RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 GAGE13Q4V321 117 aa9.38□□□□□ -0.91
CHRDL2-205ENST00000528471 COX8CQ7Z4L0 72 aa9.38□□□□□ -0.91
CHRDL2-205ENST00000528471 PHLDA3Q9Y5J5 127 aa9.38□□□□□ -0.91
CHRDL2-205ENST00000528471 IGHV3-30P01768 117 aa9.37□□□□□ -0.91
CHRDL2-205ENST00000528471 IGHV3-33P01772 117 aa9.37□□□□□ -0.91
CHRDL2-205ENST00000528471 IGHV3-30-3P0DP02 117 aa9.37□□□□□ -0.91
CHRDL2-205ENST00000528471 IGHV3-30-5P0DP03 117 aa9.37□□□□□ -0.91
CHRDL2-205ENST00000528471 TPT1P13693 172 aaKnown RBP9.37□□□□□ -0.91
CHRDL2-205ENST00000528471 DNLZQ5SXM8 178 aa9.37□□□□□ -0.91
CHRDL2-205ENST00000528471 FAM74A4Q5TZK3 123 aa9.37□□□□□ -0.91
CHRDL2-205ENST00000528471 DMRTA1Q5VZB9 504 aa9.37□□□□□ -0.91
CHRDL2-205ENST00000528471 Q6ZSN1 163 aa9.37□□□□□ -0.91
CHRDL2-205ENST00000528471 KRTAP4-5Q9BYR2 181 aa9.37□□□□□ -0.91
CHRDL2-205ENST00000528471 JPT2Q9H910 190 aa9.37□□□□□ -0.91
CHRDL2-205ENST00000528471 Q9HAA7 133 aa9.37□□□□□ -0.91
CHRDL2-205ENST00000528471 M0R381 172 aa9.36□□□□□ -0.91
CHRDL2-205ENST00000528471 ZNF674Q2M3X9 581 aa9.36□□□□□ -0.91
CHRDL2-205ENST00000528471 LINC01559Q495D7 138 aa9.36□□□□□ -0.91
CHRDL2-205ENST00000528471 TMUB2Q71RG4 321 aa9.36□□□□□ -0.91
CHRDL2-205ENST00000528471 MBD3L1Q8WWY6 194 aa9.36□□□□□ -0.91
CHRDL2-205ENST00000528471 SAMD10Q9BYL1 202 aa9.36□□□□□ -0.91
CHRDL2-205ENST00000528471 SCO2A0A1W2PP80 73 aa9.35□□□□□ -0.91
CHRDL2-205ENST00000528471 IBA57-AS1B1ANH7 110 aa9.35□□□□□ -0.91
CHRDL2-205ENST00000528471 S100A9P06702 114 aaKnown RBP9.35□□□□□ -0.91
CHRDL2-205ENST00000528471 H2AFB1P0C5Y9 115 aa9.35□□□□□ -0.91
CHRDL2-205ENST00000528471 LINC00518Q8N0U6 118 aa9.35□□□□□ -0.91
CHRDL2-205ENST00000528471 ZFP82Q8N141 532 aa9.35□□□□□ -0.91
CHRDL2-205ENST00000528471 C14orf178Q8N769 122 aaPredicted RBP9.35□□□□□ -0.91
CHRDL2-205ENST00000528471 SCRT2Q9NQ03 307 aa9.35□□□□□ -0.91
CHRDL2-205ENST00000528471 A0A087WWL8 130 aa9.34□□□□□ -0.91
CHRDL2-205ENST00000528471 LINC00694P0DN24 101 aa9.34□□□□□ -0.91
CHRDL2-205ENST00000528471 UFSP1Q6NVU6 142 aa9.34□□□□□ -0.91
CHRDL2-205ENST00000528471 Q8N1X5 172 aa9.34□□□□□ -0.91
CHRDL2-205ENST00000528471 C9orf62Q8N4C0 152 aa9.34□□□□□ -0.91
CHRDL2-205ENST00000528471 A0A087WWC5 75 aa9.33□□□□□ -0.92
CHRDL2-205ENST00000528471 LINC00862A6NCI5 91 aa9.33□□□□□ -0.92
CHRDL2-205ENST00000528471 LAGE3Q14657 143 aa9.33□□□□□ -0.92
CHRDL2-205ENST00000528471 SFRP2Q96HF1 295 aa9.33□□□□□ -0.92
CHRDL2-205ENST00000528471 BAGE2Q86Y30 109 aa9.32□□□□□ -0.92
CHRDL2-205ENST00000528471 SNAPINO95295 136 aa9.31□□□□□ -0.92
CHRDL2-205ENST00000528471 RPL19P84098 196 aaKnown RBP9.31□□□□□ -0.92
CHRDL2-205ENST00000528471 PRR27Q6MZM9 219 aa9.31□□□□□ -0.92
CHRDL2-205ENST00000528471 TM2D2Q9BX73 214 aa9.31□□□□□ -0.92
CHRDL2-205ENST00000528471 MANBALQ9NQG1 85 aa9.31□□□□□ -0.92
CHRDL2-205ENST00000528471 GNG13Q9P2W3 67 aa9.31□□□□□ -0.92
CHRDL2-205ENST00000528471 Q9UF83 564 aa9.31□□□□□ -0.92
CHRDL2-205ENST00000528471 URGCP-MRPS24S4R325 110 aa9.31□□□□□ -0.92
CHRDL2-205ENST00000528471 IGLV5-52A0A0A0MRZ9 124 aa9.31□□□□□ -0.92
CHRDL2-205ENST00000528471 TEX46H3BTG2 121 aa9.31□□□□□ -0.92
CHRDL2-205ENST00000528471 GATCO43716 136 aaKnown RBP9.31□□□□□ -0.92
CHRDL2-205ENST00000528471 GCSHP23434 173 aa9.31□□□□□ -0.92
CHRDL2-205ENST00000528471 NKX2-5P52952 324 aaPredicted RBP9.31□□□□□ -0.92
CHRDL2-205ENST00000528471 EIF5AL1Q6IS14 154 aaKnown RBP9.31□□□□□ -0.92
CHRDL2-205ENST00000528471 Q8N3U1 123 aa9.31□□□□□ -0.92
CHRDL2-205ENST00000528471 TRBV10-1A0A0K0K1A3 114 aa9.3□□□□□ -0.92
CHRDL2-205ENST00000528471 LRCOL1A6NCL2 159 aa9.3□□□□□ -0.92
CHRDL2-205ENST00000528471 CXCL1P09341 107 aa9.3□□□□□ -0.92
CHRDL2-205ENST00000528471 KRTAP10-1P60331 282 aa9.3□□□□□ -0.92
CHRDL2-205ENST00000528471 RPL36AP83881 106 aaKnown RBP9.3□□□□□ -0.92
CHRDL2-205ENST00000528471 TOR2AQ5JU69 321 aa9.3□□□□□ -0.92
CHRDL2-205ENST00000528471 OR10AG1Q8NH19 301 aa9.3□□□□□ -0.92
CHRDL2-205ENST00000528471 NTN5Q8WTR8 489 aaPredicted RBP9.3□□□□□ -0.92
CHRDL2-205ENST00000528471 RPL36ALQ969Q0 106 aaKnown RBP9.3□□□□□ -0.92
CHRDL2-205ENST00000528471 MLST8Q9BVC4 326 aa9.3□□□□□ -0.92
CHRDL2-205ENST00000528471 TRAV8-3A0A0A6YYJ7 113 aa9.29□□□□□ -0.92
CHRDL2-205ENST00000528471 RPL35P42766 123 aaKnown RBP9.29□□□□□ -0.92
CHRDL2-205ENST00000528471 RAB5CP51148 216 aa9.29□□□□□ -0.92
CHRDL2-205ENST00000528471 ZNF56Q15929 161 aa9.29□□□□□ -0.92
CHRDL2-205ENST00000528471 SPANXN1Q5VSR9 72 aa9.29□□□□□ -0.92
CHRDL2-205ENST00000528471 DAZ4Q86SG3 579 aaKnown RBP9.29□□□□□ -0.92
CHRDL2-205ENST00000528471 DAZ3Q9NR90 486 aaKnown RBP9.29□□□□□ -0.92
CHRDL2-205ENST00000528471 KCNIP4Q6PIL6 250 aa9.28□□□□□ -0.92
CHRDL2-205ENST00000528471 Q8N814 137 aa9.28□□□□□ -0.92
CHRDL2-205ENST00000528471 TRBV7-3A0A075B6L6 115 aa9.27□□□□□ -0.93
CHRDL2-205ENST00000528471 TRAV1-1A0A0B4J248 108 aa9.27□□□□□ -0.93
CHRDL2-205ENST00000528471 MUC21A0A0G2JKD1 596 aa9.27□□□□□ -0.93
CHRDL2-205ENST00000528471 MUC21A0A140T8X8 626 aa9.27□□□□□ -0.93
CHRDL2-205ENST00000528471 EPM2AB3EWF7 344 aa9.27□□□□□ -0.93
CHRDL2-205ENST00000528471 RAB4BP61018 213 aa9.27□□□□□ -0.93
CHRDL2-205ENST00000528471 CCL20P78556 96 aa9.27□□□□□ -0.93
CHRDL2-205ENST00000528471 CENPWQ5EE01 88 aa9.27□□□□□ -0.93
CHRDL2-205ENST00000528471 C11orf52Q96A22 123 aa9.27□□□□□ -0.93
CHRDL2-205ENST00000528471 DERL1Q9BUN8 251 aa9.27□□□□□ -0.93
CHRDL2-205ENST00000528471 A0A087WX48 190 aa9.26□□□□□ -0.93
CHRDL2-205ENST00000528471 SNAI2O43623 268 aa9.26□□□□□ -0.93
CHRDL2-205ENST00000528471 IFNA1P01562 189 aa9.26□□□□□ -0.93
CHRDL2-205ENST00000528471 OR5AL1P0C617 328 aa9.26□□□□□ -0.93
CHRDL2-205ENST00000528471 XGP55808 180 aa9.26□□□□□ -0.93
CHRDL2-205ENST00000528471 UBE2D3P61077 147 aa9.26□□□□□ -0.93
CHRDL2-205ENST00000528471 UBE2D2P62837 147 aa9.26□□□□□ -0.93
CHRDL2-205ENST00000528471 NIT1Q86X76 327 aa9.26□□□□□ -0.93
CHRDL2-205ENST00000528471 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.26□□□□□ -0.93
CHRDL2-205ENST00000528471 RMI2Q96E14 147 aa9.26□□□□□ -0.93
CHRDL2-205ENST00000528471 F5H697 171 aa9.25□□□□□ -0.93
CHRDL2-205ENST00000528471 SMIM17P0DL12 118 aa9.25□□□□□ -0.93
CHRDL2-205ENST00000528471 SULT1A2P50226 295 aa9.25□□□□□ -0.93
CHRDL2-205ENST00000528471 MEF2BQ02080 365 aaPredicted RBP9.25□□□□□ -0.93
CHRDL2-205ENST00000528471 DAZAP1Q96EP5 407 aaKnown RBP9.25□□□□□ -0.93
CHRDL2-205ENST00000528471 AP1S3Q96PC3 154 aa9.25□□□□□ -0.93
CHRDL2-205ENST00000528471 TPPP3Q9BW30 176 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms