RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 TPPP3Q9BW30 176 aa9.8□□□□□ -0.84
CTSB-217ENST00000530296 RNASE7Q9H1E1 156 aaKnown RBP9.8□□□□□ -0.84
CTSB-217ENST00000530296 IGLC6P0CF74 106 aa9.79□□□□□ -0.84
CTSB-217ENST00000530296 SRSF3P84103 164 aaKnown RBP9.79□□□□□ -0.84
CTSB-217ENST00000530296 IFITM2Q01629 132 aa9.79□□□□□ -0.84
CTSB-217ENST00000530296 WDR73Q6P4I2 378 aa9.79□□□□□ -0.84
CTSB-217ENST00000530296 OR10AG1Q8NH19 301 aa9.79□□□□□ -0.84
CTSB-217ENST00000530296 A0A096LPF7 62 aa9.78□□□□□ -0.84
CTSB-217ENST00000530296 A0A1B0GVY2 172 aa9.78□□□□□ -0.84
CTSB-217ENST00000530296 SMIM17P0DL12 118 aa9.78□□□□□ -0.84
CTSB-217ENST00000530296 SRIP30626 198 aa9.78□□□□□ -0.84
CTSB-217ENST00000530296 NEGR1Q7Z3B1 354 aa9.78□□□□□ -0.84
CTSB-217ENST00000530296 AP1S3Q96PC3 154 aa9.78□□□□□ -0.84
CTSB-217ENST00000530296 OSTCQ9NRP0 149 aa9.78□□□□□ -0.84
CTSB-217ENST00000530296 KIAA1109Q2LD37 5005 aa9.78□□□□□ -0.84
CTSB-217ENST00000530296 VPS13DQ5THJ4 4388 aa9.77□□□□□ -0.84
CTSB-217ENST00000530296 IGHV3-73A0A0B4J1V6 119 aa9.77□□□□□ -0.85
CTSB-217ENST00000530296 PRSS29PA6NIE9 313 aa9.77□□□□□ -0.85
CTSB-217ENST00000530296 C9JQL5 133 aa9.77□□□□□ -0.85
CTSB-217ENST00000530296 GZMBP10144 247 aa9.77□□□□□ -0.85
CTSB-217ENST00000530296 GYPEP15421 78 aa9.77□□□□□ -0.85
CTSB-217ENST00000530296 FAM74A4Q5TZK3 123 aa9.77□□□□□ -0.85
CTSB-217ENST00000530296 UQCC3Q6UW78 93 aa9.77□□□□□ -0.85
CTSB-217ENST00000530296 SLC25A29Q8N8R3 303 aa9.77□□□□□ -0.85
CTSB-217ENST00000530296 FAM231BA6NCW3 169 aa9.76□□□□□ -0.85
CTSB-217ENST00000530296 K7EQD1 137 aa9.76□□□□□ -0.85
CTSB-217ENST00000530296 TRGC1P0CF51 173 aa9.76□□□□□ -0.85
CTSB-217ENST00000530296 CTRLP40313 264 aa9.76□□□□□ -0.85
CTSB-217ENST00000530296 ADIRFQ15847 76 aa9.76□□□□□ -0.85
CTSB-217ENST00000530296 LYZL1Q6UWQ5 148 aa9.76□□□□□ -0.85
CTSB-217ENST00000530296 BORCS7Q96B45 105 aa9.76□□□□□ -0.85
CTSB-217ENST00000530296 GFRA4Q9GZZ7 299 aa9.76□□□□□ -0.85
CTSB-217ENST00000530296 PKHD1P08F94 4074 aa9.76□□□□□ -0.85
CTSB-217ENST00000530296 A0A087WWL8 130 aa9.75□□□□□ -0.85
CTSB-217ENST00000530296 CRYGDP07320 174 aa9.75□□□□□ -0.85
CTSB-217ENST00000530296 RAB4BP61018 213 aa9.75□□□□□ -0.85
CTSB-217ENST00000530296 RPL23P62829 140 aaKnown RBP9.75□□□□□ -0.85
CTSB-217ENST00000530296 UFSP1Q6NVU6 142 aa9.75□□□□□ -0.85
CTSB-217ENST00000530296 ISOC2Q96AB3 205 aa9.75□□□□□ -0.85
CTSB-217ENST00000530296 CNFNQ9BYD5 112 aa9.75□□□□□ -0.85
CTSB-217ENST00000530296 JPT2Q9H910 190 aa9.75□□□□□ -0.85
CTSB-217ENST00000530296 RYR1P21817 5038 aa9.74□□□□□ -0.85
CTSB-217ENST00000530296 TRBV10-1A0A0K0K1A3 114 aa9.74□□□□□ -0.85
CTSB-217ENST00000530296 PNRC1Q12796 327 aaPredicted RBP9.74□□□□□ -0.85
CTSB-217ENST00000530296 SMIM15Q7Z3B0 74 aa9.74□□□□□ -0.85
CTSB-217ENST00000530296 OR10G8Q8NGN5 311 aa9.74□□□□□ -0.85
CTSB-217ENST00000530296 TSKUQ8WUA8 353 aa9.74□□□□□ -0.85
CTSB-217ENST00000530296 SAMD10Q9BYL1 202 aa9.74□□□□□ -0.85
CTSB-217ENST00000530296 MRPS16Q9Y3D3 137 aaKnown RBP9.74□□□□□ -0.85
CTSB-217ENST00000530296 MUC21A0A0G2JKD1 596 aa9.73□□□□□ -0.85
CTSB-217ENST00000530296 MUC21A0A140T8X8 626 aa9.73□□□□□ -0.85
CTSB-217ENST00000530296 NTF3P20783 257 aa9.73□□□□□ -0.85
CTSB-217ENST00000530296 FOXA3P55318 350 aaPredicted RBP9.73□□□□□ -0.85
CTSB-217ENST00000530296 SSTP61278 116 aa9.73□□□□□ -0.85
CTSB-217ENST00000530296 ZNF56Q15929 161 aa9.73□□□□□ -0.85
CTSB-217ENST00000530296 ESRGQ1W209 222 aa9.73□□□□□ -0.85
CTSB-217ENST00000530296 C14orf178Q8N769 122 aaPredicted RBP9.73□□□□□ -0.85
CTSB-217ENST00000530296 UPK3BQ9BT76 320 aa9.73□□□□□ -0.85
CTSB-217ENST00000530296 LINC00588Q9Y4M8 146 aa9.73□□□□□ -0.85
CTSB-217ENST00000530296 NACAE9PAV3 2078 aa9.72□□□□□ -0.85
CTSB-217ENST00000530296 F5H697 171 aa9.72□□□□□ -0.85
CTSB-217ENST00000530296 H7C1H1 209 aa9.72□□□□□ -0.85
CTSB-217ENST00000530296 TIRAPP58753 221 aa9.72□□□□□ -0.85
CTSB-217ENST00000530296 TWIST1Q15672 202 aa9.72□□□□□ -0.85
CTSB-217ENST00000530296 LYPD5Q6UWN5 251 aa9.72□□□□□ -0.85
CTSB-217ENST00000530296 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.72□□□□□ -0.85
CTSB-217ENST00000530296 PPP1R2P9O14990 202 aa9.71□□□□□ -0.86
CTSB-217ENST00000530296 RTL8CO15255 209 aa9.71□□□□□ -0.86
CTSB-217ENST00000530296 RPL36AP83881 106 aaKnown RBP9.71□□□□□ -0.86
CTSB-217ENST00000530296 ATP6V0E2Q8NHE4 81 aa9.71□□□□□ -0.86
CTSB-217ENST00000530296 ZNRF2Q8NHG8 242 aa9.71□□□□□ -0.86
CTSB-217ENST00000530296 GTSF1Q8WW33 167 aa9.71□□□□□ -0.86
CTSB-217ENST00000530296 RPL36ALQ969Q0 106 aaKnown RBP9.71□□□□□ -0.86
CTSB-217ENST00000530296 DPH3P1Q9H4G8 78 aa9.71□□□□□ -0.86
CTSB-217ENST00000530296 V9GYV3 84 aa9.71□□□□□ -0.86
CTSB-217ENST00000530296 LOC100131303A0A0U1RQF7 123 aa9.7□□□□□ -0.86
CTSB-217ENST00000530296 HIGD1CA8MV81 97 aa9.7□□□□□ -0.86
CTSB-217ENST00000530296 TTC32Q5I0X7 151 aa9.7□□□□□ -0.86
CTSB-217ENST00000530296 Q6ZSN1 163 aa9.7□□□□□ -0.86
CTSB-217ENST00000530296 PGLYRP4Q96LB8 373 aa9.7□□□□□ -0.86
CTSB-217ENST00000530296 Q9H8V8 135 aa9.7□□□□□ -0.86
CTSB-217ENST00000530296 NAT8BQ9UHF3 227 aa9.7□□□□□ -0.86
CTSB-217ENST00000530296 KIF25-AS1Q9Y6Z4 181 aa9.7□□□□□ -0.86
CTSB-217ENST00000530296 TRBV7-3A0A075B6L6 115 aa9.69□□□□□ -0.86
CTSB-217ENST00000530296 A0A1B0GUT8 65 aa9.69□□□□□ -0.86
CTSB-217ENST00000530296 GTSF1LQ9H1H1 148 aa9.69□□□□□ -0.86
CTSB-217ENST00000530296 MSRB1Q9NZV6 116 aa9.69□□□□□ -0.86
CTSB-217ENST00000530296 A0A087WWC5 75 aa9.68□□□□□ -0.86
CTSB-217ENST00000530296 TRAV8-6A0A0B4J262 113 aa9.68□□□□□ -0.86
CTSB-217ENST00000530296 LINC00862A6NCI5 91 aa9.68□□□□□ -0.86
CTSB-217ENST00000530296 GAGE12JA6NER3 117 aa9.68□□□□□ -0.86
CTSB-217ENST00000530296 K7EP13 123 aa9.68□□□□□ -0.86
CTSB-217ENST00000530296 MT-ND4LP03901 98 aa9.68□□□□□ -0.86
CTSB-217ENST00000530296 MGPP08493 103 aa9.68□□□□□ -0.86
CTSB-217ENST00000530296 EVI2AP22794 236 aa9.68□□□□□ -0.86
CTSB-217ENST00000530296 GAGE1Q13065 139 aa9.68□□□□□ -0.86
CTSB-217ENST00000530296 GAGE4Q13068 117 aa9.68□□□□□ -0.86
CTSB-217ENST00000530296 GAGE5Q13069 117 aa9.68□□□□□ -0.86
CTSB-217ENST00000530296 RIGQ13278 110 aa9.68□□□□□ -0.86
CTSB-217ENST00000530296 GAGE13Q4V321 117 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms