RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 MED14OSP0DP75 135 aa9.17□□□□□ -0.94
CMTM1-219ENST00000533953 PIK3CD-AS1Q5SR53 167 aa9.17□□□□□ -0.94
CMTM1-219ENST00000533953 SPANXN1Q5VSR9 72 aa9.17□□□□□ -0.94
CMTM1-219ENST00000533953 ZFP2Q6ZN57 461 aa9.17□□□□□ -0.94
CMTM1-219ENST00000533953 SMIM12Q96EX1 92 aa9.17□□□□□ -0.94
CMTM1-219ENST00000533953 PRADC1Q9BSG0 188 aa9.17□□□□□ -0.94
CMTM1-219ENST00000533953 UPK3BQ9BT76 320 aa9.17□□□□□ -0.94
CMTM1-219ENST00000533953 CIDEAO60543 219 aa9.16□□□□□ -0.94
CMTM1-219ENST00000533953 OR5AL1P0C617 328 aa9.16□□□□□ -0.94
CMTM1-219ENST00000533953 IGLC6P0CF74 106 aa9.16□□□□□ -0.94
CMTM1-219ENST00000533953 RHOHQ15669 191 aa9.16□□□□□ -0.94
CMTM1-219ENST00000533953 WFDC10BQ8IUB3 73 aa9.16□□□□□ -0.94
CMTM1-219ENST00000533953 FER1L6-AS1Q8NA97 138 aa9.16□□□□□ -0.94
CMTM1-219ENST00000533953 SMIM7Q9BQ49 75 aa9.16□□□□□ -0.94
CMTM1-219ENST00000533953 DNAH2Q9P225 4427 aa9.16□□□□□ -0.94
CMTM1-219ENST00000533953 ZNF727A8MUV8 499 aa9.15□□□□□ -0.94
CMTM1-219ENST00000533953 RPS20P60866 119 aaKnown RBP9.15□□□□□ -0.94
CMTM1-219ENST00000533953 LYZL1Q6UWQ5 148 aa9.15□□□□□ -0.94
CMTM1-219ENST00000533953 TNFRSF18Q9Y5U5 241 aa9.15□□□□□ -0.94
CMTM1-219ENST00000533953 SIVA1O15304 175 aa9.14□□□□□ -0.95
CMTM1-219ENST00000533953 C1orf134Q5TEV5 83 aa9.14□□□□□ -0.95
CMTM1-219ENST00000533953 ATP6V0E2Q8NHE4 81 aa9.14□□□□□ -0.95
CMTM1-219ENST00000533953 RPP21Q9H633 154 aaKnown RBP9.14□□□□□ -0.95
CMTM1-219ENST00000533953 BIN3Q9NQY0 253 aa9.14□□□□□ -0.95
CMTM1-219ENST00000533953 RHODO00212 210 aa9.13□□□□□ -0.95
CMTM1-219ENST00000533953 GATCO43716 136 aaKnown RBP9.13□□□□□ -0.95
CMTM1-219ENST00000533953 LINC01551Q86U37 167 aa9.13□□□□□ -0.95
CMTM1-219ENST00000533953 KIF25-AS1Q9Y6Z4 181 aa9.13□□□□□ -0.95
CMTM1-219ENST00000533953 PRSS29PA6NIE9 313 aa9.12□□□□□ -0.95
CMTM1-219ENST00000533953 F5H697 171 aa9.12□□□□□ -0.95
CMTM1-219ENST00000533953 LINC00315P59091 139 aa9.12□□□□□ -0.95
CMTM1-219ENST00000533953 ZNF56Q15929 161 aa9.12□□□□□ -0.95
CMTM1-219ENST00000533953 GTSF1Q8WW33 167 aa9.12□□□□□ -0.95
CMTM1-219ENST00000533953 DNAH17Q9UFH2 4485 aa9.12□□□□□ -0.95
CMTM1-219ENST00000533953 XKRY2A2RUG3 117 aa9.11□□□□□ -0.95
CMTM1-219ENST00000533953 LINC00694P0DN24 101 aa9.11□□□□□ -0.95
CMTM1-219ENST00000533953 NTF3P20783 257 aa9.11□□□□□ -0.95
CMTM1-219ENST00000533953 ERVFC1-1P60608 527 aa9.11□□□□□ -0.95
CMTM1-219ENST00000533953 IFITM2Q01629 132 aa9.11□□□□□ -0.95
CMTM1-219ENST00000533953 PEA15Q15121 130 aa9.11□□□□□ -0.95
CMTM1-219ENST00000533953 C6orf223Q8N319 242 aa9.11□□□□□ -0.95
CMTM1-219ENST00000533953 MGPP08493 103 aa9.1□□□□□ -0.95
CMTM1-219ENST00000533953 EVI2AP22794 236 aa9.1□□□□□ -0.95
CMTM1-219ENST00000533953 FOXA3P55318 350 aaPredicted RBP9.1□□□□□ -0.95
CMTM1-219ENST00000533953 RAB4BP61018 213 aa9.1□□□□□ -0.95
CMTM1-219ENST00000533953 TNP2Q05952 138 aa9.1□□□□□ -0.95
CMTM1-219ENST00000533953 TMEM241Q24JQ0 296 aa9.1□□□□□ -0.95
CMTM1-219ENST00000533953 SH2D6Q7Z4S9 175 aa9.1□□□□□ -0.95
CMTM1-219ENST00000533953 Q8N3U1 123 aa9.1□□□□□ -0.95
CMTM1-219ENST00000533953 PGLYRP4Q96LB8 373 aa9.1□□□□□ -0.95
CMTM1-219ENST00000533953 GTSF1LQ9H1H1 148 aa9.1□□□□□ -0.95
CMTM1-219ENST00000533953 LY96Q9Y6Y9 160 aa9.1□□□□□ -0.95
CMTM1-219ENST00000533953 FRAS1Q86XX4 4008 aa9.09□□□□□ -0.95
CMTM1-219ENST00000533953 IGHV3-38A0A0C4DH36 116 aa9.09□□□□□ -0.95
CMTM1-219ENST00000533953 F2Z2F3 143 aa9.09□□□□□ -0.95
CMTM1-219ENST00000533953 NDUFS6O75380 124 aaKnown RBP9.09□□□□□ -0.95
CMTM1-219ENST00000533953 RPL23P62829 140 aaKnown RBP9.09□□□□□ -0.95
CMTM1-219ENST00000533953 CACNG7P62955 275 aa9.09□□□□□ -0.95
CMTM1-219ENST00000533953 OR10J3Q5JRS4 329 aa9.09□□□□□ -0.95
CMTM1-219ENST00000533953 FAM231DQ6ZW35 169 aa9.09□□□□□ -0.95
CMTM1-219ENST00000533953 BIRC6Q9NR09 4857 aa9.08□□□□□ -0.96
CMTM1-219ENST00000533953 A0A1B0GVY2 172 aa9.08□□□□□ -0.96
CMTM1-219ENST00000533953 A0A1W2PPQ1 181 aa9.08□□□□□ -0.96
CMTM1-219ENST00000533953 IGHV3-30P01768 117 aa9.08□□□□□ -0.96
CMTM1-219ENST00000533953 IGHV3-33P01772 117 aa9.08□□□□□ -0.96
CMTM1-219ENST00000533953 SMIM17P0DL12 118 aa9.08□□□□□ -0.96
CMTM1-219ENST00000533953 IGHV3-30-3P0DP02 117 aa9.08□□□□□ -0.96
CMTM1-219ENST00000533953 IGHV3-30-5P0DP03 117 aa9.08□□□□□ -0.96
CMTM1-219ENST00000533953 CTRLP40313 264 aa9.08□□□□□ -0.96
CMTM1-219ENST00000533953 TIRAPP58753 221 aa9.08□□□□□ -0.96
CMTM1-219ENST00000533953 TWIST1Q15672 202 aa9.08□□□□□ -0.96
CMTM1-219ENST00000533953 ADIRFQ15847 76 aa9.08□□□□□ -0.96
CMTM1-219ENST00000533953 TTC32Q5I0X7 151 aa9.08□□□□□ -0.96
CMTM1-219ENST00000533953 SOHLH1Q5JUK2 328 aa9.08□□□□□ -0.96
CMTM1-219ENST00000533953 LELP1Q5T871 98 aa9.08□□□□□ -0.96
CMTM1-219ENST00000533953 LINC00336Q6ZUF6 198 aa9.08□□□□□ -0.96
CMTM1-219ENST00000533953 NEXN-AS1Q8NBZ9 246 aa9.08□□□□□ -0.96
CMTM1-219ENST00000533953 AP1S3Q96PC3 154 aa9.08□□□□□ -0.96
CMTM1-219ENST00000533953 FAT2Q9NYQ8 4349 aa9.07□□□□□ -0.96
CMTM1-219ENST00000533953 DNAH10OSP0CZ25 163 aa9.07□□□□□ -0.96
CMTM1-219ENST00000533953 UBE2D3P61077 147 aa9.07□□□□□ -0.96
CMTM1-219ENST00000533953 RAB14P61106 215 aa9.07□□□□□ -0.96
CMTM1-219ENST00000533953 UBE2D2P62837 147 aa9.07□□□□□ -0.96
CMTM1-219ENST00000533953 DEFB104AQ8WTQ1 72 aa9.07□□□□□ -0.96
CMTM1-219ENST00000533953 ISOC2Q96AB3 205 aa9.07□□□□□ -0.96
CMTM1-219ENST00000533953 TRAV8-6A0A0B4J262 113 aa9.06□□□□□ -0.96
CMTM1-219ENST00000533953 A8MWL6 223 aa9.06□□□□□ -0.96
CMTM1-219ENST00000533953 RPL36AP83881 106 aaKnown RBP9.06□□□□□ -0.96
CMTM1-219ENST00000533953 FAM74A3Q4VXF1 159 aa9.06□□□□□ -0.96
CMTM1-219ENST00000533953 SUMO4Q6EEV6 95 aa9.06□□□□□ -0.96
CMTM1-219ENST00000533953 RPL36ALQ969Q0 106 aaKnown RBP9.06□□□□□ -0.96
CMTM1-219ENST00000533953 OSTCQ9NRP0 149 aa9.06□□□□□ -0.96
CMTM1-219ENST00000533953 NAT8Q9UHE5 227 aa9.06□□□□□ -0.96
CMTM1-219ENST00000533953 V9GYV3 84 aa9.06□□□□□ -0.96
CMTM1-219ENST00000533953 TRBV7-3A0A075B6L6 115 aa9.05□□□□□ -0.96
CMTM1-219ENST00000533953 TRBV10-1A0A0K0K1A3 114 aa9.05□□□□□ -0.96
CMTM1-219ENST00000533953 M0QY20 66 aa9.05□□□□□ -0.96
CMTM1-219ENST00000533953 WDR73Q6P4I2 378 aa9.05□□□□□ -0.96
CMTM1-219ENST00000533953 TRAV26-2A0A0B4J265 109 aa9.04□□□□□ -0.96
CMTM1-219ENST00000533953 TRGC1P0CF51 173 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms