RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 OCC1Q8TAD7 63 aa11.96□□□□□ -0.49
LTBP3-208ENST00000527339 K7EN84 100 aa11.95□□□□□ -0.5
LTBP3-208ENST00000527339 SRP19P09132 144 aaKnown RBP11.95□□□□□ -0.5
LTBP3-208ENST00000527339 Q6ZR54 194 aa11.95□□□□□ -0.5
LTBP3-208ENST00000527339 SH2D6Q7Z4S9 175 aa11.95□□□□□ -0.5
LTBP3-208ENST00000527339 OR10AG1Q8NH19 301 aa11.95□□□□□ -0.5
LTBP3-208ENST00000527339 SAMD10Q9BYL1 202 aa11.95□□□□□ -0.5
LTBP3-208ENST00000527339 LOC100131303A0A0U1RQF7 123 aa11.94□□□□□ -0.5
LTBP3-208ENST00000527339 RTL8CO15255 209 aa11.94□□□□□ -0.5
LTBP3-208ENST00000527339 SPANXN1Q5VSR9 72 aa11.94□□□□□ -0.5
LTBP3-208ENST00000527339 LYPD5Q6UWN5 251 aa11.94□□□□□ -0.5
LTBP3-208ENST00000527339 NUDT10Q8NFP7 164 aa11.94□□□□□ -0.5
LTBP3-208ENST00000527339 NUDT11Q96G61 164 aa11.94□□□□□ -0.5
LTBP3-208ENST00000527339 SMIM7Q9BQ49 75 aa11.94□□□□□ -0.5
LTBP3-208ENST00000527339 Q9H8V8 135 aa11.94□□□□□ -0.5
LTBP3-208ENST00000527339 LY96Q9Y6Y9 160 aa11.94□□□□□ -0.5
LTBP3-208ENST00000527339 CRYGDP07320 174 aa11.93□□□□□ -0.5
LTBP3-208ENST00000527339 IGLC6P0CF74 106 aa11.93□□□□□ -0.5
LTBP3-208ENST00000527339 GZMBP10144 247 aa11.93□□□□□ -0.5
LTBP3-208ENST00000527339 FAM74A4Q5TZK3 123 aa11.93□□□□□ -0.5
LTBP3-208ENST00000527339 FER1L6-AS1Q8NA97 138 aa11.93□□□□□ -0.5
LTBP3-208ENST00000527339 A0A087WWL8 130 aa11.92□□□□□ -0.5
LTBP3-208ENST00000527339 NBDYA0A0U1RRE5 68 aa11.92□□□□□ -0.5
LTBP3-208ENST00000527339 Q6ZSN1 163 aa11.92□□□□□ -0.5
LTBP3-208ENST00000527339 LINC00336Q6ZUF6 198 aa11.92□□□□□ -0.5
LTBP3-208ENST00000527339 RNASE7Q9H1E1 156 aaKnown RBP11.92□□□□□ -0.5
LTBP3-208ENST00000527339 ZNF727A8MUV8 499 aa11.91□□□□□ -0.5
LTBP3-208ENST00000527339 PEA15Q15121 130 aa11.91□□□□□ -0.5
LTBP3-208ENST00000527339 TPPP3Q9BW30 176 aa11.91□□□□□ -0.5
LTBP3-208ENST00000527339 SMDT1Q9H4I9 107 aa11.91□□□□□ -0.5
LTBP3-208ENST00000527339 RPP21Q9H633 154 aaKnown RBP11.91□□□□□ -0.5
LTBP3-208ENST00000527339 MUC21A0A0G2JKD1 596 aa11.9□□□□□ -0.5
LTBP3-208ENST00000527339 MUC21A0A140T8X8 626 aa11.9□□□□□ -0.5
LTBP3-208ENST00000527339 A0A1W2PPQ1 181 aa11.9□□□□□ -0.5
LTBP3-208ENST00000527339 F2Z2F3 143 aa11.9□□□□□ -0.5
LTBP3-208ENST00000527339 TTC32Q5I0X7 151 aa11.9□□□□□ -0.5
LTBP3-208ENST00000527339 FAM231DQ6ZW35 169 aa11.9□□□□□ -0.5
LTBP3-208ENST00000527339 LRP1BQ9NZR2 4599 aa11.9□□□□□ -0.5
LTBP3-208ENST00000527339 SIVA1O15304 175 aa11.89□□□□□ -0.51
LTBP3-208ENST00000527339 TIRAPP58753 221 aa11.89□□□□□ -0.51
LTBP3-208ENST00000527339 CACNG7P62955 275 aa11.89□□□□□ -0.51
LTBP3-208ENST00000527339 FAM74A3Q4VXF1 159 aa11.89□□□□□ -0.51
LTBP3-208ENST00000527339 LINC01551Q86U37 167 aa11.89□□□□□ -0.51
LTBP3-208ENST00000527339 C14orf178Q8N769 122 aaPredicted RBP11.89□□□□□ -0.51
LTBP3-208ENST00000527339 AP1S3Q96PC3 154 aa11.89□□□□□ -0.51
LTBP3-208ENST00000527339 PRSS29PA6NIE9 313 aa11.88□□□□□ -0.51
LTBP3-208ENST00000527339 RAB14P61106 215 aa11.88□□□□□ -0.51
LTBP3-208ENST00000527339 SSTP61278 116 aa11.88□□□□□ -0.51
LTBP3-208ENST00000527339 C9JQL5 133 aa11.87□□□□□ -0.51
LTBP3-208ENST00000527339 GATCO43716 136 aaKnown RBP11.87□□□□□ -0.51
LTBP3-208ENST00000527339 LINC00694P0DN24 101 aa11.87□□□□□ -0.51
LTBP3-208ENST00000527339 CTRLP40313 264 aa11.87□□□□□ -0.51
LTBP3-208ENST00000527339 ERVFC1-1P60608 527 aa11.87□□□□□ -0.51
LTBP3-208ENST00000527339 RAB4BP61018 213 aa11.87□□□□□ -0.51
LTBP3-208ENST00000527339 SRSF3P84103 164 aaKnown RBP11.87□□□□□ -0.51
LTBP3-208ENST00000527339 SOHLH1Q5JUK2 328 aa11.87□□□□□ -0.51
LTBP3-208ENST00000527339 C1orf134Q5TEV5 83 aa11.87□□□□□ -0.51
LTBP3-208ENST00000527339 LYZL1Q6UWQ5 148 aa11.87□□□□□ -0.51
LTBP3-208ENST00000527339 ATP6V0E2Q8NHE4 81 aa11.87□□□□□ -0.51
LTBP3-208ENST00000527339 TRBV10-1A0A0K0K1A3 114 aa11.86□□□□□ -0.51
LTBP3-208ENST00000527339 GAGE12JA6NER3 117 aa11.86□□□□□ -0.51
LTBP3-208ENST00000527339 SMIM17P0DL12 118 aa11.86□□□□□ -0.51
LTBP3-208ENST00000527339 GAGE1Q13065 139 aa11.86□□□□□ -0.51
LTBP3-208ENST00000527339 GAGE4Q13068 117 aa11.86□□□□□ -0.51
LTBP3-208ENST00000527339 GAGE5Q13069 117 aa11.86□□□□□ -0.51
LTBP3-208ENST00000527339 ZNF56Q15929 161 aa11.86□□□□□ -0.51
LTBP3-208ENST00000527339 GAGE13Q4V321 117 aa11.86□□□□□ -0.51
LTBP3-208ENST00000527339 CT83Q5H943 113 aa11.86□□□□□ -0.51
LTBP3-208ENST00000527339 WDR73Q6P4I2 378 aa11.86□□□□□ -0.51
LTBP3-208ENST00000527339 A8MWL6 223 aa11.85□□□□□ -0.51
LTBP3-208ENST00000527339 TMEM241Q24JQ0 296 aa11.85□□□□□ -0.51
LTBP3-208ENST00000527339 CNFNQ9BYD5 112 aa11.85□□□□□ -0.51
LTBP3-208ENST00000527339 GTSF1LQ9H1H1 148 aa11.85□□□□□ -0.51
LTBP3-208ENST00000527339 Q9UF83 564 aa11.85□□□□□ -0.51
LTBP3-208ENST00000527339 KIF25-AS1Q9Y6Z4 181 aa11.85□□□□□ -0.51
LTBP3-208ENST00000527339 TRGC1P0CF51 173 aa11.84□□□□□ -0.51
LTBP3-208ENST00000527339 WFDC10BQ8IUB3 73 aa11.84□□□□□ -0.51
LTBP3-208ENST00000527339 C6orf223Q8N319 242 aa11.84□□□□□ -0.51
LTBP3-208ENST00000527339 KRTAP1-5Q9BYS1 174 aa11.84□□□□□ -0.51
LTBP3-208ENST00000527339 OSTCQ9NRP0 149 aa11.84□□□□□ -0.51
LTBP3-208ENST00000527339 MSRB1Q9NZV6 116 aa11.84□□□□□ -0.51
LTBP3-208ENST00000527339 NAT8Q9UHE5 227 aa11.84□□□□□ -0.51
LTBP3-208ENST00000527339 NTF3P20783 257 aa11.83□□□□□ -0.52
LTBP3-208ENST00000527339 RPL36AP83881 106 aaKnown RBP11.83□□□□□ -0.52
LTBP3-208ENST00000527339 LELP1Q5T871 98 aa11.83□□□□□ -0.52
LTBP3-208ENST00000527339 GTSF1Q8WW33 167 aa11.83□□□□□ -0.52
LTBP3-208ENST00000527339 RPL36ALQ969Q0 106 aaKnown RBP11.83□□□□□ -0.52
LTBP3-208ENST00000527339 TRAV8-6A0A0B4J262 113 aa11.82□□□□□ -0.52
LTBP3-208ENST00000527339 F5H697 171 aa11.82□□□□□ -0.52
LTBP3-208ENST00000527339 BTF3P20290 206 aaKnown RBP11.82□□□□□ -0.52
LTBP3-208ENST00000527339 LINC00315P59091 139 aa11.82□□□□□ -0.52
LTBP3-208ENST00000527339 RPL23P62829 140 aaKnown RBP11.82□□□□□ -0.52
LTBP3-208ENST00000527339 CLLU1Q5K131 121 aa11.82□□□□□ -0.52
LTBP3-208ENST00000527339 C15orf54Q8N8G6 183 aa11.82□□□□□ -0.52
LTBP3-208ENST00000527339 OR10G8Q8NGN5 311 aa11.82□□□□□ -0.52
LTBP3-208ENST00000527339 ISOC2Q96AB3 205 aa11.82□□□□□ -0.52
LTBP3-208ENST00000527339 APOBP04114 4563 aaKnown RBP11.82□□□□□ -0.52
LTBP3-208ENST00000527339 TRBV7-3A0A075B6L6 115 aa11.81□□□□□ -0.52
LTBP3-208ENST00000527339 K7EP13 123 aa11.81□□□□□ -0.52
LTBP3-208ENST00000527339 DNAH10OSP0CZ25 163 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms