RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 LYPD6BQ8NI32 183 aa9.19□□□□□ -0.94
CAPN1-227ENST00000533909 SAMD10Q9BYL1 202 aa9.19□□□□□ -0.94
CAPN1-227ENST00000533909 LY96Q9Y6Y9 160 aa9.19□□□□□ -0.94
CAPN1-227ENST00000533909 TRBV20OR9-2A0A075B6H5 130 aa9.18□□□□□ -0.94
CAPN1-227ENST00000533909 OR5AL1P0C617 328 aa9.18□□□□□ -0.94
CAPN1-227ENST00000533909 GZMBP10144 247 aa9.18□□□□□ -0.94
CAPN1-227ENST00000533909 EVI2AP22794 236 aa9.18□□□□□ -0.94
CAPN1-227ENST00000533909 ZNF56Q15929 161 aa9.18□□□□□ -0.94
CAPN1-227ENST00000533909 OR10J3Q5JRS4 329 aa9.18□□□□□ -0.94
CAPN1-227ENST00000533909 Q6ZSN1 163 aa9.18□□□□□ -0.94
CAPN1-227ENST00000533909 FER1L6-AS1Q8NA97 138 aa9.18□□□□□ -0.94
CAPN1-227ENST00000533909 ATP6V0E2Q8NHE4 81 aa9.18□□□□□ -0.94
CAPN1-227ENST00000533909 DNAH10Q8IVF4 4471 aa9.17□□□□□ -0.94
CAPN1-227ENST00000533909 C19orf71A6NCJ1 209 aa9.17□□□□□ -0.94
CAPN1-227ENST00000533909 SNAI2O43623 268 aa9.17□□□□□ -0.94
CAPN1-227ENST00000533909 TIRAPP58753 221 aa9.17□□□□□ -0.94
CAPN1-227ENST00000533909 ZNF575Q86XF7 245 aa9.17□□□□□ -0.94
CAPN1-227ENST00000533909 C14orf178Q8N769 122 aaPredicted RBP9.17□□□□□ -0.94
CAPN1-227ENST00000533909 AP1S3Q96PC3 154 aa9.17□□□□□ -0.94
CAPN1-227ENST00000533909 GTSF1LQ9H1H1 148 aa9.17□□□□□ -0.94
CAPN1-227ENST00000533909 F5H697 171 aa9.16□□□□□ -0.94
CAPN1-227ENST00000533909 UFSP1Q6NVU6 142 aa9.16□□□□□ -0.94
CAPN1-227ENST00000533909 TEX261Q6UWH6 196 aa9.16□□□□□ -0.94
CAPN1-227ENST00000533909 WFDC10BQ8IUB3 73 aa9.16□□□□□ -0.94
CAPN1-227ENST00000533909 FAM210AQ96ND0 272 aa9.16□□□□□ -0.94
CAPN1-227ENST00000533909 SMIM7Q9BQ49 75 aa9.16□□□□□ -0.94
CAPN1-227ENST00000533909 SSBP4Q9BWG4 385 aaPredicted RBP9.16□□□□□ -0.94
CAPN1-227ENST00000533909 FRAS1Q86XX4 4008 aa9.15□□□□□ -0.94
CAPN1-227ENST00000533909 F2Z2F3 143 aa9.15□□□□□ -0.94
CAPN1-227ENST00000533909 CRYGDP07320 174 aa9.15□□□□□ -0.94
CAPN1-227ENST00000533909 BTF3P20290 206 aaKnown RBP9.15□□□□□ -0.94
CAPN1-227ENST00000533909 CACNG7P62955 275 aa9.15□□□□□ -0.94
CAPN1-227ENST00000533909 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.15□□□□□ -0.94
CAPN1-227ENST00000533909 NUDT10Q8NFP7 164 aa9.15□□□□□ -0.94
CAPN1-227ENST00000533909 OCC1Q8TAD7 63 aa9.15□□□□□ -0.94
CAPN1-227ENST00000533909 NUDT11Q96G61 164 aa9.15□□□□□ -0.94
CAPN1-227ENST00000533909 KRTAP1-5Q9BYS1 174 aa9.15□□□□□ -0.94
CAPN1-227ENST00000533909 RPP21Q9H633 154 aaKnown RBP9.15□□□□□ -0.94
CAPN1-227ENST00000533909 IGHV3-38A0A0C4DH36 116 aa9.14□□□□□ -0.95
CAPN1-227ENST00000533909 TRBV10-1A0A0K0K1A3 114 aa9.14□□□□□ -0.95
CAPN1-227ENST00000533909 ZNF727A8MUV8 499 aa9.14□□□□□ -0.95
CAPN1-227ENST00000533909 K7EP13 123 aa9.14□□□□□ -0.95
CAPN1-227ENST00000533909 RAB4BP61018 213 aa9.14□□□□□ -0.95
CAPN1-227ENST00000533909 RPL36AP83881 106 aaKnown RBP9.14□□□□□ -0.95
CAPN1-227ENST00000533909 LELP1Q5T871 98 aa9.14□□□□□ -0.95
CAPN1-227ENST00000533909 C10orf126Q8N4M7 172 aa9.14□□□□□ -0.95
CAPN1-227ENST00000533909 RPL36ALQ969Q0 106 aaKnown RBP9.14□□□□□ -0.95
CAPN1-227ENST00000533909 RNASE7Q9H1E1 156 aaKnown RBP9.14□□□□□ -0.95
CAPN1-227ENST00000533909 A0A087WWC5 75 aa9.13□□□□□ -0.95
CAPN1-227ENST00000533909 K7EN84 100 aa9.13□□□□□ -0.95
CAPN1-227ENST00000533909 GATCO43716 136 aaKnown RBP9.13□□□□□ -0.95
CAPN1-227ENST00000533909 IGLC6P0CF74 106 aa9.13□□□□□ -0.95
CAPN1-227ENST00000533909 DNAH10OSP0CZ25 163 aa9.13□□□□□ -0.95
CAPN1-227ENST00000533909 LINC00315P59091 139 aa9.13□□□□□ -0.95
CAPN1-227ENST00000533909 ERVFC1-1P60608 527 aa9.13□□□□□ -0.95
CAPN1-227ENST00000533909 NFE4Q86UQ8 179 aa9.13□□□□□ -0.95
CAPN1-227ENST00000533909 NDUFS6O75380 124 aaKnown RBP9.12□□□□□ -0.95
CAPN1-227ENST00000533909 MGPP08493 103 aa9.12□□□□□ -0.95
CAPN1-227ENST00000533909 TRGC1P0CF51 173 aa9.12□□□□□ -0.95
CAPN1-227ENST00000533909 LYZL1Q6UWQ5 148 aa9.12□□□□□ -0.95
CAPN1-227ENST00000533909 TRBV7-3A0A075B6L6 115 aa9.11□□□□□ -0.95
CAPN1-227ENST00000533909 SRP19P09132 144 aaKnown RBP9.11□□□□□ -0.95
CAPN1-227ENST00000533909 TNP2Q05952 138 aa9.11□□□□□ -0.95
CAPN1-227ENST00000533909 PEA15Q15121 130 aa9.11□□□□□ -0.95
CAPN1-227ENST00000533909 TWIST1Q15672 202 aa9.11□□□□□ -0.95
CAPN1-227ENST00000533909 MSRB1Q9NZV6 116 aa9.11□□□□□ -0.95
CAPN1-227ENST00000533909 URGCP-MRPS24S4R325 110 aa9.11□□□□□ -0.95
CAPN1-227ENST00000533909 BIRC6Q9NR09 4857 aa9.11□□□□□ -0.95
CAPN1-227ENST00000533909 HECTD4Q9Y4D8 3996 aa9.1□□□□□ -0.95
CAPN1-227ENST00000533909 DNAH2Q9P225 4427 aa9.1□□□□□ -0.95
CAPN1-227ENST00000533909 H7C1H1 209 aa9.1□□□□□ -0.95
CAPN1-227ENST00000533909 IGHV3-30P01768 117 aa9.1□□□□□ -0.95
CAPN1-227ENST00000533909 IGHV3-33P01772 117 aa9.1□□□□□ -0.95
CAPN1-227ENST00000533909 LINC00694P0DN24 101 aa9.1□□□□□ -0.95
CAPN1-227ENST00000533909 IGHV3-30-3P0DP02 117 aa9.1□□□□□ -0.95
CAPN1-227ENST00000533909 IGHV3-30-5P0DP03 117 aa9.1□□□□□ -0.95
CAPN1-227ENST00000533909 RAB14P61106 215 aa9.1□□□□□ -0.95
CAPN1-227ENST00000533909 LINC01556Q5JQF7 62 aa9.1□□□□□ -0.95
CAPN1-227ENST00000533909 KCNIP4Q6PIL6 250 aa9.1□□□□□ -0.95
CAPN1-227ENST00000533909 FAM231DQ6ZW35 169 aa9.1□□□□□ -0.95
CAPN1-227ENST00000533909 SMIM15Q7Z3B0 74 aa9.1□□□□□ -0.95
CAPN1-227ENST00000533909 BORCS7Q96B45 105 aa9.1□□□□□ -0.95
CAPN1-227ENST00000533909 Q9UF83 564 aa9.1□□□□□ -0.95
CAPN1-227ENST00000533909 A0A1B0GVY2 172 aa9.09□□□□□ -0.95
CAPN1-227ENST00000533909 A8MWL6 223 aa9.09□□□□□ -0.95
CAPN1-227ENST00000533909 EREGO14944 169 aa9.09□□□□□ -0.95
CAPN1-227ENST00000533909 NTF3P20783 257 aa9.09□□□□□ -0.95
CAPN1-227ENST00000533909 CTRLP40313 264 aa9.09□□□□□ -0.95
CAPN1-227ENST00000533909 FAM74A3Q4VXF1 159 aa9.09□□□□□ -0.95
CAPN1-227ENST00000533909 WDR73Q6P4I2 378 aa9.09□□□□□ -0.95
CAPN1-227ENST00000533909 LINC01551Q86U37 167 aa9.09□□□□□ -0.95
CAPN1-227ENST00000533909 UBE2D3P61077 147 aa9.08□□□□□ -0.96
CAPN1-227ENST00000533909 UBE2D2P62837 147 aa9.08□□□□□ -0.96
CAPN1-227ENST00000533909 TMEM241Q24JQ0 296 aa9.08□□□□□ -0.96
CAPN1-227ENST00000533909 C15orf54Q8N8G6 183 aa9.08□□□□□ -0.96
CAPN1-227ENST00000533909 OR10G8Q8NGN5 311 aa9.08□□□□□ -0.96
CAPN1-227ENST00000533909 DPH3P1Q9H4G8 78 aa9.08□□□□□ -0.96
CAPN1-227ENST00000533909 TNFRSF18Q9Y5U5 241 aa9.08□□□□□ -0.96
CAPN1-227ENST00000533909 PSCAO43653 123 aa9.07□□□□□ -0.96
CAPN1-227ENST00000533909 CT83Q5H943 113 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms