RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 SPANXDQ9BXN6 97 aa11.42□□□□□ -0.58
PCDHA9-202ENST00000532602 PTPN13Q12923 2485 aa11.41□□□□□ -0.58
PCDHA9-202ENST00000532602 DNAJC9-AS1A6NH13 148 aa11.41□□□□□ -0.58
PCDHA9-202ENST00000532602 COX11Q9Y6N1 276 aa11.41□□□□□ -0.58
PCDHA9-202ENST00000532602 IGHV3-30P01768 117 aa11.4□□□□□ -0.58
PCDHA9-202ENST00000532602 IGHV3-33P01772 117 aa11.4□□□□□ -0.58
PCDHA9-202ENST00000532602 IGHV3-30-3P0DP02 117 aa11.4□□□□□ -0.58
PCDHA9-202ENST00000532602 IGHV3-30-5P0DP03 117 aa11.4□□□□□ -0.58
PCDHA9-202ENST00000532602 WFDC11Q8NEX6 87 aa11.4□□□□□ -0.58
PCDHA9-202ENST00000532602 IGLC2P0DOY2 106 aa11.4□□□□□ -0.58
PCDHA9-202ENST00000532602 IGLC3P0DOY3 106 aa11.4□□□□□ -0.58
PCDHA9-202ENST00000532602 PPDPFLQ8WWR9 84 aa11.4□□□□□ -0.58
PCDHA9-202ENST00000532602 TNFRSF13BO14836 293 aaPredicted RBP11.4□□□□□ -0.58
PCDHA9-202ENST00000532602 AMTNQ6UX39 209 aa11.4□□□□□ -0.58
PCDHA9-202ENST00000532602 IGLV2-14P01704 120 aa11.4□□□□□ -0.59
PCDHA9-202ENST00000532602 DEFB135Q30KP9 77 aa11.39□□□□□ -0.59
PCDHA9-202ENST00000532602 MRPL36Q9P0J6 103 aaKnown RBP11.39□□□□□ -0.59
PCDHA9-202ENST00000532602 TEX22C9J3V5 150 aa11.39□□□□□ -0.59
PCDHA9-202ENST00000532602 TRAV4A0A0B4J268 109 aa11.39□□□□□ -0.59
PCDHA9-202ENST00000532602 PRSS47A8MTI9 375 aa11.39□□□□□ -0.59
PCDHA9-202ENST00000532602 SIVA1O15304 175 aa11.39□□□□□ -0.59
PCDHA9-202ENST00000532602 C9orf118A6NHY6 69 aa11.39□□□□□ -0.59
PCDHA9-202ENST00000532602 IGHG4P01861 327 aa11.39□□□□□ -0.59
PCDHA9-202ENST00000532602 A6NDX4 124 aa11.39□□□□□ -0.59
PCDHA9-202ENST00000532602 HHLA3Q9XRX5 114 aa11.39□□□□□ -0.59
PCDHA9-202ENST00000532602 WI2-2373I1.2A0A1W2PRP0 233 aa11.38□□□□□ -0.59
PCDHA9-202ENST00000532602 MYO18BQ8IUG5 2567 aa11.38□□□□□ -0.59
PCDHA9-202ENST00000532602 IFITM1P13164 125 aa11.38□□□□□ -0.59
PCDHA9-202ENST00000532602 GATA1P15976 413 aaPredicted RBP11.38□□□□□ -0.59
PCDHA9-202ENST00000532602 CEND1Q8N111 149 aa11.38□□□□□ -0.59
PCDHA9-202ENST00000532602 CARD19Q96LW7 228 aa11.38□□□□□ -0.59
PCDHA9-202ENST00000532602 C9orf47Q6ZRZ4 202 aa11.38□□□□□ -0.59
PCDHA9-202ENST00000532602 INAFM1C9JVW0 142 aa11.37□□□□□ -0.59
PCDHA9-202ENST00000532602 IGLL1P15814 213 aa11.37□□□□□ -0.59
PCDHA9-202ENST00000532602 PATE2Q6UY27 113 aa11.37□□□□□ -0.59
PCDHA9-202ENST00000532602 NDUFA1O15239 70 aa11.37□□□□□ -0.59
PCDHA9-202ENST00000532602 LINC01545Q5VT33 79 aa11.37□□□□□ -0.59
PCDHA9-202ENST00000532602 ZNF747Q9BV97 191 aa11.37□□□□□ -0.59
PCDHA9-202ENST00000532602 PCNX3Q9H6A9 2034 aa11.37□□□□□ -0.59
PCDHA9-202ENST00000532602 IGLV10-54A0A075B6I4 117 aa11.37□□□□□ -0.59
PCDHA9-202ENST00000532602 TRBV7-3A0A075B6L6 115 aa11.37□□□□□ -0.59
PCDHA9-202ENST00000532602 PRAC2D3DTV9 90 aa11.37□□□□□ -0.59
PCDHA9-202ENST00000532602 MUC22E2RYF6 1773 aaPredicted RBP11.37□□□□□ -0.59
PCDHA9-202ENST00000532602 TNCP24821 2201 aa11.37□□□□□ -0.59
PCDHA9-202ENST00000532602 LINC01548A6NM66 108 aa11.37□□□□□ -0.59
PCDHA9-202ENST00000532602 MED14OSP0DP75 135 aa11.37□□□□□ -0.59
PCDHA9-202ENST00000532602 hADV29S1A0JD25 119 aa11.36□□□□□ -0.59
PCDHA9-202ENST00000532602 IGHV4-31P0DP07 118 aa11.36□□□□□ -0.59
PCDHA9-202ENST00000532602 Q8N1Y9 231 aa11.36□□□□□ -0.59
PCDHA9-202ENST00000532602 DKK2Q9UBU2 259 aa11.36□□□□□ -0.59
PCDHA9-202ENST00000532602 PIEZO1Q92508 2521 aa11.36□□□□□ -0.59
PCDHA9-202ENST00000532602 FUSP35637 526 aaKnown RBP eCLIP11.36□□□□□ -0.59
PCDHA9-202ENST00000532602 C10orf91Q5T1B1 145 aa11.36□□□□□ -0.59
PCDHA9-202ENST00000532602 F8W1H4 67 aa11.36□□□□□ -0.59
PCDHA9-202ENST00000532602 RPL39LQ96EH5 51 aaKnown RBP11.36□□□□□ -0.59
PCDHA9-202ENST00000532602 ORMDL1Q9P0S3 153 aa11.36□□□□□ -0.59
PCDHA9-202ENST00000532602 FREM1Q5H8C1 2179 aa11.35□□□□□ -0.59
PCDHA9-202ENST00000532602 NDUFA11Q86Y39 141 aa11.35□□□□□ -0.59
PCDHA9-202ENST00000532602 TMEM61Q8N0U2 210 aa11.35□□□□□ -0.59
PCDHA9-202ENST00000532602 GTSF1LQ9H1H1 148 aa11.35□□□□□ -0.59
PCDHA9-202ENST00000532602 ZFP2Q6ZN57 461 aa11.35□□□□□ -0.59
PCDHA9-202ENST00000532602 UNQ9165/PRO28630Q6UXU0 137 aa11.35□□□□□ -0.59
PCDHA9-202ENST00000532602 CXCL5P42830 114 aa11.35□□□□□ -0.59
PCDHA9-202ENST00000532602 PROP1O75360 226 aa11.34□□□□□ -0.59
PCDHA9-202ENST00000532602 CFC1BP0CG36 223 aa11.34□□□□□ -0.59
PCDHA9-202ENST00000532602 CFC1P0CG37 223 aa11.34□□□□□ -0.59
PCDHA9-202ENST00000532602 LMO4P61968 165 aa11.34□□□□□ -0.59
PCDHA9-202ENST00000532602 PRO0255Q9UI72 69 aa11.34□□□□□ -0.59
PCDHA9-202ENST00000532602 LYPD6Q86Y78 171 aa11.33□□□□□ -0.6
PCDHA9-202ENST00000532602 DEFB105AQ8NG35 78 aa11.33□□□□□ -0.6
PCDHA9-202ENST00000532602 TMEM263Q8WUH6 116 aaKnown RBP11.33□□□□□ -0.6
PCDHA9-202ENST00000532602 WNK1Q9H4A3 2382 aa11.33□□□□□ -0.6
PCDHA9-202ENST00000532602 H0YGX0 51 aa11.33□□□□□ -0.6
PCDHA9-202ENST00000532602 Q6ZVH6 145 aa11.33□□□□□ -0.6
PCDHA9-202ENST00000532602 COX7B2Q8TF08 81 aa11.33□□□□□ -0.6
PCDHA9-202ENST00000532602 CITED1Q99966 193 aa11.33□□□□□ -0.6
PCDHA9-202ENST00000532602 NDUFS5O43920 106 aa11.32□□□□□ -0.6
PCDHA9-202ENST00000532602 LYPD6BQ8NI32 183 aa11.32□□□□□ -0.6
PCDHA9-202ENST00000532602 ETDBQ3ZM63 59 aa11.32□□□□□ -0.6
PCDHA9-202ENST00000532602 SND1-IT1Q9HBX3 110 aa11.32□□□□□ -0.6
PCDHA9-202ENST00000532602 TINCRA0A1B0GVN0 87 aa11.31□□□□□ -0.6
PCDHA9-202ENST00000532602 H3BQ85 93 aa11.31□□□□□ -0.6
PCDHA9-202ENST00000532602 MSRB1Q9NZV6 116 aa11.31□□□□□ -0.6
PCDHA9-202ENST00000532602 A0A0J9YXV3 536 aa11.31□□□□□ -0.6
PCDHA9-202ENST00000532602 UBE2AP49459 152 aa11.31□□□□□ -0.6
PCDHA9-202ENST00000532602 A0A0J9YX75 114 aa11.31□□□□□ -0.6
PCDHA9-202ENST00000532602 C4orf48Q5BLP8 95 aa11.31□□□□□ -0.6
PCDHA9-202ENST00000532602 ALPK3Q96L96 1907 aa11.31□□□□□ -0.6
PCDHA9-202ENST00000532602 ZNF124Q15973 351 aa11.31□□□□□ -0.6
PCDHA9-202ENST00000532602 DEFB125Q8N687 156 aa11.31□□□□□ -0.6
PCDHA9-202ENST00000532602 IGLL5B9A064 214 aa11.3□□□□□ -0.6
PCDHA9-202ENST00000532602 TRBV10-1A0A0K0K1A3 114 aa11.3□□□□□ -0.6
PCDHA9-202ENST00000532602 K7EP34 96 aa11.3□□□□□ -0.6
PCDHA9-202ENST00000532602 VSIG2Q96IQ7 327 aa11.3□□□□□ -0.6
PCDHA9-202ENST00000532602 OPRPNQ99935 248 aaPredicted RBP11.3□□□□□ -0.6
PCDHA9-202ENST00000532602 NDUFB1O75438 58 aa11.3□□□□□ -0.6
PCDHA9-202ENST00000532602 C14orf177Q52M58 125 aa11.3□□□□□ -0.6
PCDHA9-202ENST00000532602 C9orf153Q5TBE3 101 aa11.3□□□□□ -0.6
PCDHA9-202ENST00000532602 FAM167A-AS1Q96KT0 104 aa11.3□□□□□ -0.6
PCDHA9-202ENST00000532602 TRAV12-1A0A0B4J245 112 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms