RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 RNF183Q96D59 192 aa9.68□□□□□ -0.86
TRAPPC4-214ENST00000533632 OVOL2Q9BRP0 275 aa9.68□□□□□ -0.86
TRAPPC4-214ENST00000533632 X6R8D5 127 aa9.68□□□□□ -0.86
TRAPPC4-214ENST00000533632 IGHV3-16A0A0C4DH30 117 aa9.68□□□□□ -0.86
TRAPPC4-214ENST00000533632 RAB4AP20338 218 aa9.68□□□□□ -0.86
TRAPPC4-214ENST00000533632 MRPL51Q4U2R6 128 aaKnown RBP9.68□□□□□ -0.86
TRAPPC4-214ENST00000533632 RCHY1Q96PM5 261 aa9.68□□□□□ -0.86
TRAPPC4-214ENST00000533632 LINC01587Q99440 93 aa9.68□□□□□ -0.86
TRAPPC4-214ENST00000533632 SMIM6P0DI80 62 aa9.67□□□□□ -0.86
TRAPPC4-214ENST00000533632 AZU1P20160 251 aa9.67□□□□□ -0.86
TRAPPC4-214ENST00000533632 CKS2P33552 79 aa9.67□□□□□ -0.86
TRAPPC4-214ENST00000533632 LINC00310P59036 64 aa9.67□□□□□ -0.86
TRAPPC4-214ENST00000533632 CHCHD1Q96BP2 118 aaKnown RBP9.67□□□□□ -0.86
TRAPPC4-214ENST00000533632 C9orf85Q96MD7 179 aa9.67□□□□□ -0.86
TRAPPC4-214ENST00000533632 TMEM208Q9BTX3 173 aa9.67□□□□□ -0.86
TRAPPC4-214ENST00000533632 GOLT1BQ9Y3E0 138 aa9.67□□□□□ -0.86
TRAPPC4-214ENST00000533632 D6R8Y8 96 aa9.66□□□□□ -0.86
TRAPPC4-214ENST00000533632 NHLRC4P0CG21 123 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC4-214ENST00000533632 HTN1P15515 57 aa9.66□□□□□ -0.86
TRAPPC4-214ENST00000533632 SYT8Q8NBV8 401 aa9.66□□□□□ -0.86
TRAPPC4-214ENST00000533632 OR10D4PQ8NGN7 298 aa9.66□□□□□ -0.86
TRAPPC4-214ENST00000533632 RNF185Q96GF1 192 aa9.66□□□□□ -0.86
TRAPPC4-214ENST00000533632 PRELID3AQ96N28 172 aa9.66□□□□□ -0.86
TRAPPC4-214ENST00000533632 AP1S3Q96PC3 154 aa9.66□□□□□ -0.86
TRAPPC4-214ENST00000533632 TIMM8BQ9Y5J9 83 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC4-214ENST00000533632 CBY3A6NI87 242 aa9.65□□□□□ -0.86
TRAPPC4-214ENST00000533632 M0R381 172 aa9.65□□□□□ -0.86
TRAPPC4-214ENST00000533632 SPRY2O43597 315 aa9.65□□□□□ -0.86
TRAPPC4-214ENST00000533632 NUPR1O60356 82 aa9.65□□□□□ -0.86
TRAPPC4-214ENST00000533632 EVI2AP22794 236 aa9.65□□□□□ -0.86
TRAPPC4-214ENST00000533632 OR11H2Q8NH07 326 aa9.65□□□□□ -0.86
TRAPPC4-214ENST00000533632 MRAP2Q96G30 205 aa9.65□□□□□ -0.86
TRAPPC4-214ENST00000533632 SAMD10Q9BYL1 202 aa9.65□□□□□ -0.86
TRAPPC4-214ENST00000533632 DPH3P1Q9H4G8 78 aa9.65□□□□□ -0.86
TRAPPC4-214ENST00000533632 DNAH7Q8WXX0 4024 aa9.65□□□□□ -0.86
TRAPPC4-214ENST00000533632 IQCJQ1A5X6 159 aa9.65□□□□□ -0.87
TRAPPC4-214ENST00000533632 NIT1Q86X76 327 aa9.65□□□□□ -0.87
TRAPPC4-214ENST00000533632 TP53TG1Q9Y2A0 90 aa9.65□□□□□ -0.87
TRAPPC4-214ENST00000533632 PLAC8L1A1L4L8 177 aa9.64□□□□□ -0.87
TRAPPC4-214ENST00000533632 HSBP1O75506 76 aa9.64□□□□□ -0.87
TRAPPC4-214ENST00000533632 LINC00614P0C842 121 aa9.64□□□□□ -0.87
TRAPPC4-214ENST00000533632 PMCHP20382 165 aa9.64□□□□□ -0.87
TRAPPC4-214ENST00000533632 PIK3CD-AS1Q5SR53 167 aa9.64□□□□□ -0.87
TRAPPC4-214ENST00000533632 PTH2Q96A98 100 aa9.64□□□□□ -0.87
TRAPPC4-214ENST00000533632 Q8NAQ8 132 aa9.63□□□□□ -0.87
TRAPPC4-214ENST00000533632 C11orf72Q8NBR9 251 aa9.63□□□□□ -0.87
TRAPPC4-214ENST00000533632 RNASE8Q8TDE3 154 aaKnown RBP9.63□□□□□ -0.87
TRAPPC4-214ENST00000533632 SPATA25Q9BR10 227 aa9.63□□□□□ -0.87
TRAPPC4-214ENST00000533632 MDFICQ9P1T7 246 aa9.63□□□□□ -0.87
TRAPPC4-214ENST00000533632 MUC4Q99102 2169 aa9.63□□□□□ -0.87
TRAPPC4-214ENST00000533632 TMEM238LA0A1B0GVL6 79 aa9.63□□□□□ -0.87
TRAPPC4-214ENST00000533632 PCP4L1A6NKN8 68 aa9.63□□□□□ -0.87
TRAPPC4-214ENST00000533632 PPP1R17O96001 155 aa9.63□□□□□ -0.87
TRAPPC4-214ENST00000533632 SMIM17P0DL12 118 aa9.63□□□□□ -0.87
TRAPPC4-214ENST00000533632 AMTP48728 403 aa9.63□□□□□ -0.87
TRAPPC4-214ENST00000533632 ZNF415Q09FC8 603 aa9.63□□□□□ -0.87
TRAPPC4-214ENST00000533632 RNASEKQ6P5S7 137 aaKnown RBP9.63□□□□□ -0.87
TRAPPC4-214ENST00000533632 PRSS3P2Q8NHM4 247 aa9.63□□□□□ -0.87
TRAPPC4-214ENST00000533632 GSN-AS1Q9NRJ2 163 aa9.63□□□□□ -0.87
TRAPPC4-214ENST00000533632 DEFB4AO15263 64 aa9.62□□□□□ -0.87
TRAPPC4-214ENST00000533632 RRN3P1Q2M238 152 aa9.62□□□□□ -0.87
TRAPPC4-214ENST00000533632 POM121L12Q8N7R1 296 aa9.62□□□□□ -0.87
TRAPPC4-214ENST00000533632 SPXQ9BT56 116 aa9.62□□□□□ -0.87
TRAPPC4-214ENST00000533632 IGHV4-28A0A0C4DH34 117 aa9.61□□□□□ -0.87
TRAPPC4-214ENST00000533632 PRSS47A8MTI9 375 aa9.61□□□□□ -0.87
TRAPPC4-214ENST00000533632 FA2HQ7L5A8 372 aa9.61□□□□□ -0.87
TRAPPC4-214ENST00000533632 NDUFAF3Q9BU61 184 aa9.61□□□□□ -0.87
TRAPPC4-214ENST00000533632 MAP1LC3AQ9H492 121 aa9.61□□□□□ -0.87
TRAPPC4-214ENST00000533632 ZMAT4Q9H898 229 aa9.61□□□□□ -0.87
TRAPPC4-214ENST00000533632 AP5S1Q9NUS5 200 aa9.61□□□□□ -0.87
TRAPPC4-214ENST00000533632 SMIM9A6NGZ8 99 aa9.6□□□□□ -0.87
TRAPPC4-214ENST00000533632 TNFRSF6BO95407 300 aa9.6□□□□□ -0.87
TRAPPC4-214ENST00000533632 C14orf178Q8N769 122 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC4-214ENST00000533632 IL17DQ8TAD2 202 aa9.6□□□□□ -0.87
TRAPPC4-214ENST00000533632 TMEM263Q8WUH6 116 aaKnown RBP9.6□□□□□ -0.87
TRAPPC4-214ENST00000533632 URB1-AS1Q96HZ7 61 aa9.6□□□□□ -0.87
TRAPPC4-214ENST00000533632 C12orf57Q99622 126 aa9.6□□□□□ -0.87
TRAPPC4-214ENST00000533632 NXT2Q9NPJ8 142 aaKnown RBP9.6□□□□□ -0.87
TRAPPC4-214ENST00000533632 M0R2P5 195 aa9.6□□□□□ -0.87
TRAPPC4-214ENST00000533632 NPYP01303 97 aa9.6□□□□□ -0.87
TRAPPC4-214ENST00000533632 MIFP14174 115 aa9.6□□□□□ -0.87
TRAPPC4-214ENST00000533632 JOSD1Q15040 202 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC4-214ENST00000533632 ZNF876PQ49A33 203 aa9.6□□□□□ -0.87
TRAPPC4-214ENST00000533632 KIF25-AS1Q9Y6Z4 181 aa9.6□□□□□ -0.87
TRAPPC4-214ENST00000533632 EMP1P54849 157 aa9.59□□□□□ -0.87
TRAPPC4-214ENST00000533632 PYY3Q5JQD4 70 aa9.59□□□□□ -0.87
TRAPPC4-214ENST00000533632 C16orf74Q96GX8 76 aa9.59□□□□□ -0.87
TRAPPC4-214ENST00000533632 CSMD3Q7Z407 3707 aa9.59□□□□□ -0.87
TRAPPC4-214ENST00000533632 SMKR1H3BMG3 65 aa9.58□□□□□ -0.88
TRAPPC4-214ENST00000533632 NCR2O95944 276 aa9.58□□□□□ -0.88
TRAPPC4-214ENST00000533632 C20orf78Q9BR46 151 aa9.58□□□□□ -0.88
TRAPPC4-214ENST00000533632 EDA2RQ9HAV5 297 aa9.58□□□□□ -0.88
TRAPPC4-214ENST00000533632 LINC01546A6NGU7 62 aa9.58□□□□□ -0.88
TRAPPC4-214ENST00000533632 IFI27P40305 119 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC4-214ENST00000533632 LINC00315P59091 139 aa9.58□□□□□ -0.88
TRAPPC4-214ENST00000533632 NRACQ8N912 160 aa9.58□□□□□ -0.88
TRAPPC4-214ENST00000533632 LOC389332A0A1B0GUA5 103 aa9.57□□□□□ -0.88
TRAPPC4-214ENST00000533632 A8MWV9 139 aa9.57□□□□□ -0.88
TRAPPC4-214ENST00000533632 FAM19A2Q8N3H0 131 aa9.57□□□□□ -0.88
TRAPPC4-214ENST00000533632 NOP10Q9NPE3 64 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms