RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 TRGV2A0A075B6R0 118 aa8.86□□□□□ -0.99
COPB1-208ENST00000532088 TRAV9-1A0A075B6T8 112 aa8.86□□□□□ -0.99
COPB1-208ENST00000532088 GAGE12BA1L429 117 aa8.86□□□□□ -0.99
COPB1-208ENST00000532088 RS1O15537 224 aa8.86□□□□□ -0.99
COPB1-208ENST00000532088 GAGE7O76087 117 aa8.86□□□□□ -0.99
COPB1-208ENST00000532088 GAGE12FP0CL80 117 aa8.86□□□□□ -0.99
COPB1-208ENST00000532088 GAGE12GP0CL81 117 aa8.86□□□□□ -0.99
COPB1-208ENST00000532088 GAGE12IP0CL82 117 aa8.86□□□□□ -0.99
COPB1-208ENST00000532088 DEFB130BP0DP73 79 aa8.86□□□□□ -0.99
COPB1-208ENST00000532088 DEFB130AP0DP74 79 aa8.86□□□□□ -0.99
COPB1-208ENST00000532088 ZFP2Q6ZN57 461 aa8.86□□□□□ -0.99
COPB1-208ENST00000532088 NUP35Q8NFH5 326 aa8.86□□□□□ -0.99
COPB1-208ENST00000532088 TPPP3Q9BW30 176 aa8.86□□□□□ -0.99
COPB1-208ENST00000532088 TENM3Q9P273 2699 aa8.86□□□□□ -0.99
COPB1-208ENST00000532088 MUC4Q99102 2169 aa8.85□□□□□ -0.99
COPB1-208ENST00000532088 A0A1B0GUT8 65 aa8.85□□□□□ -0.99
COPB1-208ENST00000532088 A0A1B0GW15 77 aa8.85□□□□□ -0.99
COPB1-208ENST00000532088 M0R381 172 aa8.85□□□□□ -0.99
COPB1-208ENST00000532088 RHODO00212 210 aa8.85□□□□□ -0.99
COPB1-208ENST00000532088 ATP5G1P05496 136 aa8.85□□□□□ -0.99
COPB1-208ENST00000532088 TRGC1P0CF51 173 aa8.85□□□□□ -0.99
COPB1-208ENST00000532088 ATP5L2Q7Z4Y8 100 aa8.85□□□□□ -0.99
COPB1-208ENST00000532088 PGLYRP4Q96LB8 373 aa8.85□□□□□ -0.99
COPB1-208ENST00000532088 WWC2-AS2Q96NR7 200 aa8.85□□□□□ -0.99
COPB1-208ENST00000532088 AP1S3Q96PC3 154 aa8.85□□□□□ -0.99
COPB1-208ENST00000532088 NTF3P20783 257 aa8.84□□□□□ -0.99
COPB1-208ENST00000532088 NANOS2P60321 138 aaKnown RBP8.84□□□□□ -0.99
COPB1-208ENST00000532088 SLAQ13239 276 aa8.84□□□□□ -0.99
COPB1-208ENST00000532088 RIGQ13278 110 aa8.84□□□□□ -0.99
COPB1-208ENST00000532088 CFAP126Q5VTH2 177 aa8.84□□□□□ -0.99
COPB1-208ENST00000532088 KCNIP4Q6PIL6 250 aa8.84□□□□□ -0.99
COPB1-208ENST00000532088 Q6ZTC4 211 aa8.84□□□□□ -0.99
COPB1-208ENST00000532088 OR4C5Q8NGB2 326 aa8.84□□□□□ -0.99
COPB1-208ENST00000532088 RPS10P5Q9NQ39 176 aa8.84□□□□□ -0.99
COPB1-208ENST00000532088 COL7A1Q02388 2944 aa8.83□□□□□ -1
COPB1-208ENST00000532088 TRAV10A0A0B4J240 114 aa8.83□□□□□ -1
COPB1-208ENST00000532088 S100PP25815 95 aa8.83□□□□□ -1
COPB1-208ENST00000532088 TWIST1Q15672 202 aa8.83□□□□□ -1
COPB1-208ENST00000532088 UFSP1Q6NVU6 142 aa8.83□□□□□ -1
COPB1-208ENST00000532088 POM121L12Q8N7R1 296 aa8.83□□□□□ -1
COPB1-208ENST00000532088 BTF3L4Q96K17 158 aa8.83□□□□□ -1
COPB1-208ENST00000532088 FAM210BQ96KR6 192 aa8.83□□□□□ -1
COPB1-208ENST00000532088 S100A8P05109 93 aa8.82□□□□□ -1
COPB1-208ENST00000532088 CRYGDP07320 174 aa8.82□□□□□ -1
COPB1-208ENST00000532088 S100A1P23297 94 aa8.82□□□□□ -1
COPB1-208ENST00000532088 SMIM15Q7Z3B0 74 aa8.82□□□□□ -1
COPB1-208ENST00000532088 GATD1Q8NB37 220 aa8.82□□□□□ -1
COPB1-208ENST00000532088 A0A1B0GXF2 115 aa8.81□□□□□ -1
COPB1-208ENST00000532088 H3BNG1 76 aa8.81□□□□□ -1
COPB1-208ENST00000532088 RASL11AQ6T310 242 aa8.81□□□□□ -1
COPB1-208ENST00000532088 FRZBQ92765 325 aa8.81□□□□□ -1
COPB1-208ENST00000532088 ZNF479Q96JC4 524 aa8.81□□□□□ -1
COPB1-208ENST00000532088 DPH3P1Q9H4G8 78 aa8.81□□□□□ -1
COPB1-208ENST00000532088 KIF25-AS1Q9Y6Z4 181 aa8.81□□□□□ -1
COPB1-208ENST00000532088 DEFB131BA0A096LNP1 70 aa8.8□□□□□ -1
COPB1-208ENST00000532088 MUC21A0A0G2JKD1 596 aa8.8□□□□□ -1
COPB1-208ENST00000532088 MUC21A0A140T8X8 626 aa8.8□□□□□ -1
COPB1-208ENST00000532088 TRBV6-4A0A1B0GX49 114 aa8.8□□□□□ -1
COPB1-208ENST00000532088 NUPR2A6NF83 97 aa8.8□□□□□ -1
COPB1-208ENST00000532088 SMIM17P0DL12 118 aa8.8□□□□□ -1
COPB1-208ENST00000532088 HBBP68871 147 aa8.8□□□□□ -1
COPB1-208ENST00000532088 FHL2Q14192 279 aa8.8□□□□□ -1
COPB1-208ENST00000532088 PHLDA1Q8WV24 401 aaPredicted RBP8.8□□□□□ -1
COPB1-208ENST00000532088 TMEM191AQ9H0A3 160 aa8.8□□□□□ -1
COPB1-208ENST00000532088 MSRB1Q9NZV6 116 aa8.8□□□□□ -1
COPB1-208ENST00000532088 PRO0255Q9UI72 69 aa8.8□□□□□ -1
COPB1-208ENST00000532088 DNAH7Q8WXX0 4024 aa8.8□□□□□ -1
COPB1-208ENST00000532088 STAB2Q8WWQ8 2551 aa8.79□□□□□ -1
COPB1-208ENST00000532088 TRGV4A0A0C4DH28 118 aa8.79□□□□□ -1
COPB1-208ENST00000532088 GATA1P15976 413 aaPredicted RBP8.79□□□□□ -1
COPB1-208ENST00000532088 HOXA5P20719 270 aa8.79□□□□□ -1
COPB1-208ENST00000532088 FAM3BP58499 235 aaPredicted RBP8.79□□□□□ -1
COPB1-208ENST00000532088 LINC00315P59091 139 aa8.79□□□□□ -1
COPB1-208ENST00000532088 RAB4BP61018 213 aa8.79□□□□□ -1
COPB1-208ENST00000532088 MUC7Q8TAX7 377 aa8.79□□□□□ -1
COPB1-208ENST00000532088 SAMD10Q9BYL1 202 aa8.79□□□□□ -1
COPB1-208ENST00000532088 JPT2Q9H910 190 aa8.79□□□□□ -1
COPB1-208ENST00000532088 F5H768 121 aa8.78□□□□□ -1
COPB1-208ENST00000532088 ATP6V1G1O75348 118 aa8.78□□□□□ -1
COPB1-208ENST00000532088 IGHV3-53P01767 116 aa8.78□□□□□ -1
COPB1-208ENST00000532088 EVI2AP22794 236 aa8.78□□□□□ -1
COPB1-208ENST00000532088 TCTAP57738 103 aa8.78□□□□□ -1
COPB1-208ENST00000532088 COX19Q49B96 90 aa8.78□□□□□ -1
COPB1-208ENST00000532088 CEMP1Q6PRD7 247 aaPredicted RBP8.78□□□□□ -1
COPB1-208ENST00000532088 ATRAIDQ6UW56 229 aa8.78□□□□□ -1
COPB1-208ENST00000532088 C14orf178Q8N769 122 aaPredicted RBP8.78□□□□□ -1
COPB1-208ENST00000532088 SMCO4Q9NRQ5 59 aa8.78□□□□□ -1
COPB1-208ENST00000532088 HHLA3Q9XRX5 114 aa8.78□□□□□ -1
COPB1-208ENST00000532088 DYNC2H1Q8NCM8 4307 aaKnown RBP8.77□□□□□ -1.01
COPB1-208ENST00000532088 TRBV24-1A0A075B6N3 115 aa8.77□□□□□ -1.01
COPB1-208ENST00000532088 A0A087WWL8 130 aa8.77□□□□□ -1.01
COPB1-208ENST00000532088 C3orf84H3BNL1 204 aa8.77□□□□□ -1.01
COPB1-208ENST00000532088 CRYBA4P53673 196 aa8.77□□□□□ -1.01
COPB1-208ENST00000532088 SSTP61278 116 aa8.77□□□□□ -1.01
COPB1-208ENST00000532088 RHOHQ15669 191 aa8.77□□□□□ -1.01
COPB1-208ENST00000532088 FAM74A4Q5TZK3 123 aa8.77□□□□□ -1.01
COPB1-208ENST00000532088 MRPL54Q6P161 138 aaKnown RBP8.77□□□□□ -1.01
COPB1-208ENST00000532088 KLK5Q9Y337 293 aaPredicted RBP8.77□□□□□ -1.01
COPB1-208ENST00000532088 NACAE9PAV3 2078 aa8.77□□□□□ -1.01
COPB1-208ENST00000532088 TRBV10-1A0A0K0K1A3 114 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms