RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 TRAV9-2A0A087WT02 112 aa8.43□□□□□ -1.06
SF3B2-213ENST00000533421 K7EP13 123 aa8.43□□□□□ -1.06
SF3B2-213ENST00000533421 ADIRFQ15847 76 aa8.43□□□□□ -1.06
SF3B2-213ENST00000533421 FAM74A4Q5TZK3 123 aa8.43□□□□□ -1.06
SF3B2-213ENST00000533421 PTH2Q96A98 100 aa8.43□□□□□ -1.06
SF3B2-213ENST00000533421 SMIM12Q96EX1 92 aa8.43□□□□□ -1.06
SF3B2-213ENST00000533421 RPP21Q9H633 154 aaKnown RBP8.43□□□□□ -1.06
SF3B2-213ENST00000533421 A0A1B0GVY2 172 aa8.42□□□□□ -1.06
SF3B2-213ENST00000533421 K7EQD1 137 aa8.42□□□□□ -1.06
SF3B2-213ENST00000533421 GATCO43716 136 aaKnown RBP8.42□□□□□ -1.06
SF3B2-213ENST00000533421 GYPEP15421 78 aa8.42□□□□□ -1.06
SF3B2-213ENST00000533421 ERVFC1-1P60608 527 aa8.42□□□□□ -1.06
SF3B2-213ENST00000533421 RPL23P62829 140 aaKnown RBP8.42□□□□□ -1.06
SF3B2-213ENST00000533421 TMEM241Q24JQ0 296 aa8.42□□□□□ -1.06
SF3B2-213ENST00000533421 FER1L6-AS1Q8NA97 138 aa8.42□□□□□ -1.06
SF3B2-213ENST00000533421 PRADC1Q9BSG0 188 aa8.42□□□□□ -1.06
SF3B2-213ENST00000533421 MSRB1Q9NZV6 116 aa8.42□□□□□ -1.06
SF3B2-213ENST00000533421 Q9UF83 564 aa8.42□□□□□ -1.06
SF3B2-213ENST00000533421 HECTD4Q9Y4D8 3996 aa8.42□□□□□ -1.06
SF3B2-213ENST00000533421 NXPH4O95158 308 aa8.41□□□□□ -1.06
SF3B2-213ENST00000533421 IGLC6P0CF74 106 aa8.41□□□□□ -1.06
SF3B2-213ENST00000533421 GATA1P15976 413 aaPredicted RBP8.41□□□□□ -1.06
SF3B2-213ENST00000533421 PIK3CD-AS1Q5SR53 167 aa8.41□□□□□ -1.06
SF3B2-213ENST00000533421 SPANXN1Q5VSR9 72 aa8.41□□□□□ -1.06
SF3B2-213ENST00000533421 LYZL1Q6UWQ5 148 aa8.41□□□□□ -1.06
SF3B2-213ENST00000533421 ZFP82Q8N141 532 aa8.41□□□□□ -1.06
SF3B2-213ENST00000533421 SYT8Q8NBV8 401 aa8.41□□□□□ -1.06
SF3B2-213ENST00000533421 BIN3Q9NQY0 253 aa8.41□□□□□ -1.06
SF3B2-213ENST00000533421 A8MWV9 139 aa8.4□□□□□ -1.06
SF3B2-213ENST00000533421 SNAI2O43623 268 aa8.4□□□□□ -1.06
SF3B2-213ENST00000533421 NDUFS6O75380 124 aaKnown RBP8.4□□□□□ -1.06
SF3B2-213ENST00000533421 CXCL1P09341 107 aa8.4□□□□□ -1.06
SF3B2-213ENST00000533421 MED14OSP0DP75 135 aa8.4□□□□□ -1.06
SF3B2-213ENST00000533421 RPS20P60866 119 aaKnown RBP8.4□□□□□ -1.06
SF3B2-213ENST00000533421 RHOHQ15669 191 aa8.4□□□□□ -1.06
SF3B2-213ENST00000533421 LYPD5Q6UWN5 251 aa8.4□□□□□ -1.06
SF3B2-213ENST00000533421 COMMD7Q86VX2 200 aa8.4□□□□□ -1.06
SF3B2-213ENST00000533421 C14orf178Q8N769 122 aaPredicted RBP8.4□□□□□ -1.06
SF3B2-213ENST00000533421 SLC25A29Q8N8R3 303 aa8.4□□□□□ -1.06
SF3B2-213ENST00000533421 GTSF1Q8WW33 167 aa8.4□□□□□ -1.06
SF3B2-213ENST00000533421 ISOC2Q96AB3 205 aa8.4□□□□□ -1.06
SF3B2-213ENST00000533421 SSBP4Q9BWG4 385 aaPredicted RBP8.4□□□□□ -1.06
SF3B2-213ENST00000533421 NAT8Q9UHE5 227 aa8.4□□□□□ -1.06
SF3B2-213ENST00000533421 LY96Q9Y6Y9 160 aa8.4□□□□□ -1.06
SF3B2-213ENST00000533421 RYR1P21817 5038 aa8.4□□□□□ -1.06
SF3B2-213ENST00000533421 TRBV6-4A0A1B0GX49 114 aa8.39□□□□□ -1.07
SF3B2-213ENST00000533421 CRYGDP07320 174 aa8.39□□□□□ -1.07
SF3B2-213ENST00000533421 OR5AL1P0C617 328 aa8.39□□□□□ -1.07
SF3B2-213ENST00000533421 EVI2AP22794 236 aa8.39□□□□□ -1.07
SF3B2-213ENST00000533421 UFSP1Q6NVU6 142 aa8.39□□□□□ -1.07
SF3B2-213ENST00000533421 NFE4Q86UQ8 179 aa8.39□□□□□ -1.07
SF3B2-213ENST00000533421 SFRP2Q96HF1 295 aa8.39□□□□□ -1.07
SF3B2-213ENST00000533421 PGLYRP4Q96LB8 373 aa8.39□□□□□ -1.07
SF3B2-213ENST00000533421 TIRAPP58753 221 aa8.38□□□□□ -1.07
SF3B2-213ENST00000533421 FAM74A3Q4VXF1 159 aa8.38□□□□□ -1.07
SF3B2-213ENST00000533421 ZFP2Q6ZN57 461 aa8.38□□□□□ -1.07
SF3B2-213ENST00000533421 FAM231DQ6ZW35 169 aa8.38□□□□□ -1.07
SF3B2-213ENST00000533421 C10orf126Q8N4M7 172 aa8.38□□□□□ -1.07
SF3B2-213ENST00000533421 XKRY2A2RUG3 117 aa8.37□□□□□ -1.07
SF3B2-213ENST00000533421 RHODO00212 210 aa8.37□□□□□ -1.07
SF3B2-213ENST00000533421 EREGO14944 169 aa8.37□□□□□ -1.07
SF3B2-213ENST00000533421 MGPP08493 103 aa8.37□□□□□ -1.07
SF3B2-213ENST00000533421 TNP2Q05952 138 aa8.37□□□□□ -1.07
SF3B2-213ENST00000533421 ZNF56Q15929 161 aa8.37□□□□□ -1.07
SF3B2-213ENST00000533421 SMDT1Q9H4I9 107 aa8.37□□□□□ -1.07
SF3B2-213ENST00000533421 V9GYV3 84 aa8.37□□□□□ -1.07
SF3B2-213ENST00000533421 TRAV8-6A0A0B4J262 113 aa8.36□□□□□ -1.07
SF3B2-213ENST00000533421 GAGE12JA6NER3 117 aa8.36□□□□□ -1.07
SF3B2-213ENST00000533421 ADCYAP1P18509 176 aa8.36□□□□□ -1.07
SF3B2-213ENST00000533421 NTF3P20783 257 aa8.36□□□□□ -1.07
SF3B2-213ENST00000533421 CTRLP40313 264 aa8.36□□□□□ -1.07
SF3B2-213ENST00000533421 FOXA3P55318 350 aaPredicted RBP8.36□□□□□ -1.07
SF3B2-213ENST00000533421 GAGE1Q13065 139 aa8.36□□□□□ -1.07
SF3B2-213ENST00000533421 GAGE4Q13068 117 aa8.36□□□□□ -1.07
SF3B2-213ENST00000533421 GAGE5Q13069 117 aa8.36□□□□□ -1.07
SF3B2-213ENST00000533421 GAGE13Q4V321 117 aa8.36□□□□□ -1.07
SF3B2-213ENST00000533421 OR10G8Q8NGN5 311 aa8.36□□□□□ -1.07
SF3B2-213ENST00000533421 OSTCQ9NRP0 149 aa8.36□□□□□ -1.07
SF3B2-213ENST00000533421 C16orf90A8MZG2 172 aa8.35□□□□□ -1.07
SF3B2-213ENST00000533421 LINC00315P59091 139 aa8.35□□□□□ -1.07
SF3B2-213ENST00000533421 TWIST1Q15672 202 aa8.35□□□□□ -1.07
SF3B2-213ENST00000533421 C15orf54Q8N8G6 183 aa8.35□□□□□ -1.07
SF3B2-213ENST00000533421 AP1S3Q96PC3 154 aa8.35□□□□□ -1.07
SF3B2-213ENST00000533421 KRTAP1-5Q9BYS1 174 aa8.35□□□□□ -1.07
SF3B2-213ENST00000533421 A8MWL6 223 aa8.34□□□□□ -1.07
SF3B2-213ENST00000533421 F5H697 171 aa8.34□□□□□ -1.07
SF3B2-213ENST00000533421 DNAH10OSP0CZ25 163 aa8.34□□□□□ -1.07
SF3B2-213ENST00000533421 CACNG7P62955 275 aa8.34□□□□□ -1.07
SF3B2-213ENST00000533421 TSKUQ8WUA8 353 aa8.34□□□□□ -1.07
SF3B2-213ENST00000533421 KIF25-AS1Q9Y6Z4 181 aa8.34□□□□□ -1.07
SF3B2-213ENST00000533421 DNAH17Q9UFH2 4485 aa8.34□□□□□ -1.07
SF3B2-213ENST00000533421 IGHV3-38A0A0C4DH36 116 aa8.33□□□□□ -1.08
SF3B2-213ENST00000533421 TMEM218A2RU14 115 aa8.33□□□□□ -1.08
SF3B2-213ENST00000533421 LINC00862A6NCI5 91 aa8.33□□□□□ -1.08
SF3B2-213ENST00000533421 HIGD1CA8MV81 97 aa8.33□□□□□ -1.08
SF3B2-213ENST00000533421 F2Z2F3 143 aa8.33□□□□□ -1.08
SF3B2-213ENST00000533421 SMIM17P0DL12 118 aa8.33□□□□□ -1.08
SF3B2-213ENST00000533421 OR10J3Q5JRS4 329 aa8.33□□□□□ -1.08
SF3B2-213ENST00000533421 WFDC10BQ8IUB3 73 aa8.33□□□□□ -1.08
SF3B2-213ENST00000533421 ATP6V0E2Q8NHE4 81 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms