RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 FER1L6-AS1Q8NA97 138 aa10.15□□□□□ -0.78
CPSF1-206ENST00000531480 HYDINQ4G0P3 5121 aa10.15□□□□□ -0.78
CPSF1-206ENST00000531480 ALMS1Q8TCU4 4167 aa10.14□□□□□ -0.79
CPSF1-206ENST00000531480 TRAV4A0A0B4J268 109 aa10.14□□□□□ -0.79
CPSF1-206ENST00000531480 A0A1B0GUT8 65 aa10.14□□□□□ -0.79
CPSF1-206ENST00000531480 H3BNG1 76 aa10.14□□□□□ -0.79
CPSF1-206ENST00000531480 H3BVH4 76 aa10.14□□□□□ -0.79
CPSF1-206ENST00000531480 SNAI2O43623 268 aa10.14□□□□□ -0.79
CPSF1-206ENST00000531480 NXPH4O95158 308 aa10.14□□□□□ -0.79
CPSF1-206ENST00000531480 OR5AL1P0C617 328 aa10.14□□□□□ -0.79
CPSF1-206ENST00000531480 ARMS2P0C7Q2 107 aa10.14□□□□□ -0.79
CPSF1-206ENST00000531480 RAB5AP20339 215 aa10.14□□□□□ -0.79
CPSF1-206ENST00000531480 ZNF876PQ49A33 203 aa10.14□□□□□ -0.79
CPSF1-206ENST00000531480 GRIFINA4D1Z8 144 aa10.13□□□□□ -0.79
CPSF1-206ENST00000531480 COLCA2A8K830 154 aa10.13□□□□□ -0.79
CPSF1-206ENST00000531480 F5H768 121 aa10.13□□□□□ -0.79
CPSF1-206ENST00000531480 CIDEAO60543 219 aa10.13□□□□□ -0.79
CPSF1-206ENST00000531480 HTN3P15516 51 aa10.13□□□□□ -0.79
CPSF1-206ENST00000531480 RPS10P46783 165 aaKnown RBP10.13□□□□□ -0.79
CPSF1-206ENST00000531480 FHL2Q14192 279 aa10.13□□□□□ -0.79
CPSF1-206ENST00000531480 NUP35Q8NFH5 326 aa10.13□□□□□ -0.79
CPSF1-206ENST00000531480 EPPK1P58107 5090 aaKnown RBP10.13□□□□□ -0.79
CPSF1-206ENST00000531480 TMSB15BA0A087X1C1 80 aa10.12□□□□□ -0.79
CPSF1-206ENST00000531480 RS1O15537 224 aa10.12□□□□□ -0.79
CPSF1-206ENST00000531480 IGLC6P0CF74 106 aa10.12□□□□□ -0.79
CPSF1-206ENST00000531480 HBBP68871 147 aa10.12□□□□□ -0.79
CPSF1-206ENST00000531480 C15orf53Q8NAA6 179 aa10.12□□□□□ -0.79
CPSF1-206ENST00000531480 SYT8Q8NBV8 401 aa10.12□□□□□ -0.79
CPSF1-206ENST00000531480 ZNF479Q96JC4 524 aa10.12□□□□□ -0.79
CPSF1-206ENST00000531480 TPPP3Q9BW30 176 aa10.12□□□□□ -0.79
CPSF1-206ENST00000531480 GNB1LQ9BYB4 327 aa10.12□□□□□ -0.79
CPSF1-206ENST00000531480 PHLDA3Q9Y5J5 127 aa10.12□□□□□ -0.79
CPSF1-206ENST00000531480 C1orf196B1AJZ1 125 aa10.11□□□□□ -0.79
CPSF1-206ENST00000531480 HLA-DQA1P01909 254 aa10.11□□□□□ -0.79
CPSF1-206ENST00000531480 SLAQ13239 276 aa10.11□□□□□ -0.79
CPSF1-206ENST00000531480 CFAP126Q5VTH2 177 aa10.11□□□□□ -0.79
CPSF1-206ENST00000531480 DMRTA1Q5VZB9 504 aa10.11□□□□□ -0.79
CPSF1-206ENST00000531480 UFSP1Q6NVU6 142 aa10.11□□□□□ -0.79
CPSF1-206ENST00000531480 VSIG2Q96IQ7 327 aa10.11□□□□□ -0.79
CPSF1-206ENST00000531480 PGLYRP4Q96LB8 373 aa10.11□□□□□ -0.79
CPSF1-206ENST00000531480 TGIF2-C20orf24A0A0A6YYL0 155 aa10.1□□□□□ -0.79
CPSF1-206ENST00000531480 A8MWV9 139 aa10.1□□□□□ -0.79
CPSF1-206ENST00000531480 TRGC1P0CF51 173 aa10.1□□□□□ -0.79
CPSF1-206ENST00000531480 RAB4BP61018 213 aa10.1□□□□□ -0.79
CPSF1-206ENST00000531480 RAB5BP61020 215 aa10.1□□□□□ -0.79
CPSF1-206ENST00000531480 SPANXN1Q5VSR9 72 aa10.1□□□□□ -0.79
CPSF1-206ENST00000531480 LGALS9CQ6DKI2 356 aa10.1□□□□□ -0.79
CPSF1-206ENST00000531480 OR4C5Q8NGB2 326 aa10.1□□□□□ -0.79
CPSF1-206ENST00000531480 LINC00476Q8WZB0 136 aa10.1□□□□□ -0.79
CPSF1-206ENST00000531480 PRO0255Q9UI72 69 aa10.1□□□□□ -0.79
CPSF1-206ENST00000531480 TRAPPC1Q9Y5R8 145 aa10.1□□□□□ -0.79
CPSF1-206ENST00000531480 TRAV26-1A0A087WT03 109 aa10.09□□□□□ -0.79
CPSF1-206ENST00000531480 CTRLP40313 264 aa10.09□□□□□ -0.79
CPSF1-206ENST00000531480 CRYBA4P53673 196 aa10.09□□□□□ -0.79
CPSF1-206ENST00000531480 TWIST1Q15672 202 aa10.09□□□□□ -0.79
CPSF1-206ENST00000531480 LYZL1Q6UWQ5 148 aa10.09□□□□□ -0.79
CPSF1-206ENST00000531480 ZFP2Q6ZN57 461 aa10.09□□□□□ -0.79
CPSF1-206ENST00000531480 ZFP82Q8N141 532 aa10.09□□□□□ -0.79
CPSF1-206ENST00000531480 YPEL4Q96NS1 127 aa10.09□□□□□ -0.79
CPSF1-206ENST00000531480 VPS13DQ5THJ4 4388 aa10.09□□□□□ -0.79
CPSF1-206ENST00000531480 IGHV3-53P01767 116 aa10.08□□□□□ -0.8
CPSF1-206ENST00000531480 GATA1P15976 413 aaPredicted RBP10.08□□□□□ -0.8
CPSF1-206ENST00000531480 OR10AG1Q8NH19 301 aa10.08□□□□□ -0.8
CPSF1-206ENST00000531480 GTSF1Q8WW33 167 aa10.08□□□□□ -0.8
CPSF1-206ENST00000531480 FRZBQ92765 325 aa10.08□□□□□ -0.8
CPSF1-206ENST00000531480 CNFNQ9BYD5 112 aa10.08□□□□□ -0.8
CPSF1-206ENST00000531480 HHLA3Q9XRX5 114 aa10.08□□□□□ -0.8
CPSF1-206ENST00000531480 BIRC6Q9NR09 4857 aa10.08□□□□□ -0.8
CPSF1-206ENST00000531480 SMIM17P0DL12 118 aa10.07□□□□□ -0.8
CPSF1-206ENST00000531480 GZMBP10144 247 aa10.07□□□□□ -0.8
CPSF1-206ENST00000531480 MRPL54Q6P161 138 aaKnown RBP10.07□□□□□ -0.8
CPSF1-206ENST00000531480 JPT2Q9H910 190 aa10.07□□□□□ -0.8
CPSF1-206ENST00000531480 TRGV4A0A0C4DH28 118 aa10.06□□□□□ -0.8
CPSF1-206ENST00000531480 APCSP02743 223 aa10.06□□□□□ -0.8
CPSF1-206ENST00000531480 CRYGDP07320 174 aa10.06□□□□□ -0.8
CPSF1-206ENST00000531480 SAMD10Q9BYL1 202 aa10.06□□□□□ -0.8
CPSF1-206ENST00000531480 A0A096LPF7 62 aa10.05□□□□□ -0.8
CPSF1-206ENST00000531480 A0A0J9YY99 117 aa10.05□□□□□ -0.8
CPSF1-206ENST00000531480 TRBV6-4A0A1B0GX49 114 aa10.05□□□□□ -0.8
CPSF1-206ENST00000531480 M0R381 172 aa10.05□□□□□ -0.8
CPSF1-206ENST00000531480 RHODO00212 210 aa10.05□□□□□ -0.8
CPSF1-206ENST00000531480 PAX4O43316 350 aa10.05□□□□□ -0.8
CPSF1-206ENST00000531480 PPP1R17O96001 155 aa10.05□□□□□ -0.8
CPSF1-206ENST00000531480 CAMPP49913 170 aa10.05□□□□□ -0.8
CPSF1-206ENST00000531480 FABP9Q0Z7S8 132 aa10.05□□□□□ -0.8
CPSF1-206ENST00000531480 PPBPP02775 128 aa10.04□□□□□ -0.8
CPSF1-206ENST00000531480 S100A6P06703 90 aa10.04□□□□□ -0.8
CPSF1-206ENST00000531480 P0DMU3 169 aa10.04□□□□□ -0.8
CPSF1-206ENST00000531480 FAM231AP0DMU4 169 aa10.04□□□□□ -0.8
CPSF1-206ENST00000531480 FAM231CP0DMU5 169 aa10.04□□□□□ -0.8
CPSF1-206ENST00000531480 NTF3P20783 257 aa10.04□□□□□ -0.8
CPSF1-206ENST00000531480 SLC25A29Q8N8R3 303 aa10.04□□□□□ -0.8
CPSF1-206ENST00000531480 AP1S3Q96PC3 154 aa10.04□□□□□ -0.8
CPSF1-206ENST00000531480 KIF25-AS1Q9Y6Z4 181 aa10.04□□□□□ -0.8
CPSF1-206ENST00000531480 A0A1B0GXF2 115 aa10.03□□□□□ -0.8
CPSF1-206ENST00000531480 KMT2AQ03164 3969 aa10.03□□□□□ -0.8
CPSF1-206ENST00000531480 TMEM191AQ9H0A3 160 aa10.03□□□□□ -0.8
CPSF1-206ENST00000531480 MRPL18Q9H0U6 180 aaKnown RBP10.03□□□□□ -0.8
CPSF1-206ENST00000531480 K7EQD1 137 aa10.02□□□□□ -0.81
CPSF1-206ENST00000531480 NUDT3O95989 172 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms