RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 PKHD1L1Q86WI1 4243 aa15.33■□□□□ 0.04
CPSF1-202ENST00000527827 KRBOX1C9JBD0 128 aa15.33■□□□□ 0.04
CPSF1-202ENST00000527827 IGLV2-8P01709 118 aa15.33■□□□□ 0.04
CPSF1-202ENST00000527827 CHCHD7Q9BUK0 85 aa15.33■□□□□ 0.04
CPSF1-202ENST00000527827 TNFSF18Q9UNG2 199 aa15.33■□□□□ 0.04
CPSF1-202ENST00000527827 A0A087WWL8 130 aa15.32■□□□□ 0.04
CPSF1-202ENST00000527827 Q86TA4 180 aa15.32■□□□□ 0.04
CPSF1-202ENST00000527827 OR11H4Q8NGC9 324 aa15.32■□□□□ 0.04
CPSF1-202ENST00000527827 SFRP2Q96HF1 295 aa15.32■□□□□ 0.04
CPSF1-202ENST00000527827 AQP10Q96PS8 301 aa15.32■□□□□ 0.04
CPSF1-202ENST00000527827 A0A087WX48 190 aa15.31■□□□□ 0.04
CPSF1-202ENST00000527827 GRIFINA4D1Z8 144 aa15.31■□□□□ 0.04
CPSF1-202ENST00000527827 M0R036 132 aa15.31■□□□□ 0.04
CPSF1-202ENST00000527827 ELOBQ15370 118 aa15.31■□□□□ 0.04
CPSF1-202ENST00000527827 ZC2HC1AQ96GY0 325 aa15.31■□□□□ 0.04
CPSF1-202ENST00000527827 UBR4Q5T4S7 5183 aa15.3■□□□□ 0.04
CPSF1-202ENST00000527827 PEX7O00628 323 aa15.3■□□□□ 0.04
CPSF1-202ENST00000527827 IFNA7P01567 189 aa15.3■□□□□ 0.04
CPSF1-202ENST00000527827 DEFA1P59665 94 aa15.29■□□□□ 0.04
CPSF1-202ENST00000527827 DEFA3P59666 94 aa15.29■□□□□ 0.04
CPSF1-202ENST00000527827 ZNF726P1Q15940 193 aa15.29■□□□□ 0.04
CPSF1-202ENST00000527827 COX8CQ7Z4L0 72 aa15.29■□□□□ 0.04
CPSF1-202ENST00000527827 SH2D1AO60880 128 aa15.28■□□□□ 0.04
CPSF1-202ENST00000527827 UBE2G2P60604 165 aa15.28■□□□□ 0.04
CPSF1-202ENST00000527827 UBE2D3P61077 147 aa15.28■□□□□ 0.04
CPSF1-202ENST00000527827 UBE2D2P62837 147 aa15.28■□□□□ 0.04
CPSF1-202ENST00000527827 Q0VG73 95 aa15.28■□□□□ 0.04
CPSF1-202ENST00000527827 TRBV10-1A0A0K0K1A3 114 aa15.27■□□□□ 0.04
CPSF1-202ENST00000527827 ENHOQ6UWT2 76 aa15.27■□□□□ 0.04
CPSF1-202ENST00000527827 PLA2G2DQ9UNK4 145 aa15.27■□□□□ 0.04
CPSF1-202ENST00000527827 PHLDA3Q9Y5J5 127 aa15.27■□□□□ 0.04
CPSF1-202ENST00000527827 RPL36AP83881 106 aaKnown RBP15.26■□□□□ 0.03
CPSF1-202ENST00000527827 C14orf177Q52M58 125 aa15.26■□□□□ 0.03
CPSF1-202ENST00000527827 KCNIP4Q6PIL6 250 aa15.26■□□□□ 0.03
CPSF1-202ENST00000527827 RPL36ALQ969Q0 106 aaKnown RBP15.26■□□□□ 0.03
CPSF1-202ENST00000527827 C1orf43Q9BWL3 253 aa15.26■□□□□ 0.03
CPSF1-202ENST00000527827 ALG5Q9Y673 324 aa15.26■□□□□ 0.03
CPSF1-202ENST00000527827 TRBV7-3A0A075B6L6 115 aa15.25■□□□□ 0.03
CPSF1-202ENST00000527827 FAM74A7A6NL05 159 aa15.25■□□□□ 0.03
CPSF1-202ENST00000527827 M0R381 172 aa15.25■□□□□ 0.03
CPSF1-202ENST00000527827 TPT1P13693 172 aaKnown RBP15.25■□□□□ 0.03
CPSF1-202ENST00000527827 HNRNPA3P51991 378 aaKnown RBP15.25■□□□□ 0.03
CPSF1-202ENST00000527827 HIST1H2BAQ96A08 127 aa15.25■□□□□ 0.03
CPSF1-202ENST00000527827 CTXND1A0A1B0GTU2 59 aa15.24■□□□□ 0.03
CPSF1-202ENST00000527827 RPL37AP61513 92 aaKnown RBP15.24■□□□□ 0.03
CPSF1-202ENST00000527827 FAM162BQ5T6X4 162 aa15.24■□□□□ 0.03
CPSF1-202ENST00000527827 ZFP30Q9Y2G7 519 aa15.24■□□□□ 0.03
CPSF1-202ENST00000527827 TMSB15BA0A087X1C1 80 aa15.23■□□□□ 0.03
CPSF1-202ENST00000527827 TMEM262E9PQX1 116 aa15.23■□□□□ 0.03
CPSF1-202ENST00000527827 ZNF674Q2M3X9 581 aa15.23■□□□□ 0.03
CPSF1-202ENST00000527827 LINC01559Q495D7 138 aa15.23■□□□□ 0.03
CPSF1-202ENST00000527827 Q5BKY6 102 aa15.23■□□□□ 0.03
CPSF1-202ENST00000527827 RPL7L1Q6DKI1 246 aaKnown RBP15.23■□□□□ 0.03
CPSF1-202ENST00000527827 ZFP82Q8N141 532 aa15.23■□□□□ 0.03
CPSF1-202ENST00000527827 OR10G8Q8NGN5 311 aa15.23■□□□□ 0.03
CPSF1-202ENST00000527827 TRBV6-8A0A0A6YYG3 113 aa15.22■□□□□ 0.03
CPSF1-202ENST00000527827 MPV17L2Q567V2 206 aa15.22■□□□□ 0.03
CPSF1-202ENST00000527827 C15orf54Q8N8G6 183 aa15.22■□□□□ 0.03
CPSF1-202ENST00000527827 DAZAP1Q96EP5 407 aaKnown RBP15.22■□□□□ 0.03
CPSF1-202ENST00000527827 NKX6-2Q9C056 277 aaPredicted RBP15.22■□□□□ 0.03
CPSF1-202ENST00000527827 USP17L23D6RBM5 183 aa15.21■□□□□ 0.03
CPSF1-202ENST00000527827 FMC1Q96HJ9 113 aa15.21■□□□□ 0.03
CPSF1-202ENST00000527827 CRPP02741 224 aa15.2■□□□□ 0.02
CPSF1-202ENST00000527827 PRSS1P07477 247 aa15.19■□□□□ 0.02
CPSF1-202ENST00000527827 NEXN-AS1Q8NBZ9 246 aa15.19■□□□□ 0.02
CPSF1-202ENST00000527827 TRBV6-1A0A0K0K1D8 114 aa15.18■□□□□ 0.02
CPSF1-202ENST00000527827 A6NHS1 94 aa15.18■□□□□ 0.02
CPSF1-202ENST00000527827 HLA-DQA1P01909 254 aa15.18■□□□□ 0.02
CPSF1-202ENST00000527827 ANGP03950 147 aaKnown RBP15.18■□□□□ 0.02
CPSF1-202ENST00000527827 UBE2G1P62253 170 aa15.18■□□□□ 0.02
CPSF1-202ENST00000527827 BORCS7-ASMTA0A0B4J1R7 106 aa15.17■□□□□ 0.02
CPSF1-202ENST00000527827 LTAP01374 205 aa15.17■□□□□ 0.02
CPSF1-202ENST00000527827 RAB4BP61018 213 aa15.17■□□□□ 0.02
CPSF1-202ENST00000527827 PRR27Q6MZM9 219 aa15.17■□□□□ 0.02
CPSF1-202ENST00000527827 C9orf163Q8N9P6 203 aa15.16■□□□□ 0.02
CPSF1-202ENST00000527827 MED28Q9H204 178 aa15.16■□□□□ 0.02
CPSF1-202ENST00000527827 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.16■□□□□ 0.02
CPSF1-202ENST00000527827 PTTG1O95997 202 aa15.15■□□□□ 0.02
CPSF1-202ENST00000527827 ZNF56Q15929 161 aa15.15■□□□□ 0.02
CPSF1-202ENST00000527827 MIAQ16674 131 aa15.15■□□□□ 0.02
CPSF1-202ENST00000527827 DGAT2L7PQ6IED9 249 aa15.15■□□□□ 0.02
CPSF1-202ENST00000527827 INO80EQ8NBZ0 244 aaPredicted RBP15.15■□□□□ 0.02
CPSF1-202ENST00000527827 CHCHD5Q9BSY4 110 aa15.15■□□□□ 0.02
CPSF1-202ENST00000527827 PANO1I0J062 215 aa15.14■□□□□ 0.01
CPSF1-202ENST00000527827 KRTAP26-1Q6PEX3 210 aa15.14■□□□□ 0.01
CPSF1-202ENST00000527827 NTM-AS1Q6ZSK4 140 aa15.14■□□□□ 0.01
CPSF1-202ENST00000527827 OR10AG1Q8NH19 301 aa15.14■□□□□ 0.01
CPSF1-202ENST00000527827 MAP1LC3B2A6NCE7 125 aa15.13■□□□□ 0.01
CPSF1-202ENST00000527827 AKR1C8PQ5T2L2 129 aa15.13■□□□□ 0.01
CPSF1-202ENST00000527827 MAP1LC3BQ9GZQ8 125 aa15.13■□□□□ 0.01
CPSF1-202ENST00000527827 PRR34Q9NV39 138 aa15.13■□□□□ 0.01
CPSF1-202ENST00000527827 GIPP09681 153 aaPredicted RBP15.12■□□□□ 0.01
CPSF1-202ENST00000527827 MT1HL1P0DM35 61 aa15.12■□□□□ 0.01
CPSF1-202ENST00000527827 FHITP49789 147 aa15.12■□□□□ 0.01
CPSF1-202ENST00000527827 RPL19P84098 196 aaKnown RBP15.12■□□□□ 0.01
CPSF1-202ENST00000527827 PKIAP61925 76 aa15.11■□□□□ 0.01
CPSF1-202ENST00000527827 SDIM1Q6ZPB5 146 aa15.11■□□□□ 0.01
CPSF1-202ENST00000527827 TCEAL7Q9BRU2 100 aa15.11■□□□□ 0.01
CPSF1-202ENST00000527827 FXYD6-FXYD2A0A087WZ82 144 aa15.1■□□□□ 0.01
CPSF1-202ENST00000527827 AKR1C3P42330 323 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms