RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 A6NJY4 79 aa6.2□□□□□ -1.42
CSTF3-208ENST00000528865 P0DMU3 169 aa6.2□□□□□ -1.42
CSTF3-208ENST00000528865 FAM231AP0DMU4 169 aa6.2□□□□□ -1.42
CSTF3-208ENST00000528865 FAM231CP0DMU5 169 aa6.2□□□□□ -1.42
CSTF3-208ENST00000528865 SNRPD3P62318 126 aaKnown RBP6.2□□□□□ -1.42
CSTF3-208ENST00000528865 WFDC2Q14508 124 aa6.2□□□□□ -1.42
CSTF3-208ENST00000528865 AMTNQ6UX39 209 aa6.2□□□□□ -1.42
CSTF3-208ENST00000528865 TRPT1Q86TN4 253 aaKnown RBP6.2□□□□□ -1.42
CSTF3-208ENST00000528865 PTH2Q96A98 100 aa6.2□□□□□ -1.42
CSTF3-208ENST00000528865 MDFICQ9P1T7 246 aa6.2□□□□□ -1.42
CSTF3-208ENST00000528865 AGRNO00468 2067 aa6.2□□□□□ -1.42
CSTF3-208ENST00000528865 A0A087WWL8 130 aa6.19□□□□□ -1.42
CSTF3-208ENST00000528865 F5H697 171 aa6.19□□□□□ -1.42
CSTF3-208ENST00000528865 FSHBP01225 129 aa6.19□□□□□ -1.42
CSTF3-208ENST00000528865 IGHV4-59P01825 116 aa6.19□□□□□ -1.42
CSTF3-208ENST00000528865 ZNF688P0C7X2 276 aa6.19□□□□□ -1.42
CSTF3-208ENST00000528865 UBE2D3P61077 147 aa6.19□□□□□ -1.42
CSTF3-208ENST00000528865 UBE2D2P62837 147 aa6.19□□□□□ -1.42
CSTF3-208ENST00000528865 RPL24P83731 157 aaKnown RBP6.19□□□□□ -1.42
CSTF3-208ENST00000528865 TMEM95Q3KNT9 176 aa6.19□□□□□ -1.42
CSTF3-208ENST00000528865 CD300EQ496F6 205 aaPredicted RBP6.19□□□□□ -1.42
CSTF3-208ENST00000528865 GAGE13Q4V321 117 aa6.19□□□□□ -1.42
CSTF3-208ENST00000528865 Q8N1Y9 231 aa6.19□□□□□ -1.42
CSTF3-208ENST00000528865 SLC25A29Q8N8R3 303 aa6.19□□□□□ -1.42
CSTF3-208ENST00000528865 KLHL30-AS1Q8NEE0 82 aa6.19□□□□□ -1.42
CSTF3-208ENST00000528865 ZNRF2Q8NHG8 242 aa6.19□□□□□ -1.42
CSTF3-208ENST00000528865 AMELXQ99217 191 aa6.19□□□□□ -1.42
CSTF3-208ENST00000528865 SELENOKQ9Y6D0 94 aa6.19□□□□□ -1.42
CSTF3-208ENST00000528865 TRGV11A0A075B6L2 103 aa6.18□□□□□ -1.42
CSTF3-208ENST00000528865 TRAV2A0A0B4J234 112 aa6.18□□□□□ -1.42
CSTF3-208ENST00000528865 IGHV3-30P01768 117 aa6.18□□□□□ -1.42
CSTF3-208ENST00000528865 IGHV3-30-5P0DP03 117 aa6.18□□□□□ -1.42
CSTF3-208ENST00000528865 SCGB1A1P11684 91 aa6.18□□□□□ -1.42
CSTF3-208ENST00000528865 CRYBA4P53673 196 aa6.18□□□□□ -1.42
CSTF3-208ENST00000528865 RPL39P62891 51 aaKnown RBP6.18□□□□□ -1.42
CSTF3-208ENST00000528865 SCGB2A2Q13296 93 aa6.18□□□□□ -1.42
CSTF3-208ENST00000528865 PIK3CD-AS1Q5SR53 167 aa6.18□□□□□ -1.42
CSTF3-208ENST00000528865 C10orf99Q6UWK7 81 aa6.18□□□□□ -1.42
CSTF3-208ENST00000528865 C20orf203Q8NBC4 194 aa6.18□□□□□ -1.42
CSTF3-208ENST00000528865 WFDC12Q8WWY7 111 aa6.18□□□□□ -1.42
CSTF3-208ENST00000528865 UBE2E2Q96LR5 201 aa6.18□□□□□ -1.42
CSTF3-208ENST00000528865 ATRXP46100 2492 aa6.17□□□□□ -1.42
CSTF3-208ENST00000528865 TMEM223A0PJW6 202 aa6.17□□□□□ -1.42
CSTF3-208ENST00000528865 H3BMG7 143 aa6.17□□□□□ -1.42
CSTF3-208ENST00000528865 I3L3M4 83 aa6.17□□□□□ -1.42
CSTF3-208ENST00000528865 J3QR89 54 aa6.17□□□□□ -1.42
CSTF3-208ENST00000528865 LEPROTO15243 131 aa6.17□□□□□ -1.42
CSTF3-208ENST00000528865 TSPAN13O95857 204 aa6.17□□□□□ -1.42
CSTF3-208ENST00000528865 SRSF9Q13242 221 aaKnown RBP eCLIP6.17□□□□□ -1.42
CSTF3-208ENST00000528865 SCGB1D4Q6XE38 83 aa6.17□□□□□ -1.42
CSTF3-208ENST00000528865 Q6YL49 198 aa6.17□□□□□ -1.42
CSTF3-208ENST00000528865 NDUFA11Q86Y39 141 aa6.17□□□□□ -1.42
CSTF3-208ENST00000528865 SBSPONQ8IVN8 264 aa6.17□□□□□ -1.42
CSTF3-208ENST00000528865 ATP6V0E2Q8NHE4 81 aa6.17□□□□□ -1.42
CSTF3-208ENST00000528865 SPAG8Q99932 426 aaPredicted RBP6.17□□□□□ -1.42
CSTF3-208ENST00000528865 ZNF702PQ9H963 129 aa6.17□□□□□ -1.42
CSTF3-208ENST00000528865 PYGO1Q9Y3Y4 419 aa6.17□□□□□ -1.42
CSTF3-208ENST00000528865 ATMQ13315 3056 aa6.17□□□□□ -1.42
CSTF3-208ENST00000528865 TRAV12-2A0A075B6T6 113 aa6.16□□□□□ -1.42
CSTF3-208ENST00000528865 J3QQQ9 107 aa6.16□□□□□ -1.42
CSTF3-208ENST00000528865 SYNJ2BPP57105 145 aa6.16□□□□□ -1.42
CSTF3-208ENST00000528865 TSPEAR-AS2P59090 65 aa6.16□□□□□ -1.42
CSTF3-208ENST00000528865 Q5PR19 223 aa6.16□□□□□ -1.42
CSTF3-208ENST00000528865 CFAP126Q5VTH2 177 aa6.16□□□□□ -1.42
CSTF3-208ENST00000528865 DLX4Q92988 240 aaPredicted RBP6.16□□□□□ -1.42
CSTF3-208ENST00000528865 SPATA25Q9BR10 227 aa6.16□□□□□ -1.42
CSTF3-208ENST00000528865 LINC00467Q9BRT7 94 aa6.16□□□□□ -1.42
CSTF3-208ENST00000528865 PGPEP1Q9NXJ5 209 aa6.16□□□□□ -1.42
CSTF3-208ENST00000528865 VPREB3Q9UKI3 123 aa6.16□□□□□ -1.42
CSTF3-208ENST00000528865 IGF2RP11717 2491 aa6.16□□□□□ -1.42
CSTF3-208ENST00000528865 TMEM238C9JI98 176 aa6.15□□□□□ -1.42
CSTF3-208ENST00000528865 CFC1BP0CG36 223 aa6.15□□□□□ -1.42
CSTF3-208ENST00000528865 CFC1P0CG37 223 aa6.15□□□□□ -1.42
CSTF3-208ENST00000528865 HOXD3P31249 432 aaPredicted RBP6.15□□□□□ -1.42
CSTF3-208ENST00000528865 SMCPP49901 116 aaPredicted RBP6.15□□□□□ -1.42
CSTF3-208ENST00000528865 ZNF56Q15929 161 aa6.15□□□□□ -1.42
CSTF3-208ENST00000528865 SPINK13Q1W4C9 94 aa6.15□□□□□ -1.42
CSTF3-208ENST00000528865 TMEM170BQ5T4T1 132 aa6.15□□□□□ -1.42
CSTF3-208ENST00000528865 LYRM7Q5U5X0 104 aa6.15□□□□□ -1.42
CSTF3-208ENST00000528865 SH2D6Q7Z4S9 175 aa6.15□□□□□ -1.42
CSTF3-208ENST00000528865 Q8N2B8 174 aa6.15□□□□□ -1.42
CSTF3-208ENST00000528865 FAM104AQ969W3 186 aa6.15□□□□□ -1.42
CSTF3-208ENST00000528865 SIGMAR1Q99720 223 aa6.15□□□□□ -1.42
CSTF3-208ENST00000528865 MRPL16Q9NX20 251 aaKnown RBP6.15□□□□□ -1.42
CSTF3-208ENST00000528865 DMXL2Q8TDJ6 3036 aa6.15□□□□□ -1.43
CSTF3-208ENST00000528865 HRNRQ86YZ3 2850 aaPredicted RBP6.14□□□□□ -1.43
CSTF3-208ENST00000528865 AKAP6Q13023 2319 aa6.14□□□□□ -1.43
CSTF3-208ENST00000528865 IGLV4-3A0A075B6K6 122 aa6.14□□□□□ -1.43
CSTF3-208ENST00000528865 TRBV20-1A0A075B6N2 111 aa6.14□□□□□ -1.43
CSTF3-208ENST00000528865 GAGE12HA6NDE8 117 aa6.14□□□□□ -1.43
CSTF3-208ENST00000528865 M0QXV9 152 aa6.14□□□□□ -1.43
CSTF3-208ENST00000528865 RHODO00212 210 aa6.14□□□□□ -1.43
CSTF3-208ENST00000528865 IGKV3-20P01619 116 aa6.14□□□□□ -1.43
CSTF3-208ENST00000528865 RBMY1A1P0DJD3 496 aaKnown RBP6.14□□□□□ -1.43
CSTF3-208ENST00000528865 RBMY1CP0DJD4 496 aa6.14□□□□□ -1.43
CSTF3-208ENST00000528865 ZNF22P17026 224 aaPredicted RBP6.14□□□□□ -1.43
CSTF3-208ENST00000528865 LGALS3P17931 250 aaKnown RBP6.14□□□□□ -1.43
CSTF3-208ENST00000528865 EMP1P54849 157 aa6.14□□□□□ -1.43
CSTF3-208ENST00000528865 RBMY1FQ15415 496 aaKnown RBP6.14□□□□□ -1.43
CSTF3-208ENST00000528865 ETDBQ3ZM63 59 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms