSF1Q8WW33 167 aa16.78■□□□□ 0.28
SIPA1-210ENST00000534406 Q6ZSN1 163 aa16.77■□□□□ 0.28
SIPA1-210ENST00000534406 TSKUQ8WUA8 353 aa16.77■□□□□ 0.28
SIPA1-210ENST00000534406 LOC100131303A0A0U1RQF7 123 aa16.76■□□□□ 0.27
SIPA1-210ENST00000534406 WDR73Q6P4I2 378 aa16.76■□□□□ 0.27
SIPA1-210ENST00000534406 OR10G8Q8NGN5 311 aa16.76■□□□□ 0.27
SIPA1-210ENST00000534406 CNFNQ9BYD5 112 aa16.76■□□□□ 0.27
SIPA1-210ENST00000534406 V9GYV3 84 aa16.76■□□□□ 0.27
SIPA1-210ENST00000534406 SMIM17P0DL12 118 aa16.75■□□□□ 0.27
SIPA1-210ENST00000534406 FAM3BP58499 235 aaPredicted RBP16.75■□□□□ 0.27
SIPA1-210ENST00000534406 NEGR1Q7Z3B1 354 aa16.75■□□□□ 0.27
SIPA1-210ENST00000534406 GFRA4Q9GZZ7 299 aa16.75■□□□□ 0.27
SIPA1-210ENST00000534406 TRGC1P0CF51 173 aa16.74■□□□□ 0.27
SIPA1-210ENST00000534406 ZNF56Q15929 161 aa16.74■□□□□ 0.27
SIPA1-210ENST00000534406 C14orf178Q8N769 122 aaPredicted RBP16.74■□□□□ 0.27
SIPA1-210ENST00000534406 MSRB1Q9NZV6 116 aa16.74■□□□□ 0.27
SIPA1-210ENST00000534406 LINC00588Q9Y4M8 146 aa16.74■□□□□ 0.27
SIPA1-210ENST00000534406 LINC00862A6NCI5 91 aa16.73■□□□□ 0.27
SIPA1-210ENST00000534406 FAM231BA6NCW3 169 aa16.73■□□□□ 0.27
SIPA1-210ENST00000534406 NTF3P20783 257 aa16.73■□□□□ 0.27
SIPA1-210ENST00000534406 PNRC1Q12796 327 aaPredicted RBP16.73■□□□□ 0.27
SIPA1-210ENST00000534406 ESRGQ1W209 222 aa16.73■□□□□ 0.27
SIPA1-210ENST00000534406 SH2D6Q7Z4S9 175 aa16.73■□□□□ 0.27
SIPA1-210ENST00000534406 PGLYRP4Q96LB8 373 aa16.73■□□□□ 0.27
SIPA1-210ENST00000534406 KMT2AQ03164 3969 aa16.72■□□□□ 0.27
SIPA1-210ENST00000534406 HIGD1CA8MV81 97 aa16.72■□□□□ 0.27
SIPA1-210ENST00000534406 BORCS7Q96B45 105 aa16.72■□□□□ 0.27
SIPA1-210ENST00000534406 FOXA3P55318 350 aaPredicted RBP16.71■□□□□ 0.27
SIPA1-210ENST00000534406 RAB4BP61018 213 aa16.71■□□□□ 0.27
SIPA1-210ENST00000534406 TWIST1Q15672 202 aa16.71■□□□□ 0.27
SIPA1-210ENST00000534406 MRPS16Q9Y3D3 137 aaKnown RBP16.71■□□□□ 0.27
SIPA1-210ENST00000534406 KIF25-AS1Q9Y6Z4 181 aa16.71■□□□□ 0.27
SIPA1-210ENST00000534406 TMEM218A2RU14 115 aa16.7■□□□□ 0.26
SIPA1-210ENST00000534406 F5H697 171 aa16.69■□□□□ 0.26
SIPA1-210ENST00000534406 MGPP08493 103 aa16.69■□□□□ 0.26
SIPA1-210ENST00000534406 TRBV10-1A0A0K0K1A3 114 aa16.68■□□□□ 0.26
SIPA1-210ENST00000534406 ADCYAP1P18509 176 aa16.68■□□□□ 0.26
SIPA1-210ENST00000534406 EVI2AP22794 236 aa16.68■□□□□ 0.26
SIPA1-210ENST00000534406 DPH3P1Q9H4G8 78 aa16.68■□□□□ 0.26
SIPA1-210ENST00000534406 GAGE12JA6NER3 117 aa16.67■□□□□ 0.26
SIPA1-210ENST00000534406 F8W036 122 aa16.67■□□□□ 0.26
SIPA1-210ENST00000534406 LINC00694P0DN24 101 aa16.67■□□□□ 0.26
SIPA1-210ENST00000534406 LINC00315P59091 139 aa16.67■□□□□ 0.26
SIPA1-210ENST00000534406 GAGE1Q13065 139 aa16.67■□□□□ 0.26
SIPA1-210ENST00000534406 GAGE4Q13068 117 aa16.67■□□□□ 0.26
SIPA1-210ENST00000534406 GAGE5Q13069 117 aa16.67■□□□□ 0.26
SIPA1-210ENST00000534406 GAGE13Q4V321 117 aa16.67■□□□□ 0.26
SIPA1-210ENST00000534406 LYPD5Q6UWN5 251 aa16.67■□□□□ 0.26
SIPA1-210ENST00000534406 ZNRF2Q8NHG8 242 aa16.67■□□□□ 0.26
SIPA1-210ENST00000534406 UPK3BQ9BT76 320 aa16.67■□□□□ 0.26
SIPA1-210ENST00000534406 A0A1B0GUT8 65 aa16.66■□□□□ 0.26
SIPA1-210ENST00000534406 SMIM15Q7Z3B0 74 aa16.66■□□□□ 0.26
SIPA1-210ENST00000534406 NAT8BQ9UHF3 227 aa16.66■□□□□ 0.26
SIPA1-210ENST00000534406 SMIM27A0A1W2PRY6 76 aa16.65■□□□□ 0.26
SIPA1-210ENST00000534406 PPP1R2P9O14990 202 aa16.65■□□□□ 0.26
SIPA1-210ENST00000534406 NUP35Q8NFH5 326 aa16.65■□□□□ 0.26
SIPA1-210ENST00000534406 ATP6V0E2Q8NHE4 81 aa16.65■□□□□ 0.26
SIPA1-210ENST00000534406 Q9UF83 564 aa16.65■□□□□ 0.26
SIPA1-210ENST00000534406 TIRAPP58753 221 aa16.64■□□□□ 0.25
SIPA1-210ENST00000534406 RPL36AP83881 106 aaKnown RBP16.64■□□□□ 0.25
SIPA1-210ENST00000534406 RPL36ALQ969Q0 106 aaKnown RBP16.64■□□□□ 0.25
SIPA1-210ENST00000534406 IGLV2-18A0A075B6J9 118 aa16.63■□□□□ 0.25
SIPA1-210ENST00000534406 MT-ND4LP03901 98 aa16.63■□□□□ 0.25
SIPA1-210ENST00000534406 SEC11CQ9BY50 192 aa16.63■□□□□ 0.25
SIPA1-210ENST00000534406 H7C1H1 209 aa16.62■□□□□ 0.25
SIPA1-210ENST00000534406 SUMO4Q6EEV6 95 aa16.62■□□□□ 0.25
SIPA1-210ENST00000534406 RIGQ13278 110 aa16.61■□□□□ 0.25
SIPA1-210ENST00000534406 NEXN-AS1Q8NBZ9 246 aa16.61■□□□□ 0.25
SIPA1-210ENST00000534406 GTSF1LQ9H1H1 148 aa16.61■□□□□ 0.25
SIPA1-210ENST00000534406 TRBV7-3A0A075B6L6 115 aa16.6■□□□□ 0.25
SIPA1-210ENST00000534406 ANAPC16Q96DE5 110 aa16.6■□□□□ 0.25
SIPA1-210ENST00000534406 Q9H8V8 135 aa16.6■□□□□ 0.25
SIPA1-210ENST00000534406 M0QY20 66 aa16.58■□□□□ 0.24
SIPA1-210ENST00000534406 M0R2N4 97 aa16.58■□□□□ 0.24
SIPA1-210ENST00000534406 UBE2D3P61077 147 aa16.58■□□□□ 0.24
SIPA1-210ENST00000534406 UBE2D2P62837 147 aa16.58■□□□□ 0.24
SIPA1-210ENST00000534406 SIVA1O15304 175 aa16.57■□□□□ 0.24
SIPA1-210ENST00000534406 NBDYA0A0U1RRE5 68 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms