RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 SNAI2O43623 268 aa8.21□□□□□ -1.1
TRAPPC4-209ENST00000528230 LINC00694P0DN24 101 aa8.21□□□□□ -1.1
TRAPPC4-209ENST00000528230 RPL19P84098 196 aaKnown RBP8.21□□□□□ -1.1
TRAPPC4-209ENST00000528230 CENPWQ5EE01 88 aa8.21□□□□□ -1.1
TRAPPC4-209ENST00000528230 LINC01556Q5JQF7 62 aa8.21□□□□□ -1.1
TRAPPC4-209ENST00000528230 PRR27Q6MZM9 219 aa8.21□□□□□ -1.1
TRAPPC4-209ENST00000528230 MSRB1Q9NZV6 116 aa8.21□□□□□ -1.1
TRAPPC4-209ENST00000528230 HECTD4Q9Y4D8 3996 aa8.2□□□□□ -1.1
TRAPPC4-209ENST00000528230 IGLV2-8P01709 118 aa8.2□□□□□ -1.1
TRAPPC4-209ENST00000528230 GNG4P50150 75 aa8.2□□□□□ -1.1
TRAPPC4-209ENST00000528230 BLOC1S1P78537 153 aa8.2□□□□□ -1.1
TRAPPC4-209ENST00000528230 OR10J3Q5JRS4 329 aa8.2□□□□□ -1.1
TRAPPC4-209ENST00000528230 FAM74A4Q5TZK3 123 aa8.2□□□□□ -1.1
TRAPPC4-209ENST00000528230 C14orf178Q8N769 122 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC4-209ENST00000528230 DAZAP1Q96EP5 407 aaKnown RBP8.2□□□□□ -1.1
TRAPPC4-209ENST00000528230 BIN3Q9NQY0 253 aa8.2□□□□□ -1.1
TRAPPC4-209ENST00000528230 MED9Q9NWA0 146 aa8.2□□□□□ -1.1
TRAPPC4-209ENST00000528230 A0A087WWC5 75 aa8.19□□□□□ -1.1
TRAPPC4-209ENST00000528230 A0A087WWL8 130 aa8.19□□□□□ -1.1
TRAPPC4-209ENST00000528230 TRBV10-1A0A0K0K1A3 114 aa8.19□□□□□ -1.1
TRAPPC4-209ENST00000528230 RAB19A4D1S5 217 aa8.19□□□□□ -1.1
TRAPPC4-209ENST00000528230 GAGE12JA6NER3 117 aa8.19□□□□□ -1.1
TRAPPC4-209ENST00000528230 C16orf90A8MZG2 172 aa8.19□□□□□ -1.1
TRAPPC4-209ENST00000528230 RPS20P60866 119 aaKnown RBP8.19□□□□□ -1.1
TRAPPC4-209ENST00000528230 GAGE1Q13065 139 aa8.19□□□□□ -1.1
TRAPPC4-209ENST00000528230 GAGE4Q13068 117 aa8.19□□□□□ -1.1
TRAPPC4-209ENST00000528230 GAGE5Q13069 117 aa8.19□□□□□ -1.1
TRAPPC4-209ENST00000528230 GAGE13Q4V321 117 aa8.19□□□□□ -1.1
TRAPPC4-209ENST00000528230 LCE2AQ5TA79 106 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC4-209ENST00000528230 OR10AG1Q8NH19 301 aa8.19□□□□□ -1.1
TRAPPC4-209ENST00000528230 TNFRSF18Q9Y5U5 241 aa8.19□□□□□ -1.1
TRAPPC4-209ENST00000528230 PKD1P98161 4303 aa8.19□□□□□ -1.1
TRAPPC4-209ENST00000528230 C19orf71A6NCJ1 209 aa8.18□□□□□ -1.1
TRAPPC4-209ENST00000528230 IBA57-AS1B1ANH7 110 aa8.18□□□□□ -1.1
TRAPPC4-209ENST00000528230 EREGO14944 169 aa8.18□□□□□ -1.1
TRAPPC4-209ENST00000528230 RAB4BP61018 213 aa8.18□□□□□ -1.1
TRAPPC4-209ENST00000528230 SPANXN1Q5VSR9 72 aa8.18□□□□□ -1.1
TRAPPC4-209ENST00000528230 SPATA12Q7Z6I5 190 aa8.18□□□□□ -1.1
TRAPPC4-209ENST00000528230 LYPD6BQ8NI32 183 aa8.18□□□□□ -1.1
TRAPPC4-209ENST00000528230 Q9UF83 564 aa8.18□□□□□ -1.1
TRAPPC4-209ENST00000528230 TRBV20OR9-2A0A075B6H5 130 aa8.17□□□□□ -1.1
TRAPPC4-209ENST00000528230 ERVFC1-1P60608 527 aa8.17□□□□□ -1.1
TRAPPC4-209ENST00000528230 ALKAL2Q6UX46 152 aa8.17□□□□□ -1.1
TRAPPC4-209ENST00000528230 XKRY2A2RUG3 117 aa8.16□□□□□ -1.1
TRAPPC4-209ENST00000528230 RBFOX3A6NFN3 312 aa8.16□□□□□ -1.1
TRAPPC4-209ENST00000528230 P01737 135 aa8.16□□□□□ -1.1
TRAPPC4-209ENST00000528230 IGLC6P0CF74 106 aa8.16□□□□□ -1.1
TRAPPC4-209ENST00000528230 RPL36AP83881 106 aaKnown RBP8.16□□□□□ -1.1
TRAPPC4-209ENST00000528230 OR2D3Q8NGH3 330 aa8.16□□□□□ -1.1
TRAPPC4-209ENST00000528230 OR10G8Q8NGN5 311 aa8.16□□□□□ -1.1
TRAPPC4-209ENST00000528230 RPL36ALQ969Q0 106 aaKnown RBP8.16□□□□□ -1.1
TRAPPC4-209ENST00000528230 PGPEP1Q9NXJ5 209 aa8.16□□□□□ -1.1
TRAPPC4-209ENST00000528230 TRBV7-3A0A075B6L6 115 aa8.15□□□□□ -1.1
TRAPPC4-209ENST00000528230 A0A1B0GVG6 124 aa8.15□□□□□ -1.1
TRAPPC4-209ENST00000528230 F2Z2F3 143 aa8.15□□□□□ -1.1
TRAPPC4-209ENST00000528230 TMEM250H0YL14 139 aa8.15□□□□□ -1.1
TRAPPC4-209ENST00000528230 NDUFS6O75380 124 aaKnown RBP8.15□□□□□ -1.1
TRAPPC4-209ENST00000528230 UBE2D3P61077 147 aa8.15□□□□□ -1.1
TRAPPC4-209ENST00000528230 UBE2D2P62837 147 aa8.15□□□□□ -1.1
TRAPPC4-209ENST00000528230 CACNG7P62955 275 aa8.15□□□□□ -1.1
TRAPPC4-209ENST00000528230 LAGE3Q14657 143 aa8.15□□□□□ -1.1
TRAPPC4-209ENST00000528230 FER1L6-AS1Q8NA97 138 aa8.15□□□□□ -1.1
TRAPPC4-209ENST00000528230 A0A087WTM6 91 aa8.14□□□□□ -1.11
TRAPPC4-209ENST00000528230 CDK2AP2O75956 126 aa8.14□□□□□ -1.11
TRAPPC4-209ENST00000528230 IGHV3-30P01768 117 aa8.14□□□□□ -1.11
TRAPPC4-209ENST00000528230 IGHV3-33P01772 117 aa8.14□□□□□ -1.11
TRAPPC4-209ENST00000528230 SMIM17P0DL12 118 aa8.14□□□□□ -1.11
TRAPPC4-209ENST00000528230 IGHV3-30-3P0DP02 117 aa8.14□□□□□ -1.11
TRAPPC4-209ENST00000528230 IGHV3-30-5P0DP03 117 aa8.14□□□□□ -1.11
TRAPPC4-209ENST00000528230 KRTAP10-2P60368 255 aa8.14□□□□□ -1.11
TRAPPC4-209ENST00000528230 ZNF56Q15929 161 aa8.14□□□□□ -1.11
TRAPPC4-209ENST00000528230 AP1S3Q96PC3 154 aa8.14□□□□□ -1.11
TRAPPC4-209ENST00000528230 KIF25-AS1Q9Y6Z4 181 aa8.14□□□□□ -1.11
TRAPPC4-209ENST00000528230 MUC21A0A0G2JKD1 596 aa8.13□□□□□ -1.11
TRAPPC4-209ENST00000528230 MUC21A0A140T8X8 626 aa8.13□□□□□ -1.11
TRAPPC4-209ENST00000528230 GZMBP10144 247 aa8.13□□□□□ -1.11
TRAPPC4-209ENST00000528230 NKX2-5P52952 324 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC4-209ENST00000528230 TOR2AQ5JU69 321 aa8.13□□□□□ -1.11
TRAPPC4-209ENST00000528230 CDPF1Q6NVV7 123 aa8.13□□□□□ -1.11
TRAPPC4-209ENST00000528230 WDR73Q6P4I2 378 aa8.13□□□□□ -1.11
TRAPPC4-209ENST00000528230 NUDT10Q8NFP7 164 aa8.13□□□□□ -1.11
TRAPPC4-209ENST00000528230 OCC1Q8TAD7 63 aa8.13□□□□□ -1.11
TRAPPC4-209ENST00000528230 NUDT11Q96G61 164 aa8.13□□□□□ -1.11
TRAPPC4-209ENST00000528230 PKHD1P08F94 4074 aa8.13□□□□□ -1.11
TRAPPC4-209ENST00000528230 DNAH11Q96DT5 4516 aa8.12□□□□□ -1.11
TRAPPC4-209ENST00000528230 F5H697 171 aa8.12□□□□□ -1.11
TRAPPC4-209ENST00000528230 SSTP61278 116 aa8.12□□□□□ -1.11
TRAPPC4-209ENST00000528230 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC4-209ENST00000528230 NEXN-AS1Q8NBZ9 246 aa8.12□□□□□ -1.11
TRAPPC4-209ENST00000528230 CHCHD7Q9BUK0 85 aa8.12□□□□□ -1.11
TRAPPC4-209ENST00000528230 TRAV8-3A0A0A6YYJ7 113 aa8.11□□□□□ -1.11
TRAPPC4-209ENST00000528230 PSCAO43653 123 aa8.11□□□□□ -1.11
TRAPPC4-209ENST00000528230 NIT1Q86X76 327 aa8.11□□□□□ -1.11
TRAPPC4-209ENST00000528230 TPPP3Q9BW30 176 aa8.11□□□□□ -1.11
TRAPPC4-209ENST00000528230 TM2D2Q9BX73 214 aa8.11□□□□□ -1.11
TRAPPC4-209ENST00000528230 RPP21Q9H633 154 aaKnown RBP8.11□□□□□ -1.11
TRAPPC4-209ENST00000528230 URGCP-MRPS24S4R325 110 aa8.11□□□□□ -1.11
TRAPPC4-209ENST00000528230 DYNC1H1Q14204 4646 aaKnown RBP8.1□□□□□ -1.11
TRAPPC4-209ENST00000528230 H7C1H1 209 aa8.1□□□□□ -1.11
TRAPPC4-209ENST00000528230 K7EN84 100 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms