RNA–Protein interactions for RNA: ENST00000527836.5

SCN3B-204, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-204ENST00000527836 TOR2AQ5JU69 321 aa8.32□□□□□ -1.08
SCN3B-204ENST00000527836 ZFP82Q8N141 532 aa8.32□□□□□ -1.08
SCN3B-204ENST00000527836 KCNRGQ8N5I3 272 aa8.32□□□□□ -1.08
SCN3B-204ENST00000527836 C14orf178Q8N769 122 aaPredicted RBP8.32□□□□□ -1.08
SCN3B-204ENST00000527836 NTN5Q8WTR8 489 aaPredicted RBP8.32□□□□□ -1.08
SCN3B-204ENST00000527836 FRZBQ92765 325 aa8.32□□□□□ -1.08
SCN3B-204ENST00000527836 SAMD10Q9BYL1 202 aa8.32□□□□□ -1.08
SCN3B-204ENST00000527836 DNAH5Q8TE73 4624 aa8.31□□□□□ -1.08
SCN3B-204ENST00000527836 TRAV8-3A0A0A6YYJ7 113 aa8.31□□□□□ -1.08
SCN3B-204ENST00000527836 A0A0D9SG52 128 aa8.31□□□□□ -1.08
SCN3B-204ENST00000527836 LTAP01374 205 aa8.31□□□□□ -1.08
SCN3B-204ENST00000527836 ZNF674Q2M3X9 581 aa8.31□□□□□ -1.08
SCN3B-204ENST00000527836 DNLZQ5SXM8 178 aa8.31□□□□□ -1.08
SCN3B-204ENST00000527836 KCNIP4Q6PIL6 250 aa8.31□□□□□ -1.08
SCN3B-204ENST00000527836 TRBV6-1A0A0K0K1D8 114 aa8.3□□□□□ -1.08
SCN3B-204ENST00000527836 LINC01559Q495D7 138 aa8.3□□□□□ -1.08
SCN3B-204ENST00000527836 COX8CQ7Z4L0 72 aa8.3□□□□□ -1.08
SCN3B-204ENST00000527836 Q8N814 137 aa8.3□□□□□ -1.08
SCN3B-204ENST00000527836 SFRP2Q96HF1 295 aa8.3□□□□□ -1.08
SCN3B-204ENST00000527836 LRCOL1A6NCL2 159 aa8.29□□□□□ -1.08
SCN3B-204ENST00000527836 HMSDA8MTL9 139 aa8.29□□□□□ -1.08
SCN3B-204ENST00000527836 BCL2L11O43521 198 aa8.29□□□□□ -1.08
SCN3B-204ENST00000527836 H2AFB1P0C5Y9 115 aa8.29□□□□□ -1.08
SCN3B-204ENST00000527836 XGP55808 180 aa8.29□□□□□ -1.08
SCN3B-204ENST00000527836 RPL36AP83881 106 aaKnown RBP8.29□□□□□ -1.08
SCN3B-204ENST00000527836 DAZ4Q86SG3 579 aaKnown RBP8.29□□□□□ -1.08
SCN3B-204ENST00000527836 BAGE2Q86Y30 109 aa8.29□□□□□ -1.08
SCN3B-204ENST00000527836 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.29□□□□□ -1.08
SCN3B-204ENST00000527836 MBD3L1Q8WWY6 194 aa8.29□□□□□ -1.08
SCN3B-204ENST00000527836 RPL36ALQ969Q0 106 aaKnown RBP8.29□□□□□ -1.08
SCN3B-204ENST00000527836 RMI2Q96E14 147 aa8.29□□□□□ -1.08
SCN3B-204ENST00000527836 DAZ3Q9NR90 486 aaKnown RBP8.29□□□□□ -1.08
SCN3B-204ENST00000527836 APOBP04114 4563 aaKnown RBP8.28□□□□□ -1.08
SCN3B-204ENST00000527836 A0A087WX48 190 aa8.28□□□□□ -1.08
SCN3B-204ENST00000527836 SCO2A0A1W2PP80 73 aa8.28□□□□□ -1.08
SCN3B-204ENST00000527836 LINC00694P0DN24 101 aa8.28□□□□□ -1.08
SCN3B-204ENST00000527836 ZNF56Q15929 161 aa8.28□□□□□ -1.08
SCN3B-204ENST00000527836 PRR27Q6MZM9 219 aa8.28□□□□□ -1.08
SCN3B-204ENST00000527836 UFSP1Q6NVU6 142 aa8.28□□□□□ -1.08
SCN3B-204ENST00000527836 Q8N3U1 123 aa8.28□□□□□ -1.08
SCN3B-204ENST00000527836 Q9UF83 564 aa8.28□□□□□ -1.08
SCN3B-204ENST00000527836 COX11Q9Y6N1 276 aa8.28□□□□□ -1.08
SCN3B-204ENST00000527836 TRBV10-1A0A0K0K1A3 114 aa8.27□□□□□ -1.09
SCN3B-204ENST00000527836 FAM229AH3BQW9 127 aa8.27□□□□□ -1.09
SCN3B-204ENST00000527836 TEX46H3BTG2 121 aa8.27□□□□□ -1.09
SCN3B-204ENST00000527836 SMR3BP02814 79 aaPredicted RBP8.27□□□□□ -1.09
SCN3B-204ENST00000527836 Q5VSD8 79 aa8.27□□□□□ -1.09
SCN3B-204ENST00000527836 SPANXN1Q5VSR9 72 aa8.27□□□□□ -1.09
SCN3B-204ENST00000527836 TRBV7-3A0A075B6L6 115 aa8.26□□□□□ -1.09
SCN3B-204ENST00000527836 IGKV2D-24A0A075B6R9 120 aa8.26□□□□□ -1.09
SCN3B-204ENST00000527836 TMEM262E9PQX1 116 aa8.26□□□□□ -1.09
SCN3B-204ENST00000527836 F5H697 171 aa8.26□□□□□ -1.09
SCN3B-204ENST00000527836 LECT2O14960 151 aa8.26□□□□□ -1.09
SCN3B-204ENST00000527836 INAFM2P0DMQ5 153 aa8.26□□□□□ -1.09
SCN3B-204ENST00000527836 SSTP61278 116 aa8.26□□□□□ -1.09
SCN3B-204ENST00000527836 RPL19P84098 196 aaKnown RBP8.26□□□□□ -1.09
SCN3B-204ENST00000527836 ELOBQ15370 118 aa8.26□□□□□ -1.09
SCN3B-204ENST00000527836 TMUB2Q71RG4 321 aa8.26□□□□□ -1.09
SCN3B-204ENST00000527836 TMEM70Q9BUB7 260 aa8.26□□□□□ -1.09
SCN3B-204ENST00000527836 GNG13Q9P2W3 67 aa8.26□□□□□ -1.09
SCN3B-204ENST00000527836 KLK12Q9UKR0 248 aa8.26□□□□□ -1.09
SCN3B-204ENST00000527836 SMIM17P0DL12 118 aa8.25□□□□□ -1.09
SCN3B-204ENST00000527836 RAB4BP61018 213 aa8.25□□□□□ -1.09
SCN3B-204ENST00000527836 HAMPP81172 84 aa8.25□□□□□ -1.09
SCN3B-204ENST00000527836 EIF5AL1Q6IS14 154 aaKnown RBP8.25□□□□□ -1.09
SCN3B-204ENST00000527836 NIT1Q86X76 327 aa8.25□□□□□ -1.09
SCN3B-204ENST00000527836 OR10AG1Q8NH19 301 aa8.25□□□□□ -1.09
SCN3B-204ENST00000527836 MANBALQ9NQG1 85 aa8.25□□□□□ -1.09
SCN3B-204ENST00000527836 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.24□□□□□ -1.09
SCN3B-204ENST00000527836 MUC21A0A0G2JKD1 596 aa8.24□□□□□ -1.09
SCN3B-204ENST00000527836 MUC21A0A140T8X8 626 aa8.24□□□□□ -1.09
SCN3B-204ENST00000527836 RPL35P42766 123 aaKnown RBP8.24□□□□□ -1.09
SCN3B-204ENST00000527836 UBE2D3P61077 147 aa8.24□□□□□ -1.09
SCN3B-204ENST00000527836 UBE2D2P62837 147 aa8.24□□□□□ -1.09
SCN3B-204ENST00000527836 BAALCQ8WXS3 180 aa8.24□□□□□ -1.09
SCN3B-204ENST00000527836 UBE2WQ96B02 151 aa8.24□□□□□ -1.09
SCN3B-204ENST00000527836 DAZAP1Q96EP5 407 aaKnown RBP8.24□□□□□ -1.09
SCN3B-204ENST00000527836 TPPP3Q9BW30 176 aa8.24□□□□□ -1.09
SCN3B-204ENST00000527836 CXCL1P09341 107 aa8.23□□□□□ -1.09
SCN3B-204ENST00000527836 CHCHD7Q9BUK0 85 aa8.23□□□□□ -1.09
SCN3B-204ENST00000527836 MLST8Q9BVC4 326 aa8.23□□□□□ -1.09
SCN3B-204ENST00000527836 RBFOX3A6NFN3 312 aa8.22□□□□□ -1.09
SCN3B-204ENST00000527836 CRPP02741 224 aa8.22□□□□□ -1.09
SCN3B-204ENST00000527836 RAB5CP51148 216 aa8.22□□□□□ -1.09
SCN3B-204ENST00000527836 Q0VG73 95 aa8.22□□□□□ -1.09
SCN3B-204ENST00000527836 WFDC2Q14508 124 aa8.22□□□□□ -1.09
SCN3B-204ENST00000527836 Q8N976 141 aa8.22□□□□□ -1.09
SCN3B-204ENST00000527836 AP1S3Q96PC3 154 aa8.22□□□□□ -1.09
SCN3B-204ENST00000527836 CHCHD5Q9BSY4 110 aa8.22□□□□□ -1.09
SCN3B-204ENST00000527836 TRBV6-8A0A0A6YYG3 113 aa8.21□□□□□ -1.1
SCN3B-204ENST00000527836 IFNA1P01562 189 aa8.21□□□□□ -1.1
SCN3B-204ENST00000527836 OR5AL1P0C617 328 aa8.21□□□□□ -1.1
SCN3B-204ENST00000527836 GNG4P50150 75 aa8.21□□□□□ -1.1
SCN3B-204ENST00000527836 CENPWQ5EE01 88 aa8.21□□□□□ -1.1
SCN3B-204ENST00000527836 NEXN-AS1Q8NBZ9 246 aa8.21□□□□□ -1.1
SCN3B-204ENST00000527836 OR10G8Q8NGN5 311 aa8.21□□□□□ -1.1
SCN3B-204ENST00000527836 DERL1Q9BUN8 251 aa8.21□□□□□ -1.1
SCN3B-204ENST00000527836 C1orf43Q9BWL3 253 aa8.21□□□□□ -1.1
SCN3B-204ENST00000527836 XKRY2A2RUG3 117 aa8.2□□□□□ -1.1
SCN3B-204ENST00000527836 SNAI2O43623 268 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms