RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 SSBP4Q9BWG4 385 aaPredicted RBP9.89□□□□□ -0.83
FOXR1-202ENST00000531539 EIF5A2Q9GZV4 153 aaKnown RBP9.89□□□□□ -0.83
FOXR1-202ENST00000531539 BIN3Q9NQY0 253 aa9.89□□□□□ -0.83
FOXR1-202ENST00000531539 DNAH17Q9UFH2 4485 aa9.88□□□□□ -0.83
FOXR1-202ENST00000531539 C19orf71A6NCJ1 209 aa9.88□□□□□ -0.83
FOXR1-202ENST00000531539 RHODO00212 210 aa9.88□□□□□ -0.83
FOXR1-202ENST00000531539 P01737 135 aa9.88□□□□□ -0.83
FOXR1-202ENST00000531539 RPS20P60866 119 aaKnown RBP9.88□□□□□ -0.83
FOXR1-202ENST00000531539 WFDC10BQ8IUB3 73 aa9.88□□□□□ -0.83
FOXR1-202ENST00000531539 OCC1Q8TAD7 63 aa9.88□□□□□ -0.83
FOXR1-202ENST00000531539 SMIM12Q96EX1 92 aa9.88□□□□□ -0.83
FOXR1-202ENST00000531539 TPPP3Q9BW30 176 aa9.88□□□□□ -0.83
FOXR1-202ENST00000531539 Q9UF83 564 aa9.88□□□□□ -0.83
FOXR1-202ENST00000531539 TRAV9-2A0A087WT02 112 aa9.87□□□□□ -0.83
FOXR1-202ENST00000531539 SNAI2O43623 268 aa9.87□□□□□ -0.83
FOXR1-202ENST00000531539 OR5AL1P0C617 328 aa9.87□□□□□ -0.83
FOXR1-202ENST00000531539 TOR2AQ5JU69 321 aa9.87□□□□□ -0.83
FOXR1-202ENST00000531539 NUDT10Q8NFP7 164 aa9.87□□□□□ -0.83
FOXR1-202ENST00000531539 NUDT11Q96G61 164 aa9.87□□□□□ -0.83
FOXR1-202ENST00000531539 LY96Q9Y6Y9 160 aa9.87□□□□□ -0.83
FOXR1-202ENST00000531539 FRAS1Q86XX4 4008 aa9.87□□□□□ -0.83
FOXR1-202ENST00000531539 TRAV8-6A0A0B4J262 113 aa9.86□□□□□ -0.83
FOXR1-202ENST00000531539 A0A1B0GVY2 172 aa9.86□□□□□ -0.83
FOXR1-202ENST00000531539 TMEM250H0YL14 139 aa9.86□□□□□ -0.83
FOXR1-202ENST00000531539 TIRAPP58753 221 aa9.86□□□□□ -0.83
FOXR1-202ENST00000531539 TNP2Q05952 138 aa9.86□□□□□ -0.83
FOXR1-202ENST00000531539 OR10J3Q5JRS4 329 aa9.86□□□□□ -0.83
FOXR1-202ENST00000531539 GTSF1LQ9H1H1 148 aa9.86□□□□□ -0.83
FOXR1-202ENST00000531539 DNAH2Q9P225 4427 aa9.85□□□□□ -0.83
FOXR1-202ENST00000531539 XKRY2A2RUG3 117 aa9.85□□□□□ -0.83
FOXR1-202ENST00000531539 F5H697 171 aa9.85□□□□□ -0.83
FOXR1-202ENST00000531539 EVI2AP22794 236 aa9.85□□□□□ -0.83
FOXR1-202ENST00000531539 FER1L6-AS1Q8NA97 138 aa9.85□□□□□ -0.83
FOXR1-202ENST00000531539 TNFRSF18Q9Y5U5 241 aa9.85□□□□□ -0.83
FOXR1-202ENST00000531539 K7EN84 100 aa9.84□□□□□ -0.83
FOXR1-202ENST00000531539 TEX261Q6UWH6 196 aa9.84□□□□□ -0.83
FOXR1-202ENST00000531539 FAM210AQ96ND0 272 aa9.84□□□□□ -0.83
FOXR1-202ENST00000531539 RNASE7Q9H1E1 156 aaKnown RBP9.84□□□□□ -0.83
FOXR1-202ENST00000531539 IGHV3-38A0A0C4DH36 116 aa9.83□□□□□ -0.84
FOXR1-202ENST00000531539 IGLC6P0CF74 106 aa9.83□□□□□ -0.84
FOXR1-202ENST00000531539 SMIM17P0DL12 118 aa9.83□□□□□ -0.84
FOXR1-202ENST00000531539 LINC00315P59091 139 aa9.83□□□□□ -0.84
FOXR1-202ENST00000531539 RAB4BP61018 213 aa9.83□□□□□ -0.84
FOXR1-202ENST00000531539 ZNF56Q15929 161 aa9.83□□□□□ -0.84
FOXR1-202ENST00000531539 LELP1Q5T871 98 aa9.83□□□□□ -0.84
FOXR1-202ENST00000531539 LYZL1Q6UWQ5 148 aa9.83□□□□□ -0.84
FOXR1-202ENST00000531539 MSRB1Q9NZV6 116 aa9.83□□□□□ -0.84
FOXR1-202ENST00000531539 F2Z2F3 143 aa9.82□□□□□ -0.84
FOXR1-202ENST00000531539 SRP19P09132 144 aaKnown RBP9.82□□□□□ -0.84
FOXR1-202ENST00000531539 DNAH10OSP0CZ25 163 aa9.82□□□□□ -0.84
FOXR1-202ENST00000531539 BTF3P20290 206 aaKnown RBP9.82□□□□□ -0.84
FOXR1-202ENST00000531539 CACNG7P62955 275 aa9.82□□□□□ -0.84
FOXR1-202ENST00000531539 GATCO43716 136 aaKnown RBP9.81□□□□□ -0.84
FOXR1-202ENST00000531539 IGHV3-30P01768 117 aa9.81□□□□□ -0.84
FOXR1-202ENST00000531539 IGHV3-33P01772 117 aa9.81□□□□□ -0.84
FOXR1-202ENST00000531539 IGHV3-30-3P0DP02 117 aa9.81□□□□□ -0.84
FOXR1-202ENST00000531539 IGHV3-30-5P0DP03 117 aa9.81□□□□□ -0.84
FOXR1-202ENST00000531539 RPL36AP83881 106 aaKnown RBP9.81□□□□□ -0.84
FOXR1-202ENST00000531539 RPL36ALQ969Q0 106 aaKnown RBP9.81□□□□□ -0.84
FOXR1-202ENST00000531539 SMIM7Q9BQ49 75 aa9.81□□□□□ -0.84
FOXR1-202ENST00000531539 RPP21Q9H633 154 aaKnown RBP9.81□□□□□ -0.84
FOXR1-202ENST00000531539 TRBV10-1A0A0K0K1A3 114 aa9.8□□□□□ -0.84
FOXR1-202ENST00000531539 ZNF727A8MUV8 499 aa9.8□□□□□ -0.84
FOXR1-202ENST00000531539 K7EP13 123 aa9.8□□□□□ -0.84
FOXR1-202ENST00000531539 LINC00694P0DN24 101 aa9.8□□□□□ -0.84
FOXR1-202ENST00000531539 NTF3P20783 257 aa9.8□□□□□ -0.84
FOXR1-202ENST00000531539 KIF25-AS1Q9Y6Z4 181 aa9.8□□□□□ -0.84
FOXR1-202ENST00000531539 TRBV7-3A0A075B6L6 115 aa9.79□□□□□ -0.84
FOXR1-202ENST00000531539 MGPP08493 103 aa9.79□□□□□ -0.84
FOXR1-202ENST00000531539 LINC01556Q5JQF7 62 aa9.79□□□□□ -0.84
FOXR1-202ENST00000531539 NFE4Q86UQ8 179 aa9.79□□□□□ -0.84
FOXR1-202ENST00000531539 C10orf126Q8N4M7 172 aa9.79□□□□□ -0.84
FOXR1-202ENST00000531539 AP1S3Q96PC3 154 aa9.79□□□□□ -0.84
FOXR1-202ENST00000531539 FAT2Q9NYQ8 4349 aa9.78□□□□□ -0.84
FOXR1-202ENST00000531539 A0A087WWC5 75 aa9.78□□□□□ -0.84
FOXR1-202ENST00000531539 NDUFS6O75380 124 aaKnown RBP9.78□□□□□ -0.84
FOXR1-202ENST00000531539 ERVFC1-1P60608 527 aa9.78□□□□□ -0.84
FOXR1-202ENST00000531539 UBE2D3P61077 147 aa9.78□□□□□ -0.84
FOXR1-202ENST00000531539 UBE2D2P62837 147 aa9.78□□□□□ -0.84
FOXR1-202ENST00000531539 TWIST1Q15672 202 aa9.78□□□□□ -0.84
FOXR1-202ENST00000531539 WDR73Q6P4I2 378 aa9.78□□□□□ -0.84
FOXR1-202ENST00000531539 NEXN-AS1Q8NBZ9 246 aa9.78□□□□□ -0.84
FOXR1-202ENST00000531539 PEA15Q15121 130 aa9.77□□□□□ -0.85
FOXR1-202ENST00000531539 Q6ZRN7 208 aaPredicted RBP9.77□□□□□ -0.85
FOXR1-202ENST00000531539 FAM231DQ6ZW35 169 aa9.77□□□□□ -0.85
FOXR1-202ENST00000531539 OR10G8Q8NGN5 311 aa9.77□□□□□ -0.85
FOXR1-202ENST00000531539 A8MWL6 223 aa9.76□□□□□ -0.85
FOXR1-202ENST00000531539 IBA57-AS1B1ANH7 110 aa9.76□□□□□ -0.85
FOXR1-202ENST00000531539 C9JQL5 133 aa9.76□□□□□ -0.85
FOXR1-202ENST00000531539 TRGC1P0CF51 173 aa9.76□□□□□ -0.85
FOXR1-202ENST00000531539 SRSF3P84103 164 aaKnown RBP9.76□□□□□ -0.85
FOXR1-202ENST00000531539 TMEM241Q24JQ0 296 aa9.76□□□□□ -0.85
FOXR1-202ENST00000531539 LINC01551Q86U37 167 aa9.76□□□□□ -0.85
FOXR1-202ENST00000531539 HECTD4Q9Y4D8 3996 aa9.75□□□□□ -0.85
FOXR1-202ENST00000531539 SPATA12Q7Z6I5 190 aa9.75□□□□□ -0.85
FOXR1-202ENST00000531539 Q8N3U1 123 aa9.75□□□□□ -0.85
FOXR1-202ENST00000531539 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.75□□□□□ -0.85
FOXR1-202ENST00000531539 GTSF1Q8WW33 167 aa9.75□□□□□ -0.85
FOXR1-202ENST00000531539 PGLYRP4Q96LB8 373 aa9.75□□□□□ -0.85
FOXR1-202ENST00000531539 DPH3P1Q9H4G8 78 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms