RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 RPS20P60866 119 aaKnown RBP13.98□□□□□ -0.17
CCS-208ENST00000533244 SOHLH1Q5JUK2 328 aa13.98□□□□□ -0.17
CCS-208ENST00000533244 OR2D3Q8NGH3 330 aa13.98□□□□□ -0.17
CCS-208ENST00000533244 K7EN84 100 aa13.98□□□□□ -0.17
CCS-208ENST00000533244 C6orf223Q8N319 242 aa13.98□□□□□ -0.17
CCS-208ENST00000533244 OCC1Q8TAD7 63 aa13.98□□□□□ -0.17
CCS-208ENST00000533244 A0A087WWL8 130 aa13.97□□□□□ -0.17
CCS-208ENST00000533244 P01737 135 aa13.97□□□□□ -0.17
CCS-208ENST00000533244 FAM74A4Q5TZK3 123 aa13.97□□□□□ -0.17
CCS-208ENST00000533244 C14orf178Q8N769 122 aaPredicted RBP13.97□□□□□ -0.17
CCS-208ENST00000533244 A0A1B0GVY2 172 aa13.96□□□□□ -0.18
CCS-208ENST00000533244 GZMBP10144 247 aa13.96□□□□□ -0.18
CCS-208ENST00000533244 NUDT10Q8NFP7 164 aa13.96□□□□□ -0.18
CCS-208ENST00000533244 NUDT11Q96G61 164 aa13.96□□□□□ -0.18
CCS-208ENST00000533244 EIF5A2Q9GZV4 153 aaKnown RBP13.96□□□□□ -0.18
CCS-208ENST00000533244 PRSS29PA6NIE9 313 aa13.95□□□□□ -0.18
CCS-208ENST00000533244 BTF3P20290 206 aaKnown RBP13.95□□□□□ -0.18
CCS-208ENST00000533244 WFDC10BQ8IUB3 73 aa13.95□□□□□ -0.18
CCS-208ENST00000533244 Q9UF83 564 aa13.95□□□□□ -0.18
CCS-208ENST00000533244 SPANXN1Q5VSR9 72 aa13.94□□□□□ -0.18
CCS-208ENST00000533244 FER1L6-AS1Q8NA97 138 aa13.94□□□□□ -0.18
CCS-208ENST00000533244 PKD1P98161 4303 aa13.94□□□□□ -0.18
CCS-208ENST00000533244 MUC21A0A0G2JKD1 596 aa13.93□□□□□ -0.18
CCS-208ENST00000533244 MUC21A0A140T8X8 626 aa13.93□□□□□ -0.18
CCS-208ENST00000533244 XKRY2A2RUG3 117 aa13.93□□□□□ -0.18
CCS-208ENST00000533244 SRP19P09132 144 aaKnown RBP13.93□□□□□ -0.18
CCS-208ENST00000533244 ATP6V0E2Q8NHE4 81 aa13.93□□□□□ -0.18
CCS-208ENST00000533244 LY96Q9Y6Y9 160 aa13.93□□□□□ -0.18
CCS-208ENST00000533244 GAGE12JA6NER3 117 aa13.92□□□□□ -0.18
CCS-208ENST00000533244 DNAH10OSP0CZ25 163 aa13.92□□□□□ -0.18
CCS-208ENST00000533244 GAGE1Q13065 139 aa13.92□□□□□ -0.18
CCS-208ENST00000533244 GAGE4Q13068 117 aa13.92□□□□□ -0.18
CCS-208ENST00000533244 GAGE5Q13069 117 aa13.92□□□□□ -0.18
CCS-208ENST00000533244 GAGE13Q4V321 117 aa13.92□□□□□ -0.18
CCS-208ENST00000533244 RNASE7Q9H1E1 156 aaKnown RBP13.92□□□□□ -0.18
CCS-208ENST00000533244 KIF25-AS1Q9Y6Z4 181 aa13.92□□□□□ -0.18
CCS-208ENST00000533244 GTSF1LQ9H1H1 148 aa13.91□□□□□ -0.18
CCS-208ENST00000533244 RPP21Q9H633 154 aaKnown RBP13.91□□□□□ -0.18
CCS-208ENST00000533244 TRBV10-1A0A0K0K1A3 114 aa13.9□□□□□ -0.18
CCS-208ENST00000533244 F2Z2F3 143 aa13.9□□□□□ -0.18
CCS-208ENST00000533244 CEBPGP53567 150 aa13.9□□□□□ -0.18
CCS-208ENST00000533244 RAB4BP61018 213 aa13.9□□□□□ -0.18
CCS-208ENST00000533244 LELP1Q5T871 98 aa13.9□□□□□ -0.18
CCS-208ENST00000533244 FAM231DQ6ZW35 169 aa13.9□□□□□ -0.18
CCS-208ENST00000533244 SMIM7Q9BQ49 75 aa13.9□□□□□ -0.18
CCS-208ENST00000533244 K7EP13 123 aa13.9□□□□□ -0.19
CCS-208ENST00000533244 CTRLP40313 264 aa13.9□□□□□ -0.19
CCS-208ENST00000533244 LINC00315P59091 139 aa13.9□□□□□ -0.19
CCS-208ENST00000533244 CACNG7P62955 275 aa13.9□□□□□ -0.19
CCS-208ENST00000533244 AP1S3Q96PC3 154 aa13.9□□□□□ -0.19
CCS-208ENST00000533244 TPPP3Q9BW30 176 aa13.9□□□□□ -0.19
CCS-208ENST00000533244 PKHD1P08F94 4074 aa13.89□□□□□ -0.19
CCS-208ENST00000533244 LYZL1Q6UWQ5 148 aa13.88□□□□□ -0.19
CCS-208ENST00000533244 LINC01551Q86U37 167 aa13.88□□□□□ -0.19
CCS-208ENST00000533244 OR10G8Q8NGN5 311 aa13.88□□□□□ -0.19
CCS-208ENST00000533244 CNFNQ9BYD5 112 aa13.88□□□□□ -0.19
CCS-208ENST00000533244 MSRB1Q9NZV6 116 aa13.88□□□□□ -0.19
CCS-208ENST00000533244 ZNF727A8MUV8 499 aa13.87□□□□□ -0.19
CCS-208ENST00000533244 SSTP61278 116 aa13.87□□□□□ -0.19
CCS-208ENST00000533244 TNP2Q05952 138 aa13.87□□□□□ -0.19
CCS-208ENST00000533244 ZNF56Q15929 161 aa13.87□□□□□ -0.19
CCS-208ENST00000533244 WDR73Q6P4I2 378 aa13.87□□□□□ -0.19
CCS-208ENST00000533244 DNAH11Q96DT5 4516 aa13.87□□□□□ -0.19
CCS-208ENST00000533244 TRAV9-2A0A087WT02 112 aa13.86□□□□□ -0.19
CCS-208ENST00000533244 TRAV8-6A0A0B4J262 113 aa13.86□□□□□ -0.19
CCS-208ENST00000533244 IGHV3-38A0A0C4DH36 116 aa13.86□□□□□ -0.19
CCS-208ENST00000533244 C9JQL5 133 aa13.86□□□□□ -0.19
CCS-208ENST00000533244 EVI2AP22794 236 aa13.86□□□□□ -0.19
CCS-208ENST00000533244 LINC01556Q5JQF7 62 aa13.86□□□□□ -0.19
CCS-208ENST00000533244 Q6ZRN7 208 aaPredicted RBP13.86□□□□□ -0.19
CCS-208ENST00000533244 UBE2D3P61077 147 aa13.85□□□□□ -0.19
CCS-208ENST00000533244 UBE2D2P62837 147 aa13.85□□□□□ -0.19
CCS-208ENST00000533244 RPL36AP83881 106 aaKnown RBP13.85□□□□□ -0.19
CCS-208ENST00000533244 SRSF3P84103 164 aaKnown RBP13.85□□□□□ -0.19
CCS-208ENST00000533244 OR10J3Q5JRS4 329 aa13.85□□□□□ -0.19
CCS-208ENST00000533244 GTSF1Q8WW33 167 aa13.85□□□□□ -0.19
CCS-208ENST00000533244 RPL36ALQ969Q0 106 aaKnown RBP13.85□□□□□ -0.19
CCS-208ENST00000533244 SMDT1Q9H4I9 107 aa13.85□□□□□ -0.19
CCS-208ENST00000533244 TRBV7-3A0A075B6L6 115 aa13.84□□□□□ -0.19
CCS-208ENST00000533244 GATCO43716 136 aaKnown RBP13.84□□□□□ -0.19
CCS-208ENST00000533244 SMIM17P0DL12 118 aa13.84□□□□□ -0.19
CCS-208ENST00000533244 FAM74A3Q4VXF1 159 aa13.84□□□□□ -0.19
CCS-208ENST00000533244 CT83Q5H943 113 aa13.84□□□□□ -0.19
CCS-208ENST00000533244 NEXN-AS1Q8NBZ9 246 aa13.84□□□□□ -0.19
CCS-208ENST00000533244 A0A087WWC5 75 aa13.83□□□□□ -0.2
CCS-208ENST00000533244 NTF3P20783 257 aa13.83□□□□□ -0.2
CCS-208ENST00000533244 C10orf126Q8N4M7 172 aa13.83□□□□□ -0.2
CCS-208ENST00000533244 TRGC1P0CF51 173 aa13.82□□□□□ -0.2
CCS-208ENST00000533244 ERVFC1-1P60608 527 aa13.82□□□□□ -0.2
CCS-208ENST00000533244 PEA15Q15121 130 aa13.82□□□□□ -0.2
CCS-208ENST00000533244 DYNC1H1Q14204 4646 aaKnown RBP13.82□□□□□ -0.2
CCS-208ENST00000533244 A8MWL6 223 aa13.81□□□□□ -0.2
CCS-208ENST00000533244 F5H697 171 aa13.81□□□□□ -0.2
CCS-208ENST00000533244 OSTCQ9NRP0 149 aa13.81□□□□□ -0.2
CCS-208ENST00000533244 FOXA3P55318 350 aaPredicted RBP13.81□□□□□ -0.2
CCS-208ENST00000533244 TNFRSF18Q9Y5U5 241 aa13.81□□□□□ -0.2
CCS-208ENST00000533244 TMEM241Q24JQ0 296 aa13.8□□□□□ -0.2
CCS-208ENST00000533244 NFE4Q86UQ8 179 aa13.8□□□□□ -0.2
CCS-208ENST00000533244 DPH3P1Q9H4G8 78 aa13.8□□□□□ -0.2
CCS-208ENST00000533244 M0QY20 66 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms