RNA–Protein interactions for RNA: ENST00000527413.1

SSSCA1-204, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2

Gene SSSCA1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-204ENST00000527413 FAM74A4Q5TZK3 123 aa9.12□□□□□ -0.95
SSSCA1-204ENST00000527413 C14orf178Q8N769 122 aaPredicted RBP9.12□□□□□ -0.95
SSSCA1-204ENST00000527413 PHLDA3Q9Y5J5 127 aa9.12□□□□□ -0.95
SSSCA1-204ENST00000527413 SCO2A0A1W2PP80 73 aa9.11□□□□□ -0.95
SSSCA1-204ENST00000527413 LRCOL1A6NCL2 159 aa9.11□□□□□ -0.95
SSSCA1-204ENST00000527413 PFDN1O60925 122 aa9.11□□□□□ -0.95
SSSCA1-204ENST00000527413 LAGE3Q14657 143 aa9.11□□□□□ -0.95
SSSCA1-204ENST00000527413 ZFP82Q8N141 532 aa9.11□□□□□ -0.95
SSSCA1-204ENST00000527413 Q8N3U1 123 aa9.11□□□□□ -0.95
SSSCA1-204ENST00000527413 SFRP2Q96HF1 295 aa9.11□□□□□ -0.95
SSSCA1-204ENST00000527413 Q9UF83 564 aa9.11□□□□□ -0.95
SSSCA1-204ENST00000527413 A0A087WWL8 130 aa9.1□□□□□ -0.95
SSSCA1-204ENST00000527413 M0R381 172 aa9.1□□□□□ -0.95
SSSCA1-204ENST00000527413 S100A9P06702 114 aaKnown RBP9.1□□□□□ -0.95
SSSCA1-204ENST00000527413 KRTAP10-1P60331 282 aa9.1□□□□□ -0.95
SSSCA1-204ENST00000527413 EIF5AP63241 154 aaKnown RBP9.1□□□□□ -0.95
SSSCA1-204ENST00000527413 A0A087WWC5 75 aa9.09□□□□□ -0.95
SSSCA1-204ENST00000527413 H2AFB1P0C5Y9 115 aa9.09□□□□□ -0.95
SSSCA1-204ENST00000527413 XGP55808 180 aa9.09□□□□□ -0.95
SSSCA1-204ENST00000527413 GCSHP23434 173 aa9.08□□□□□ -0.96
SSSCA1-204ENST00000527413 RPL19P84098 196 aaKnown RBP9.08□□□□□ -0.96
SSSCA1-204ENST00000527413 NTN5Q8WTR8 489 aaPredicted RBP9.08□□□□□ -0.96
SSSCA1-204ENST00000527413 MLST8Q9BVC4 326 aa9.08□□□□□ -0.96
SSSCA1-204ENST00000527413 IGLV5-52A0A0A0MRZ9 124 aa9.07□□□□□ -0.96
SSSCA1-204ENST00000527413 CXCL1P09341 107 aa9.07□□□□□ -0.96
SSSCA1-204ENST00000527413 TMUB2Q71RG4 321 aa9.07□□□□□ -0.96
SSSCA1-204ENST00000527413 DAZ4Q86SG3 579 aaKnown RBP9.07□□□□□ -0.96
SSSCA1-204ENST00000527413 BAGE2Q86Y30 109 aa9.07□□□□□ -0.96
SSSCA1-204ENST00000527413 Q8N814 137 aa9.07□□□□□ -0.96
SSSCA1-204ENST00000527413 DAZ3Q9NR90 486 aaKnown RBP9.07□□□□□ -0.96
SSSCA1-204ENST00000527413 TRBV10-1A0A0K0K1A3 114 aa9.06□□□□□ -0.96
SSSCA1-204ENST00000527413 EPM2AB3EWF7 344 aa9.06□□□□□ -0.96
SSSCA1-204ENST00000527413 PRR27Q6MZM9 219 aa9.06□□□□□ -0.96
SSSCA1-204ENST00000527413 OR10AG1Q8NH19 301 aa9.06□□□□□ -0.96
SSSCA1-204ENST00000527413 TM2D2Q9BX73 214 aa9.06□□□□□ -0.96
SSSCA1-204ENST00000527413 MANBALQ9NQG1 85 aa9.06□□□□□ -0.96
SSSCA1-204ENST00000527413 TRAV8-3A0A0A6YYJ7 113 aa9.05□□□□□ -0.96
SSSCA1-204ENST00000527413 SNAI2O43623 268 aa9.05□□□□□ -0.96
SSSCA1-204ENST00000527413 RPL36AP83881 106 aaKnown RBP9.05□□□□□ -0.96
SSSCA1-204ENST00000527413 TOR2AQ5JU69 321 aa9.05□□□□□ -0.96
SSSCA1-204ENST00000527413 RPL36ALQ969Q0 106 aaKnown RBP9.05□□□□□ -0.96
SSSCA1-204ENST00000527413 RPL35P42766 123 aaKnown RBP9.04□□□□□ -0.96
SSSCA1-204ENST00000527413 ZNF56Q15929 161 aa9.04□□□□□ -0.96
SSSCA1-204ENST00000527413 NIT1Q86X76 327 aa9.04□□□□□ -0.96
SSSCA1-204ENST00000527413 C11orf52Q96A22 123 aa9.04□□□□□ -0.96
SSSCA1-204ENST00000527413 DERL1Q9BUN8 251 aa9.04□□□□□ -0.96
SSSCA1-204ENST00000527413 GNG13Q9P2W3 67 aa9.04□□□□□ -0.96
SSSCA1-204ENST00000527413 URGCP-MRPS24S4R325 110 aa9.04□□□□□ -0.96
SSSCA1-204ENST00000527413 TRBV7-3A0A075B6L6 115 aa9.03□□□□□ -0.96
SSSCA1-204ENST00000527413 TRAV1-1A0A0B4J248 108 aa9.03□□□□□ -0.96
SSSCA1-204ENST00000527413 OR5AL1P0C617 328 aa9.03□□□□□ -0.96
SSSCA1-204ENST00000527413 RAB4BP61018 213 aa9.03□□□□□ -0.96
SSSCA1-204ENST00000527413 UBE2D3P61077 147 aa9.03□□□□□ -0.96
SSSCA1-204ENST00000527413 UBE2D2P62837 147 aa9.03□□□□□ -0.96
SSSCA1-204ENST00000527413 CCL20P78556 96 aa9.03□□□□□ -0.96
SSSCA1-204ENST00000527413 WFDC2Q14508 124 aa9.03□□□□□ -0.96
SSSCA1-204ENST00000527413 OR10G8Q8NGN5 311 aa9.03□□□□□ -0.96
SSSCA1-204ENST00000527413 TMEM70Q9BUB7 260 aa9.03□□□□□ -0.96
SSSCA1-204ENST00000527413 SSBP4Q9BWG4 385 aaPredicted RBP9.03□□□□□ -0.96
SSSCA1-204ENST00000527413 VPS13BQ7Z7G8 4022 aa9.02□□□□□ -0.97
SSSCA1-204ENST00000527413 RAB5CP51148 216 aa9.02□□□□□ -0.97
SSSCA1-204ENST00000527413 Q5VSD8 79 aa9.02□□□□□ -0.97
SSSCA1-204ENST00000527413 SPANXN1Q5VSR9 72 aa9.02□□□□□ -0.97
SSSCA1-204ENST00000527413 EIF5AL1Q6IS14 154 aaKnown RBP9.02□□□□□ -0.97
SSSCA1-204ENST00000527413 FRZBQ92765 325 aa9.02□□□□□ -0.97
SSSCA1-204ENST00000527413 CHCHD7Q9BUK0 85 aa9.02□□□□□ -0.97
SSSCA1-204ENST00000527413 MUC21A0A0G2JKD1 596 aa9.01□□□□□ -0.97
SSSCA1-204ENST00000527413 MUC21A0A140T8X8 626 aa9.01□□□□□ -0.97
SSSCA1-204ENST00000527413 TEX46H3BTG2 121 aa9.01□□□□□ -0.97
SSSCA1-204ENST00000527413 SULT1A2P50226 295 aa9.01□□□□□ -0.97
SSSCA1-204ENST00000527413 HAMPP81172 84 aa9.01□□□□□ -0.97
SSSCA1-204ENST00000527413 CENPWQ5EE01 88 aa9.01□□□□□ -0.97
SSSCA1-204ENST00000527413 NEXN-AS1Q8NBZ9 246 aa9.01□□□□□ -0.97
SSSCA1-204ENST00000527413 RMI2Q96E14 147 aa9.01□□□□□ -0.97
SSSCA1-204ENST00000527413 KLK12Q9UKR0 248 aa9.01□□□□□ -0.97
SSSCA1-204ENST00000527413 COX11Q9Y6N1 276 aa9.01□□□□□ -0.97
SSSCA1-204ENST00000527413 FAT1Q14517 4588 aa9□□□□□ -0.97
SSSCA1-204ENST00000527413 A0A087WX48 190 aa9□□□□□ -0.97
SSSCA1-204ENST00000527413 LECT2O14960 151 aa9□□□□□ -0.97
SSSCA1-204ENST00000527413 TCTE3Q8IZS6 198 aa9□□□□□ -0.97
SSSCA1-204ENST00000527413 DNAJC30Q96LL9 226 aa9□□□□□ -0.97
SSSCA1-204ENST00000527413 AP1S3Q96PC3 154 aa9□□□□□ -0.97
SSSCA1-204ENST00000527413 IGKV2D-24A0A075B6R9 120 aa8.99□□□□□ -0.97
SSSCA1-204ENST00000527413 TRBV6-8A0A0A6YYG3 113 aa8.99□□□□□ -0.97
SSSCA1-204ENST00000527413 IGLV2-8P01709 118 aa8.99□□□□□ -0.97
SSSCA1-204ENST00000527413 SSTP61278 116 aa8.99□□□□□ -0.97
SSSCA1-204ENST00000527413 MEF2BQ02080 365 aaPredicted RBP8.99□□□□□ -0.97
SSSCA1-204ENST00000527413 ELOBQ15370 118 aa8.99□□□□□ -0.97
SSSCA1-204ENST00000527413 KCNIP4Q6PIL6 250 aa8.99□□□□□ -0.97
SSSCA1-204ENST00000527413 BAALCQ8WXS3 180 aa8.99□□□□□ -0.97
SSSCA1-204ENST00000527413 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.98□□□□□ -0.97
SSSCA1-204ENST00000527413 F5H697 171 aa8.98□□□□□ -0.97
SSSCA1-204ENST00000527413 IFNA1P01562 189 aa8.98□□□□□ -0.97
SSSCA1-204ENST00000527413 SMR3BP02814 79 aaPredicted RBP8.98□□□□□ -0.97
SSSCA1-204ENST00000527413 IGLC6P0CF74 106 aa8.98□□□□□ -0.97
SSSCA1-204ENST00000527413 SMIM17P0DL12 118 aa8.98□□□□□ -0.97
SSSCA1-204ENST00000527413 GZMBP10144 247 aa8.98□□□□□ -0.97
SSSCA1-204ENST00000527413 UBE2WQ96B02 151 aa8.98□□□□□ -0.97
SSSCA1-204ENST00000527413 SMIM12Q96EX1 92 aa8.98□□□□□ -0.97
SSSCA1-204ENST00000527413 KIF25-AS1Q9Y6Z4 181 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms