RNA–Protein interactions for RNA: ENST00000531385.1

PTPRU-211, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-211ENST00000531385 LRP1BQ9NZR2 4599 aa12.74□□□□□ -0.37
PTPRU-211ENST00000531385 PDE6DO43924 150 aa12.73□□□□□ -0.37
PTPRU-211ENST00000531385 GZMBP10144 247 aa12.73□□□□□ -0.37
PTPRU-211ENST00000531385 SSTP61278 116 aa12.73□□□□□ -0.37
PTPRU-211ENST00000531385 SH2D6Q7Z4S9 175 aa12.73□□□□□ -0.37
PTPRU-211ENST00000531385 SFRP2Q96HF1 295 aa12.73□□□□□ -0.37
PTPRU-211ENST00000531385 DNAH5Q8TE73 4624 aa12.72□□□□□ -0.37
PTPRU-211ENST00000531385 RHODO00212 210 aa12.72□□□□□ -0.37
PTPRU-211ENST00000531385 CRYGDP07320 174 aa12.72□□□□□ -0.37
PTPRU-211ENST00000531385 LINC00694P0DN24 101 aa12.72□□□□□ -0.37
PTPRU-211ENST00000531385 GNG4P50150 75 aa12.72□□□□□ -0.37
PTPRU-211ENST00000531385 ATP6V0E2Q8NHE4 81 aa12.72□□□□□ -0.37
PTPRU-211ENST00000531385 CXCL1P09341 107 aa12.71□□□□□ -0.37
PTPRU-211ENST00000531385 DNAH10OSP0CZ25 163 aa12.71□□□□□ -0.37
PTPRU-211ENST00000531385 MED14OSP0DP75 135 aa12.71□□□□□ -0.37
PTPRU-211ENST00000531385 TIRAPP58753 221 aa12.71□□□□□ -0.37
PTPRU-211ENST00000531385 Q6ZRN7 208 aaPredicted RBP12.71□□□□□ -0.37
PTPRU-211ENST00000531385 RBFOX3A6NFN3 312 aa12.7□□□□□ -0.38
PTPRU-211ENST00000531385 SNAI2O43623 268 aa12.7□□□□□ -0.38
PTPRU-211ENST00000531385 OR10J3Q5JRS4 329 aa12.7□□□□□ -0.38
PTPRU-211ENST00000531385 C19orf71A6NCJ1 209 aa12.69□□□□□ -0.38
PTPRU-211ENST00000531385 OR2D3Q8NGH3 330 aa12.69□□□□□ -0.38
PTPRU-211ENST00000531385 TPPP3Q9BW30 176 aa12.69□□□□□ -0.38
PTPRU-211ENST00000531385 GTSF1LQ9H1H1 148 aa12.69□□□□□ -0.38
PTPRU-211ENST00000531385 IGHV3-38A0A0C4DH36 116 aa12.68□□□□□ -0.38
PTPRU-211ENST00000531385 EVI2AP22794 236 aa12.68□□□□□ -0.38
PTPRU-211ENST00000531385 BLOC1S1P78537 153 aa12.68□□□□□ -0.38
PTPRU-211ENST00000531385 LELP1Q5T871 98 aa12.68□□□□□ -0.38
PTPRU-211ENST00000531385 SPANXN1Q5VSR9 72 aa12.68□□□□□ -0.38
PTPRU-211ENST00000531385 Q8N3U1 123 aa12.68□□□□□ -0.38
PTPRU-211ENST00000531385 SSBP4Q9BWG4 385 aaPredicted RBP12.68□□□□□ -0.38
PTPRU-211ENST00000531385 IGHV3-30P01768 117 aa12.67□□□□□ -0.38
PTPRU-211ENST00000531385 IGHV3-33P01772 117 aa12.67□□□□□ -0.38
PTPRU-211ENST00000531385 OR5AL1P0C617 328 aa12.67□□□□□ -0.38
PTPRU-211ENST00000531385 IGHV3-30-3P0DP02 117 aa12.67□□□□□ -0.38
PTPRU-211ENST00000531385 IGHV3-30-5P0DP03 117 aa12.67□□□□□ -0.38
PTPRU-211ENST00000531385 DAZAP1Q96EP5 407 aaKnown RBP12.67□□□□□ -0.38
PTPRU-211ENST00000531385 TRAV9-2A0A087WT02 112 aa12.66□□□□□ -0.38
PTPRU-211ENST00000531385 TRAV8-6A0A0B4J262 113 aa12.66□□□□□ -0.38
PTPRU-211ENST00000531385 TAGLN2P37802 199 aaKnown RBP12.66□□□□□ -0.38
PTPRU-211ENST00000531385 ZNF56Q15929 161 aa12.66□□□□□ -0.38
PTPRU-211ENST00000531385 SPATA12Q7Z6I5 190 aa12.66□□□□□ -0.38
PTPRU-211ENST00000531385 MSRB1Q9NZV6 116 aa12.66□□□□□ -0.38
PTPRU-211ENST00000531385 C16orf90A8MZG2 172 aa12.65□□□□□ -0.38
PTPRU-211ENST00000531385 K7EN84 100 aa12.65□□□□□ -0.38
PTPRU-211ENST00000531385 P01737 135 aa12.65□□□□□ -0.38
PTPRU-211ENST00000531385 IGLC6P0CF74 106 aa12.65□□□□□ -0.38
PTPRU-211ENST00000531385 BTF3P20290 206 aaKnown RBP12.65□□□□□ -0.38
PTPRU-211ENST00000531385 FUSP35637 526 aaKnown RBP eCLIP12.65□□□□□ -0.38
PTPRU-211ENST00000531385 KRTAP10-2P60368 255 aa12.65□□□□□ -0.38
PTPRU-211ENST00000531385 LINC01556Q5JQF7 62 aa12.65□□□□□ -0.38
PTPRU-211ENST00000531385 TOR2AQ5JU69 321 aa12.65□□□□□ -0.38
PTPRU-211ENST00000531385 FER1L6-AS1Q8NA97 138 aa12.65□□□□□ -0.38
PTPRU-211ENST00000531385 LYPD6BQ8NI32 183 aa12.65□□□□□ -0.38
PTPRU-211ENST00000531385 SMIM12Q96EX1 92 aa12.65□□□□□ -0.38
PTPRU-211ENST00000531385 CEBPGP53567 150 aa12.64□□□□□ -0.39
PTPRU-211ENST00000531385 RYR1P21817 5038 aa12.64□□□□□ -0.39
PTPRU-211ENST00000531385 NUDT10Q8NFP7 164 aa12.63□□□□□ -0.39
PTPRU-211ENST00000531385 OCC1Q8TAD7 63 aa12.63□□□□□ -0.39
PTPRU-211ENST00000531385 NUDT11Q96G61 164 aa12.63□□□□□ -0.39
PTPRU-211ENST00000531385 RNASE7Q9H1E1 156 aaKnown RBP12.63□□□□□ -0.39
PTPRU-211ENST00000531385 APOBP04114 4563 aaKnown RBP12.62□□□□□ -0.39
PTPRU-211ENST00000531385 HSPG2P98160 4391 aa12.62□□□□□ -0.39
PTPRU-211ENST00000531385 RPS20P60866 119 aaKnown RBP12.62□□□□□ -0.39
PTPRU-211ENST00000531385 C10orf126Q8N4M7 172 aa12.62□□□□□ -0.39
PTPRU-211ENST00000531385 Q9HAA7 133 aa12.62□□□□□ -0.39
PTPRU-211ENST00000531385 RAB4BP61018 213 aa12.61□□□□□ -0.39
PTPRU-211ENST00000531385 AP1S3Q96PC3 154 aa12.61□□□□□ -0.39
PTPRU-211ENST00000531385 KIF25-AS1Q9Y6Z4 181 aa12.61□□□□□ -0.39
PTPRU-211ENST00000531385 TRBV10-1A0A0K0K1A3 114 aa12.6□□□□□ -0.39
PTPRU-211ENST00000531385 F5H697 171 aa12.6□□□□□ -0.39
PTPRU-211ENST00000531385 TMEM250H0YL14 139 aa12.6□□□□□ -0.39
PTPRU-211ENST00000531385 MGPP08493 103 aa12.6□□□□□ -0.39
PTPRU-211ENST00000531385 UBE2D3P61077 147 aa12.6□□□□□ -0.39
PTPRU-211ENST00000531385 UBE2D2P62837 147 aa12.6□□□□□ -0.39
PTPRU-211ENST00000531385 RPL36AP83881 106 aaKnown RBP12.6□□□□□ -0.39
PTPRU-211ENST00000531385 LYZL1Q6UWQ5 148 aa12.6□□□□□ -0.39
PTPRU-211ENST00000531385 NFE4Q86UQ8 179 aa12.6□□□□□ -0.39
PTPRU-211ENST00000531385 NEXN-AS1Q8NBZ9 246 aa12.6□□□□□ -0.39
PTPRU-211ENST00000531385 RPL36ALQ969Q0 106 aaKnown RBP12.6□□□□□ -0.39
PTPRU-211ENST00000531385 EIF5A2Q9GZV4 153 aaKnown RBP12.6□□□□□ -0.39
PTPRU-211ENST00000531385 BIN3Q9NQY0 253 aa12.6□□□□□ -0.39
PTPRU-211ENST00000531385 IBA57-AS1B1ANH7 110 aa12.59□□□□□ -0.39
PTPRU-211ENST00000531385 RPP21Q9H633 154 aaKnown RBP12.59□□□□□ -0.39
PTPRU-211ENST00000531385 TRBV7-3A0A075B6L6 115 aa12.58□□□□□ -0.4
PTPRU-211ENST00000531385 XKRY2A2RUG3 117 aa12.58□□□□□ -0.4
PTPRU-211ENST00000531385 K7EP13 123 aa12.58□□□□□ -0.4
PTPRU-211ENST00000531385 SMIM17P0DL12 118 aa12.58□□□□□ -0.4
PTPRU-211ENST00000531385 ERVFC1-1P60608 527 aa12.58□□□□□ -0.4
PTPRU-211ENST00000531385 DAZ4Q86SG3 579 aaKnown RBP12.58□□□□□ -0.4
PTPRU-211ENST00000531385 FAM210AQ96ND0 272 aa12.58□□□□□ -0.4
PTPRU-211ENST00000531385 DAZ3Q9NR90 486 aaKnown RBP12.58□□□□□ -0.4
PTPRU-211ENST00000531385 OR10G8Q8NGN5 311 aa12.57□□□□□ -0.4
PTPRU-211ENST00000531385 A0A087WTM6 91 aa12.56□□□□□ -0.4
PTPRU-211ENST00000531385 A0A087WWC5 75 aa12.56□□□□□ -0.4
PTPRU-211ENST00000531385 CTRLP40313 264 aa12.56□□□□□ -0.4
PTPRU-211ENST00000531385 CACNG7P62955 275 aa12.56□□□□□ -0.4
PTPRU-211ENST00000531385 SRP19P09132 144 aaKnown RBP12.55□□□□□ -0.4
PTPRU-211ENST00000531385 SUMO4Q6EEV6 95 aa12.55□□□□□ -0.4
PTPRU-211ENST00000531385 SMIM7Q9BQ49 75 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms