RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 TMUB2Q71RG4 321 aa7.06□□□□□ -1.28
CAPN1-225ENST00000533704 MAPKAPK5-AS1Q8N8E1 139 aa7.06□□□□□ -1.28
CAPN1-225ENST00000533704 CLRN3Q8NCR9 226 aa7.06□□□□□ -1.28
CAPN1-225ENST00000533704 TCEAL7Q9BRU2 100 aa7.06□□□□□ -1.28
CAPN1-225ENST00000533704 SAMD10Q9BYL1 202 aa7.06□□□□□ -1.28
CAPN1-225ENST00000533704 Q9HAA7 133 aa7.06□□□□□ -1.28
CAPN1-225ENST00000533704 IL36BQ9NZH7 164 aa7.06□□□□□ -1.28
CAPN1-225ENST00000533704 PHLDA3Q9Y5J5 127 aa7.06□□□□□ -1.28
CAPN1-225ENST00000533704 A0A087WTM6 91 aa7.05□□□□□ -1.28
CAPN1-225ENST00000533704 K7EP13 123 aa7.05□□□□□ -1.28
CAPN1-225ENST00000533704 PSCAO43653 123 aa7.05□□□□□ -1.28
CAPN1-225ENST00000533704 LTAP01374 205 aa7.05□□□□□ -1.28
CAPN1-225ENST00000533704 H2AFB1P0C5Y9 115 aa7.05□□□□□ -1.28
CAPN1-225ENST00000533704 TPT1P13693 172 aaKnown RBP7.05□□□□□ -1.28
CAPN1-225ENST00000533704 ZFP2Q6ZN57 461 aa7.05□□□□□ -1.28
CAPN1-225ENST00000533704 C14orf178Q8N769 122 aaPredicted RBP7.05□□□□□ -1.28
CAPN1-225ENST00000533704 MBD3L1Q8WWY6 194 aa7.05□□□□□ -1.28
CAPN1-225ENST00000533704 KRTAP4-5Q9BYR2 181 aa7.05□□□□□ -1.28
CAPN1-225ENST00000533704 GTSF1LQ9H1H1 148 aa7.05□□□□□ -1.28
CAPN1-225ENST00000533704 A0A087WWL8 130 aa7.04□□□□□ -1.28
CAPN1-225ENST00000533704 TRBV6-1A0A0K0K1D8 114 aa7.04□□□□□ -1.28
CAPN1-225ENST00000533704 PCP4L1A6NKN8 68 aa7.04□□□□□ -1.28
CAPN1-225ENST00000533704 ZNF674Q2M3X9 581 aa7.04□□□□□ -1.28
CAPN1-225ENST00000533704 LINC01556Q5JQF7 62 aa7.04□□□□□ -1.28
CAPN1-225ENST00000533704 LELP1Q5T871 98 aa7.04□□□□□ -1.28
CAPN1-225ENST00000533704 RHODO00212 210 aa7.03□□□□□ -1.28
CAPN1-225ENST00000533704 S100A9P06702 114 aaKnown RBP7.03□□□□□ -1.28
CAPN1-225ENST00000533704 RPL19P84098 196 aaKnown RBP7.03□□□□□ -1.28
CAPN1-225ENST00000533704 LINC01559Q495D7 138 aa7.03□□□□□ -1.28
CAPN1-225ENST00000533704 PIK3CD-AS1Q5SR53 167 aa7.03□□□□□ -1.28
CAPN1-225ENST00000533704 DNLZQ5SXM8 178 aa7.03□□□□□ -1.28
CAPN1-225ENST00000533704 PRR27Q6MZM9 219 aa7.03□□□□□ -1.28
CAPN1-225ENST00000533704 COX8CQ7Z4L0 72 aa7.03□□□□□ -1.28
CAPN1-225ENST00000533704 BAGE2Q86Y30 109 aa7.03□□□□□ -1.28
CAPN1-225ENST00000533704 ZFP82Q8N141 532 aa7.03□□□□□ -1.28
CAPN1-225ENST00000533704 PGPEP1Q9NXJ5 209 aa7.03□□□□□ -1.28
CAPN1-225ENST00000533704 GNG13Q9P2W3 67 aa7.03□□□□□ -1.28
CAPN1-225ENST00000533704 Q9UF83 564 aa7.03□□□□□ -1.28
CAPN1-225ENST00000533704 LRP1BQ9NZR2 4599 aa7.03□□□□□ -1.28
CAPN1-225ENST00000533704 IBA57-AS1B1ANH7 110 aa7.02□□□□□ -1.29
CAPN1-225ENST00000533704 SSTP61278 116 aa7.02□□□□□ -1.29
CAPN1-225ENST00000533704 Q8N3U1 123 aa7.02□□□□□ -1.29
CAPN1-225ENST00000533704 SFRP2Q96HF1 295 aa7.02□□□□□ -1.29
CAPN1-225ENST00000533704 SCRT2Q9NQ03 307 aa7.02□□□□□ -1.29
CAPN1-225ENST00000533704 HSPG2P98160 4391 aa7.01□□□□□ -1.29
CAPN1-225ENST00000533704 MUC21A0A0G2JKD1 596 aa7.01□□□□□ -1.29
CAPN1-225ENST00000533704 MUC21A0A140T8X8 626 aa7.01□□□□□ -1.29
CAPN1-225ENST00000533704 CCL20P78556 96 aa7.01□□□□□ -1.29
CAPN1-225ENST00000533704 UFSP1Q6NVU6 142 aa7.01□□□□□ -1.29
CAPN1-225ENST00000533704 CDPF1Q6NVV7 123 aa7.01□□□□□ -1.29
CAPN1-225ENST00000533704 BIN3Q9NQY0 253 aa7.01□□□□□ -1.29
CAPN1-225ENST00000533704 RYR1P21817 5038 aa7□□□□□ -1.29
CAPN1-225ENST00000533704 LINC00694P0DN24 101 aa7□□□□□ -1.29
CAPN1-225ENST00000533704 RPL35P42766 123 aaKnown RBP7□□□□□ -1.29
CAPN1-225ENST00000533704 LINC00469Q8N7U9 141 aa7□□□□□ -1.29
CAPN1-225ENST00000533704 OR10AG1Q8NH19 301 aa7□□□□□ -1.29
CAPN1-225ENST00000533704 DERL1Q9BUN8 251 aa7□□□□□ -1.29
CAPN1-225ENST00000533704 MANBALQ9NQG1 85 aa7□□□□□ -1.29
CAPN1-225ENST00000533704 PCLOQ9Y6V0 5065 aa7□□□□□ -1.29
CAPN1-225ENST00000533704 A0A087WWC5 75 aa6.99□□□□□ -1.29
CAPN1-225ENST00000533704 IGLV5-52A0A0A0MRZ9 124 aa6.99□□□□□ -1.29
CAPN1-225ENST00000533704 TEX46H3BTG2 121 aa6.99□□□□□ -1.29
CAPN1-225ENST00000533704 AKR1D1P51857 326 aa6.99□□□□□ -1.29
CAPN1-225ENST00000533704 KRTAP10-1P60331 282 aa6.99□□□□□ -1.29
CAPN1-225ENST00000533704 ZNF56Q15929 161 aa6.99□□□□□ -1.29
CAPN1-225ENST00000533704 SPANXN1Q5VSR9 72 aa6.99□□□□□ -1.29
CAPN1-225ENST00000533704 EIF5AL1Q6IS14 154 aaKnown RBP6.99□□□□□ -1.29
CAPN1-225ENST00000533704 UQCC3Q6UW78 93 aa6.99□□□□□ -1.29
CAPN1-225ENST00000533704 DAZ4Q86SG3 579 aaKnown RBP6.99□□□□□ -1.29
CAPN1-225ENST00000533704 Q8N1X5 172 aa6.99□□□□□ -1.29
CAPN1-225ENST00000533704 C12orf57Q99622 126 aa6.99□□□□□ -1.29
CAPN1-225ENST00000533704 DAZ3Q9NR90 486 aaKnown RBP6.99□□□□□ -1.29
CAPN1-225ENST00000533704 URGCP-MRPS24S4R325 110 aa6.99□□□□□ -1.29
CAPN1-225ENST00000533704 F5H697 171 aa6.98□□□□□ -1.29
CAPN1-225ENST00000533704 F8W036 122 aa6.98□□□□□ -1.29
CAPN1-225ENST00000533704 APOC3P02656 99 aa6.98□□□□□ -1.29
CAPN1-225ENST00000533704 GCSHP23434 173 aa6.98□□□□□ -1.29
CAPN1-225ENST00000533704 RAB5CP51148 216 aa6.98□□□□□ -1.29
CAPN1-225ENST00000533704 RPL36AP83881 106 aaKnown RBP6.98□□□□□ -1.29
CAPN1-225ENST00000533704 CENPWQ5EE01 88 aa6.98□□□□□ -1.29
CAPN1-225ENST00000533704 RPL36ALQ969Q0 106 aaKnown RBP6.98□□□□□ -1.29
CAPN1-225ENST00000533704 MLST8Q9BVC4 326 aa6.98□□□□□ -1.29
CAPN1-225ENST00000533704 TPPP3Q9BW30 176 aa6.98□□□□□ -1.29
CAPN1-225ENST00000533704 TM2D2Q9BX73 214 aa6.98□□□□□ -1.29
CAPN1-225ENST00000533704 DNAH5Q8TE73 4624 aa6.98□□□□□ -1.29
CAPN1-225ENST00000533704 APOBP04114 4563 aaKnown RBP6.97□□□□□ -1.29
CAPN1-225ENST00000533704 TRAV1-1A0A0B4J248 108 aa6.97□□□□□ -1.29
CAPN1-225ENST00000533704 RAB19A4D1S5 217 aa6.97□□□□□ -1.29
CAPN1-225ENST00000533704 LRCOL1A6NCL2 159 aa6.97□□□□□ -1.29
CAPN1-225ENST00000533704 LECT2O14960 151 aa6.97□□□□□ -1.29
CAPN1-225ENST00000533704 IFNA1P01562 189 aa6.97□□□□□ -1.29
CAPN1-225ENST00000533704 CXCL1P09341 107 aa6.97□□□□□ -1.29
CAPN1-225ENST00000533704 SMIM6P0DI80 62 aa6.97□□□□□ -1.29
CAPN1-225ENST00000533704 GZMBP10144 247 aa6.97□□□□□ -1.29
CAPN1-225ENST00000533704 SULT1A2P50226 295 aa6.97□□□□□ -1.29
CAPN1-225ENST00000533704 LAGE3Q14657 143 aa6.97□□□□□ -1.29
CAPN1-225ENST00000533704 ALKAL2Q6UX46 152 aa6.97□□□□□ -1.29
CAPN1-225ENST00000533704 C11orf52Q96A22 123 aa6.97□□□□□ -1.29
CAPN1-225ENST00000533704 DAZAP1Q96EP5 407 aaKnown RBP6.97□□□□□ -1.29
CAPN1-225ENST00000533704 TRBV7-3A0A075B6L6 115 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms