RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 ALG5Q9Y673 324 aa11.75□□□□□ -0.53
UBXN1-216ENST00000533908 IFNA7P01567 189 aa11.74□□□□□ -0.53
UBXN1-216ENST00000533908 DEFA1P59665 94 aa11.74□□□□□ -0.53
UBXN1-216ENST00000533908 DEFA3P59666 94 aa11.74□□□□□ -0.53
UBXN1-216ENST00000533908 UBE2G2P60604 165 aa11.74□□□□□ -0.53
UBXN1-216ENST00000533908 FAM74A4Q5TZK3 123 aa11.74□□□□□ -0.53
UBXN1-216ENST00000533908 ATRAIDQ6UW56 229 aa11.74□□□□□ -0.53
UBXN1-216ENST00000533908 Q86TA4 180 aa11.74□□□□□ -0.53
UBXN1-216ENST00000533908 RMI2Q96E14 147 aa11.74□□□□□ -0.53
UBXN1-216ENST00000533908 SFRP2Q96HF1 295 aa11.74□□□□□ -0.53
UBXN1-216ENST00000533908 URGCP-MRPS24S4R325 110 aa11.74□□□□□ -0.53
UBXN1-216ENST00000533908 FAT3Q8TDW7 4589 aa11.74□□□□□ -0.53
UBXN1-216ENST00000533908 PEX7O00628 323 aa11.73□□□□□ -0.53
UBXN1-216ENST00000533908 SH2D1AO60880 128 aa11.73□□□□□ -0.53
UBXN1-216ENST00000533908 RHODO00212 210 aa11.72□□□□□ -0.53
UBXN1-216ENST00000533908 SERTAD4-AS1Q5TG53 156 aa11.72□□□□□ -0.53
UBXN1-216ENST00000533908 RPL7L1Q6DKI1 246 aaKnown RBP11.72□□□□□ -0.53
UBXN1-216ENST00000533908 COX8CQ7Z4L0 72 aa11.72□□□□□ -0.53
UBXN1-216ENST00000533908 SYT8Q8NBV8 401 aa11.72□□□□□ -0.53
UBXN1-216ENST00000533908 OR11H4Q8NGC9 324 aa11.72□□□□□ -0.53
UBXN1-216ENST00000533908 FAM74A7A6NL05 159 aa11.71□□□□□ -0.53
UBXN1-216ENST00000533908 ENHOQ6UWT2 76 aa11.71□□□□□ -0.53
UBXN1-216ENST00000533908 A0A087WX48 190 aa11.7□□□□□ -0.54
UBXN1-216ENST00000533908 TMSB15BA0A087X1C1 80 aa11.7□□□□□ -0.54
UBXN1-216ENST00000533908 M0R381 172 aa11.7□□□□□ -0.54
UBXN1-216ENST00000533908 OXTP01178 125 aa11.7□□□□□ -0.54
UBXN1-216ENST00000533908 UBE2D3P61077 147 aa11.7□□□□□ -0.54
UBXN1-216ENST00000533908 UBE2D2P62837 147 aa11.7□□□□□ -0.54
UBXN1-216ENST00000533908 CTXND1A0A1B0GTU2 59 aa11.69□□□□□ -0.54
UBXN1-216ENST00000533908 HIST1H2BAQ96A08 127 aa11.69□□□□□ -0.54
UBXN1-216ENST00000533908 CHCHD7Q9BUK0 85 aa11.69□□□□□ -0.54
UBXN1-216ENST00000533908 PHLDA3Q9Y5J5 127 aa11.69□□□□□ -0.54
UBXN1-216ENST00000533908 UBR4Q5T4S7 5183 aa11.68□□□□□ -0.54
UBXN1-216ENST00000533908 IGLV2-8P01709 118 aa11.68□□□□□ -0.54
UBXN1-216ENST00000533908 SEC11BP0C7V7 166 aa11.68□□□□□ -0.54
UBXN1-216ENST00000533908 HNRNPA3P51991 378 aaKnown RBP11.68□□□□□ -0.54
UBXN1-216ENST00000533908 ELOBQ15370 118 aa11.68□□□□□ -0.54
UBXN1-216ENST00000533908 ZNF674Q2M3X9 581 aa11.68□□□□□ -0.54
UBXN1-216ENST00000533908 ZFP30Q9Y2G7 519 aa11.68□□□□□ -0.54
UBXN1-216ENST00000533908 TRBV7-3A0A075B6L6 115 aa11.67□□□□□ -0.54
UBXN1-216ENST00000533908 TRBV10-1A0A0K0K1A3 114 aa11.67□□□□□ -0.54
UBXN1-216ENST00000533908 TPT1P13693 172 aaKnown RBP11.67□□□□□ -0.54
UBXN1-216ENST00000533908 RPL36AP83881 106 aaKnown RBP11.67□□□□□ -0.54
UBXN1-216ENST00000533908 LINC01559Q495D7 138 aa11.67□□□□□ -0.54
UBXN1-216ENST00000533908 FAM162BQ5T6X4 162 aa11.67□□□□□ -0.54
UBXN1-216ENST00000533908 RPL36ALQ969Q0 106 aaKnown RBP11.67□□□□□ -0.54
UBXN1-216ENST00000533908 TRBV6-8A0A0A6YYG3 113 aa11.66□□□□□ -0.54
UBXN1-216ENST00000533908 TMEM262E9PQX1 116 aa11.66□□□□□ -0.54
UBXN1-216ENST00000533908 Q0VG73 95 aa11.66□□□□□ -0.54
UBXN1-216ENST00000533908 OR10G8Q8NGN5 311 aa11.66□□□□□ -0.54
UBXN1-216ENST00000533908 DAZAP1Q96EP5 407 aaKnown RBP11.66□□□□□ -0.54
UBXN1-216ENST00000533908 MED28Q9H204 178 aa11.66□□□□□ -0.54
UBXN1-216ENST00000533908 MPV17L2Q567V2 206 aa11.65□□□□□ -0.54
UBXN1-216ENST00000533908 C15orf54Q8N8G6 183 aa11.65□□□□□ -0.54
UBXN1-216ENST00000533908 C1orf43Q9BWL3 253 aa11.65□□□□□ -0.54
UBXN1-216ENST00000533908 NKX6-2Q9C056 277 aaPredicted RBP11.65□□□□□ -0.54
UBXN1-216ENST00000533908 LTAP01374 205 aa11.64□□□□□ -0.55
UBXN1-216ENST00000533908 PRR27Q6MZM9 219 aa11.64□□□□□ -0.55
UBXN1-216ENST00000533908 ZFP82Q8N141 532 aa11.64□□□□□ -0.55
UBXN1-216ENST00000533908 NEXN-AS1Q8NBZ9 246 aa11.64□□□□□ -0.55
UBXN1-216ENST00000533908 FMC1Q96HJ9 113 aa11.64□□□□□ -0.55
UBXN1-216ENST00000533908 PKHD1L1Q86WI1 4243 aa11.63□□□□□ -0.55
UBXN1-216ENST00000533908 BORCS7-ASMTA0A0B4J1R7 106 aa11.63□□□□□ -0.55
UBXN1-216ENST00000533908 TRBV6-1A0A0K0K1D8 114 aa11.63□□□□□ -0.55
UBXN1-216ENST00000533908 USP17L23D6RBM5 183 aa11.63□□□□□ -0.55
UBXN1-216ENST00000533908 PRSS1P07477 247 aa11.63□□□□□ -0.55
UBXN1-216ENST00000533908 KCNIP4Q6PIL6 250 aa11.63□□□□□ -0.55
UBXN1-216ENST00000533908 NTM-AS1Q6ZSK4 140 aa11.63□□□□□ -0.55
UBXN1-216ENST00000533908 INO80EQ8NBZ0 244 aaPredicted RBP11.63□□□□□ -0.55
UBXN1-216ENST00000533908 PANO1I0J062 215 aa11.62□□□□□ -0.55
UBXN1-216ENST00000533908 GIPP09681 153 aaPredicted RBP11.62□□□□□ -0.55
UBXN1-216ENST00000533908 RAB4BP61018 213 aa11.62□□□□□ -0.55
UBXN1-216ENST00000533908 RPL37AP61513 92 aaKnown RBP11.62□□□□□ -0.55
UBXN1-216ENST00000533908 UBE2G1P62253 170 aa11.62□□□□□ -0.55
UBXN1-216ENST00000533908 RPL19P84098 196 aaKnown RBP11.62□□□□□ -0.55
UBXN1-216ENST00000533908 C14orf177Q52M58 125 aa11.62□□□□□ -0.55
UBXN1-216ENST00000533908 KRTAP26-1Q6PEX3 210 aa11.62□□□□□ -0.55
UBXN1-216ENST00000533908 OR10AG1Q8NH19 301 aa11.62□□□□□ -0.55
UBXN1-216ENST00000533908 FXYD6-FXYD2A0A087WZ82 144 aa11.61□□□□□ -0.55
UBXN1-216ENST00000533908 MAP1LC3B2A6NCE7 125 aa11.61□□□□□ -0.55
UBXN1-216ENST00000533908 ANGP03950 147 aaKnown RBP11.61□□□□□ -0.55
UBXN1-216ENST00000533908 AKR1C8PQ5T2L2 129 aa11.61□□□□□ -0.55
UBXN1-216ENST00000533908 MAP1LC3BQ9GZQ8 125 aa11.61□□□□□ -0.55
UBXN1-216ENST00000533908 CYTL1Q9NRR1 136 aa11.61□□□□□ -0.55
UBXN1-216ENST00000533908 PLA2G2DQ9UNK4 145 aa11.61□□□□□ -0.55
UBXN1-216ENST00000533908 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.61□□□□□ -0.55
UBXN1-216ENST00000533908 MUC21A0A0G2JKD1 596 aa11.6□□□□□ -0.55
UBXN1-216ENST00000533908 MUC21A0A140T8X8 626 aa11.6□□□□□ -0.55
UBXN1-216ENST00000533908 G3V3Q6 166 aa11.6□□□□□ -0.55
UBXN1-216ENST00000533908 PTTG1O95997 202 aa11.6□□□□□ -0.55
UBXN1-216ENST00000533908 CST9LP1Q5W188 147 aa11.6□□□□□ -0.55
UBXN1-216ENST00000533908 HLA-DQA1P01909 254 aa11.59□□□□□ -0.55
UBXN1-216ENST00000533908 CRPP02741 224 aa11.59□□□□□ -0.55
UBXN1-216ENST00000533908 FHITP49789 147 aa11.59□□□□□ -0.55
UBXN1-216ENST00000533908 C9orf163Q8N9P6 203 aa11.59□□□□□ -0.55
UBXN1-216ENST00000533908 CHCHD5Q9BSY4 110 aa11.59□□□□□ -0.55
UBXN1-216ENST00000533908 ZNF56Q15929 161 aa11.58□□□□□ -0.56
UBXN1-216ENST00000533908 DGAT2L7PQ6IED9 249 aa11.58□□□□□ -0.56
UBXN1-216ENST00000533908 SDIM1Q6ZPB5 146 aa11.58□□□□□ -0.56
UBXN1-216ENST00000533908 SSBP4Q9BWG4 385 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms